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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95475_evm1 >transcript:BL95475_evm1-protein ID=transcript:BL95475_evm1-protein|Name=transcript:BL95475_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=298bp
MDGKTVIVTGSNTGTGKEAARDLARRGARVILACRNARKAEKAAEDIRRS
SGNGNVEVRVLDLASLSSVRDFCTHILQTEPRLDVLVNNAGFSPILRIRS
NICYCPRMETTDGFELMFGVNHLGHFLLTNLLLDLLKKSAPSRVVTVSSG
GHALEPRIDFKDINFQHNFSPTQAYRRSKLANMLFVRELTKRLEGTGVAA
FSMTPGYVANPTSRLTNQTLSVGMLFWGTVAALHRWMYGKTPLQGAQTTI
HCSVADGLQSRSGQYFSDCKPKDPAPQAMDDEAARKLWELSEKMVALK Run BLAST on NCBI mRNA from alignment at Sc0000047:1627512..1629855+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95475_evm1 ID=transcript:BL95475_evm1|Name=transcript:BL95475_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2344bp|location=Sequence derived from alignment at Sc0000047:1627512..1629855+ (Branchiostoma lanceolatum)
ATGGACGGGAAGACTGTGATCGTGACAGGCTCTAACACAGGTACAGGGAA
GGAGGCGGCACGGGACCTCGCGCGAAGAGGTGAGTTGTAGGATGATATTC
TCTCATGTGTTTTCCCGTCTTCGATAATGTTAGTATATGTATCTTAGTAT
AAGCGGCGATTCATCGTGATATGCTGCAACTGTTTGAAAATTGACAATTT
TTGGCATATTTAACTATTTACTTATTCATCGGTTTAGCTGTTCAGCACAC
ACAGCCAGGGTTGCCCAACTCGCCTGCTGCCCTTACACAGTGCTAGCCCT
GCAAGTTTTGGCATACAAGTTGAAGTTAACTCTGACAAAGCTATTGGCAA
AATTACACTTCTTTCATGTAGGACGGTCACTCATCGGATCCTTTTTCTGT
TTATCCCCCAGGAGCTCGCGTGATCCTTGCTTGTCGGAACGCGAGGAAGG
CAGAGAAAGCCGCTGAAGACATCCGTAGGTCCAGCGGCAACGGAAATGTG
GAGGTGCGAGTTTTGGACCTGGCGTCTCTGTCCTCTGTCCGAGACTTCTG
CACCCACATCCTACAGACAGAACCGAGACTGGACGTACTCGTCAACAATG
CAGGTAAGAATCGTGTCCGGAGAAGACCTGGATTATATCACGTTAAGCAA
TGAGGTTCTATCTAACTGTTGAATTGATAGTGTGCGTCTGAAATATTTTG
CGAATTGAAACCGTTTCCCGTGCAAACGCAAAATATATATGTTGTTTTTC
AGGATTTTCTCCAATATTAAGAATTCGAAGTAACATCTGCTACTGTCCCA
GAATGGAAACCACCGACGGGTTTGAGTTGATGTTCGGAGTGAACCACTTG
GGCCACTTCCTCCTCACCAACCTCCTCCTGGACCTGCTGAAGAAGTCTGC
TCCCAGCCGGGTCGTCACAGTGTCTTCAGGGGGACATGCTCTTGAACCAC
GGATAGATTTCAAGGACATCAATTTCCAGCACAACTTCTCCCCCACCCAG
GCCTACAGGAGGAGTAAACTGGCAAACATGCTGTTTGTGAGGGAACTGAC
GAAGAGATTAGAAGGTTGGTAGCAAGTAGCTGAAGCCTAGTAATGCTGCT
ATTAAATCGGATGTTGCTTGAAAACTCGCAACCAGGCCGTTACAAAGATG
