transcript:BL95756_evm1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95756_evm1
Unique Nametranscript:BL95756_evm1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95756_evm1

>transcript:BL95756_evm1-protein ID=transcript:BL95756_evm1-protein|Name=transcript:BL95756_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=110bp
MRGVCTLLLLLCGSTCLLASAIPKEEILGAVRDFQHSTHDAGDFTHQASL
DVHGRFNLLWKFDSETITFEAHAQTTGYIGLGLSPNGGMEGSDVIIGWVK
DGQPFITVNK
Run BLAST on NCBI

mRNA from alignment at Sc0000109:266906..268359+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95756_evm1 ID=transcript:BL95756_evm1|Name=transcript:BL95756_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1454bp|location=Sequence derived from alignment at Sc0000109:266906..268359+ (Branchiostoma lanceolatum)
ATGCGGGGAGTTTGTACCCTCCTCCTACTGCTGTGTGGCAGCACTTGTCT GCTTGCCTCAGCCATACCCAAAGAAGAGGTGAGTGGGAAGATTTATATTT TCTTTTTACTGCTCCTGTTGGATGTTAAAACTTTTTTTGGATTTATAACG TTACCAGAGTTTTCAATCAAATATATGAATAACAAGAGGTAAGTGAGGAT ATCTATATTTTGAGACGATTTTGAGTCAATACTTTATACTGCTCCTGTTG AACCTTGAAAGATTTATCTAACTCTTTATTTTAACTCTATACTAAATTAT AGAAAGAATATACTAAAAAAAGAGGTGAGCAGGAAGACTGATATTTTGAG ACGACTTTCGTCAATACTTTCTGCTGCTCGTGTTAAAACTTAAAAGATTT ATACAGAAGTTTCAAAACAAACACGTCAACAGCAAATGGCTTGCCATGGT ATTCACGGGAGTTAAGGACTATGATATGAACGAGAGCAGTTCGGGCCGGT TGACCAAGTAAAGCTCTGTTTCTTGTAAGTTTGTATTTTCAATGCGATGC GTGGTATACTATACGATCGAATGTACGTAGTACAAAATTTGTAGAACATG AGTGCCACATTGCATGCTGTGCTTCTCGTCATCATCTGTGATACTGGACT GAAAGGGAATATTCTGAATGAATGATCTGTCGTTCTTCTTTCCCGTCCGC AGATCCTTGGCGCTGTCAGGGACTTCCAGCACTCTACCCATGGTAAGAAA CAACATAAAATGGAACCATTCTGTCAAAGTAAACTTCTGTTGAGTCTTCA ACCTGTAACACGGTGGCCTCGGGGTTAGGGTTGTTGACTCAGAACTTGGG GGTACTGAGTTTCAATCCCTGACACACCCCGACCAATCGATCGCTTTGAA ACTCAGATTCGAATCATCCATGACCAGAAAAATCGCTTTCTAAGTTGCCT TAACGACTTAATCTGACAAAACGAACTCGCCAGTGAGATGCTGGGAGGTG TCAGGTTTTAAAAGATGCTTTCAGATTGACAATTTTGGCACTTTCGAAGT GATAGAAAGTGACCTCGATTAAACGTTAAAAAATTGTTTCTACTACGAGG TGGTTGCCGGTTATGTAATACAAACGATACAACACAATACAAGCACATAT TATTGGAATAAAAATAGTTGAAGATCACGTCTGACAATATAAAATGCATT TGTGGCTTCTTGTTCAATTTTGATTGTAACCAACATCAGACGCCGGAGAT TTCACCCACCAGGCCTCTCTAGACGTGCACGGCCGGTTCAACCTGCTGTG GAAGTTCGACAGCGAGACCATCACGTTCGAGGCGCATGCGCAGACCACGG GGTACATCGGACTCGGCTTGTCGCCCAATGGTGGCATGGAAGGATCTGAC GTCATCATCGGATGGGTGAAGGACGGACAGCCCTTTATAACGGTAAATAA GTAA

Coding sequence (CDS) from alignment at Sc0000109:266906..268359+

>transcript:BL95756_evm1 ID=transcript:BL95756_evm1|Name=transcript:BL95756_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=333bp|location=Sequence derived from alignment at Sc0000109:266906..268359+ (Branchiostoma lanceolatum)
ATGCGGGGAGTTTGTACCCTCCTCCTACTGCTGTGTGGCAGCACTTGTCT
GCTTGCCTCAGCCATACCCAAAGAAGAGATCCTTGGCGCTGTCAGGGACT
TCCAGCACTCTACCCATGACGCCGGAGATTTCACCCACCAGGCCTCTCTA
GACGTGCACGGCCGGTTCAACCTGCTGTGGAAGTTCGACAGCGAGACCAT
CACGTTCGAGGCGCATGCGCAGACCACGGGGTACATCGGACTCGGCTTGT
CGCCCAATGGTGGCATGGAAGGATCTGACGTCATCATCGGATGGGTGAAG
GACGGACAGCCCTTTATAACGGTAAATAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95756gene:BL95756Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95756_evm1-E1BL95756_evm1-E1-1564476830-311249Branchiostoma lanceolatumexon
BL95756_evm1-E2BL95756_evm1-E2-1564476830-311251Branchiostoma lanceolatumexon
BL95756_evm1-E3BL95756_evm1-E3-1564476830-311253Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95756_evm1transcript:BL95756_evm1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000109genomeSc0000109:266906..268359 +
Properties
Property NameValue
Transcript idBL95756_evm1
Biotypeprotein_coding