TGGTGAGTTTGTACTATATTGCCATCTTAAGTCATGAGGTTGGTCGGAGA
AACAGAAGTGACCAATAATCCAAGGAGACTGACATGTCAACAAATGCTGC
TATAAAAGGCGACAAGTATAAGTCAATACGAATGCCGGGCGTTTCGGCAC
CTTACAGTTCGGCTACCAGCCGATCAGGATGATTCAGCACCAAGCCTAGG
ACGTTCGGACTGTTTCTAGACGTTTTGTAGTTAAGAGGACGCCGAACTCT
AAGCCTAACCCCACTTTTAACCCTAATCATAACTCGAGTCGTCCTGGACC
TGGTACCGAAACGTCCTGATACCTCTCCTACAGGGACTGGCGTTGCAGCC
TTCTCCATGACACCCGGCTACGTGGCGAACCCGACATCCCGGCTGACCAA
CCAGACCCTGTCCGTCGGGATGCTGTTTTGGGGGACTGTTGCGGCGCTGC
ACAGGTGGATGTACGGGAAGACTCCCCTGCAGGGCGCACAGACGACCATC
CACTGCAGCGTGGCAGACGGGCTGCAGTCTAGATCTGGGCAGTACTTCAG
GTACGACAGGCAAGGACCAGTGCGGTCATTATAATGTCTTTATTCCCTCT
CTACATAGAACAGCCCAAAATCGATCGGTCAACGAGTCTGCGAGCTCTAA
AAGACATTTTTGGCAGTAATACGCCCGGTGTTCCCTCCATCATTGCGCAG
TTTTAAGGGATCGGCCGATGTTCATAGGTTACCGATCGCGAGTCCCGCTA
GATATGATAGGGCAGATTTTCAGGCGAAAAATACGCGTGACCCTCCTCCG
GACGGACAGGGTGACCTTCTGTCGATCTACGAATACGCCCAAAGCTCGTC
GACTGTGTGACGGAGGTATAAGAAAGATATATAGGACCAAGCGTAAAAAC
ATGTGTATGCATATCTTTTTTTAAGAGGCCCCTTCAATTATCCTGGATAC
CATTGCTGTTCATGAGCTGTCTGCTGTGGTTGAAGCTTGCTGTCATAGCC
TCGAAATTCTAGTTTTATGGAATTAAGTTCAAACCATCTACAACCTGCTC
GCATCTTAGTGTGCAGTCAAGTCATTGGTCTCATGCCATTCCTACAGTGA
CTGCAAGCCGAAGGACCCCGCCCCCCAGGCCATGGATGACGAGGCGGCAA
GGAAGCTGTGGGAACTCAGTGAGAAGATGGTGGCACTTAAATAA Coding sequence (CDS) from alignment at Sc0000047:1627512..1629855+ >transcript:BL95475_evm1 ID=transcript:BL95475_evm1|Name=transcript:BL95475_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4485bp|location=Sequence derived from alignment at Sc0000047:1627512..1629855+ (Branchiostoma lanceolatum)
ATGGACGGGAAGACTGTGATCGTGACAGGCTCTAACACAGGTACAGGGAA
GGAGGCGGCACGGGACCTCGCGCGAAGAGGAGCTCGCGTGATCCTTGCTT
GTCGGAACGCGAGGAAGGCAGAGAAAGCCGCTGAAGACATCCGTAGGTCC
AGCGGCAACGGAAATGTGGAGGTGCGAGTTTTGGACCTGGCGTCTCTGTC
CTCTGTCCGAGACTTCTGCACCCACATCCTACAGACAGAACCGAGACTGG
ACGTACTCGTCAACAATGCAGGATTTTCTCCAATATTAAGAATTCGAAGT
AACATCTGCTACTGTCCCAGAATGGAAACCACCGACGGGTTTGAGTTGAT
GTTCGGAGTGAACCACTTGGGCCACTTCCTCCTCACCAACCTCCTCCTGG
ACCTGCTGAAGAAGTCTGCTCCCAGCCGGGTCGTCACAGTGTCTTCAGGG
GGACATGCTCTTGAACCACGGATAGATTTCAAGGACATCAATTTCCAGCA
CAACTTCTCCCCCACCCAGGCCTACAGGAGGAGTAAACTGGCAAACATGC
TGTTTGTGAGGGAACTGACGAAGAGATTAGAAGGGACTGGCGTTGCAGCC
TTCTCCATGACACCCGGCTACGTGGCGAACCCGACATCCCGGCTGACCAA
CCAGACCCTGTCCGTCGGGATGCTGTTTTGGGGGACTGTTGCGGCGCTGC
ACAGGTGGATGTACGGGAAGACTCCCCTGCAGGGCGCACAGACGACCATC
CACTGCAGCGTGGCAGACGGGCTGCAGTCTAGATCTGGGCAGTACTTCAG
TGACTGCAAGCCGAAGGACCCCGCCCCCCAGGCCATGGATGACGAGGCGG
CAAGGAAGCTGTGGGAACTCAGTGAGAAGATGGTGGCACTTAAATAAATG
GACGGGAAGACTGTGATCGTGACAGGCTCTAACACAGGTACAGGGAAGGA
GGCGGCACGGGACCTCGCGCGAAGAGGAGCTCGCGTGATCCTTGCTTGTC
GGAACGCGAGGAAGGCAGAGAAAGCCGCTGAAGACATCCGTAGGTCCAGC
GGCAACGGAAATGTGGAGGTGCGAGTTTTGGACCTGGCGTCTCTGTCCTC
TGTCCGAGACTTCTGCACCCACATCCTACAGACAGAACCGAGACTGGACG
TACTCGTCAACAATGCAGGATTTTCTCCAATATTAAGAATTCGAAGTAAC
ATCTGCTACTGTCCCAGAATGGAAACCACCGACGGGTTTGAGTTGATGTT
CGGAGTGAACCACTTGGGCCACTTCCTCCTCACCAACCTCCTCCTGGACC
TGCTGAAGAAGTCTGCTCCCAGCCGGGTCGTCACAGTGTCTTCAGGGGGA
CATGCTCTTGAACCACGGATAGATTTCAAGGACATCAATTTCCAGCACAA
CTTCTCCCCCACCCAGGCCTACAGGAGGAGTAAACTGGCAAACATGCTGT
TTGTGAGGGAACTGACGAAGAGATTAGAAGGGACTGGCGTTGCAGCCTTC
TCCATGACACCCGGCTACGTGGCGAACCCGACATCCCGGCTGACCAACCA
GACCCTGTCCGTCGGGATGCTGTTTTGGGGGACTGTTGCGGCGCTGCACA
GGTGGATGTACGGGAAGACTCCCCTGCAGGGCGCACAGACGACCATCCAC
TGCAGCGTGGCAGACGGGCTGCAGTCTAGATCTGGGCAGTACTTCAGTGA
CTGCAAGCCGAAGGACCCCGCCCCCCAGGCCATGGATGACGAGGCGGCAA
GGAAGCTGTGGGAACTCAGTGAGAAGATGGTGGCACTTAAATAAATGGAC
GGGAAGACTGTGATCGTGACAGGCTCTAACACAGGTACAGGGAAGGAGGC
GGCACGGGACCTCGCGCGAAGAGGAGCTCGCGTGATCCTTGCTTGTCGGA
ACGCGAGGAAGGCAGAGAAAGCCGCTGAAGACATCCGTAGGTCCAGCGGC
AACGGAAATGTGGAGGTGCGAGTTTTGGACCTGGCGTCTCTGTCCTCTGT
CCGAGACTTCTGCACCCACATCCTACAGACAGAACCGAGACTGGACGTAC
TCGTCAACAATGCAGGATTTTCTCCAATATTAAGAATTCGAAGTAACATC
TGCTACTGTCCCAGAATGGAAACCACCGACGGGTTTGAGTTGATGTTCGG
AGTGAACCACTTGGGCCACTTCCTCCTCACCAACCTCCTCCTGGACCTGC
TGAAGAAGTCTGCTCCCAGCCGGGTCGTCACAGTGTCTTCAGGGGGACAT
GCTCTTGAACCACGGATAGATTTCAAGGACATCAATTTCCAGCACAACTT
CTCCCCCACCCAGGCCTACAGGAGGAGTAAACTGGCAAACATGCTGTTTG
TGAGGGAACTGACGAAGAGATTAGAAGGGACTGGCGTTGCAGCCTTCTCC
ATGACACCCGGCTACGTGGCGAACCCGACATCCCGGCTGACCAACCAGAC
CCTGTCCGTCGGGATGCTGTTTTGGGGGACTGTTGCGGCGCTGCACAGGT
GGATGTACGGGAAGACTCCCCTGCAGGGCGCACAGACGACCATCCACTGC
AGCGTGGCAGACGGGCTGCAGTCTAGATCTGGGCAGTACTTCAGTGACTG
CAAGCCGAAGGACCCCGCCCCCCAGGCCATGGATGACGAGGCGGCAAGGA
AGCTGTGGGAACTCAGTGAGAAGATGGTGGCACTTAAATAAATGGACGGG
AAGACTGTGATCGTGACAGGCTCTAACACAGGTACAGGGAAGGAGGCGGC
ACGGGACCTCGCGCGAAGAGGAGCTCGCGTGATCCTTGCTTGTCGGAACG
CGAGGAAGGCAGAGAAAGCCGCTGAAGACATCCGTAGGTCCAGCGGCAAC
GGAAATGTGGAGGTGCGAGTTTTGGACCTGGCGTCTCTGTCCTCTGTCCG
AGACTTCTGCACCCACATCCTACAGACAGAACCGAGACTGGACGTACTCG
TCAACAATGCAGGATTTTCTCCAATATTAAGAATTCGAAGTAACATCTGC
TACTGTCCCAGAATGGAAACCACCGACGGGTTTGAGTTGATGTTCGGAGT
GAACCACTTGGGCCACTTCCTCCTCACCAACCTCCTCCTGGACCTGCTGA
AGAAGTCTGCTCCCAGCCGGGTCGTCACAGTGTCTTCAGGGGGACATGCT
CTTGAACCACGGATAGATTTCAAGGACATCAATTTCCAGCACAACTTCTC
CCCCACCCAGGCCTACAGGAGGAGTAAACTGGCAAACATGCTGTTTGTGA
GGGAACTGACGAAGAGATTAGAAGGGACTGGCGTTGCAGCCTTCTCCATG
ACACCCGGCTACGTGGCGAACCCGACATCCCGGCTGACCAACCAGACCCT
GTCCGTCGGGATGCTGTTTTGGGGGACTGTTGCGGCGCTGCACAGGTGGA
TGTACGGGAAGACTCCCCTGCAGGGCGCACAGACGACCATCCACTGCAGC
GTGGCAGACGGGCTGCAGTCTAGATCTGGGCAGTACTTCAGTGACTGCAA
GCCGAAGGACCCCGCCCCCCAGGCCATGGATGACGAGGCGGCAAGGAAGC
TGTGGGAACTCAGTGAGAAGATGGTGGCACTTAAATAAATGGACGGGAAG
ACTGTGATCGTGACAGGCTCTAACACAGGTACAGGGAAGGAGGCGGCACG
GGACCTCGCGCGAAGAGGAGCTCGCGTGATCCTTGCTTGTCGGAACGCGA
GGAAGGCAGAGAAAGCCGCTGAAGACATCCGTAGGTCCAGCGGCAACGGA
AATGTGGAGGTGCGAGTTTTGGACCTGGCGTCTCTGTCCTCTGTCCGAGA
CTTCTGCACCCACATCCTACAGACAGAACCGAGACTGGACGTACTCGTCA
ACAATGCAGGATTTTCTCCAATATTAAGAATTCGAAGTAACATCTGCTAC
TGTCCCAGAATGGAAACCACCGACGGGTTTGAGTTGATGTTCGGAGTGAA
CCACTTGGGCCACTTCCTCCTCACCAACCTCCTCCTGGACCTGCTGAAGA
AGTCTGCTCCCAGCCGGGTCGTCACAGTGTCTTCAGGGGGACATGCTCTT
GAACCACGGATAGATTTCAAGGACATCAATTTCCAGCACAACTTCTCCCC
CACCCAGGCCTACAGGAGGAGTAAACTGGCAAACATGCTGTTTGTGAGGG
AACTGACGAAGAGATTAGAAGGGACTGGCGTTGCAGCCTTCTCCATGACA
CCCGGCTACGTGGCGAACCCGACATCCCGGCTGACCAACCAGACCCTGTC
CGTCGGGATGCTGTTTTGGGGGACTGTTGCGGCGCTGCACAGGTGGATGT
ACGGGAAGACTCCCCTGCAGGGCGCACAGACGACCATCCACTGCAGCGTG
GCAGACGGGCTGCAGTCTAGATCTGGGCAGTACTTCAGTGACTGCAAGCC
GAAGGACCCCGCCCCCCAGGCCATGGATGACGAGGCGGCAAGGAAGCTGT
GGGAACTCAGTGAGAAGATGGTGGCACTTAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000047 | genome | Sc0000047:1627512..1629855 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95475_evm1 |
| Biotype | protein_coding |
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