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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95769_evm1 >transcript:BL95769_evm1-protein ID=transcript:BL95769_evm1-protein|Name=transcript:BL95769_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=678bp
MAASCTRIFSKGVKLTPSLVKLGHGTRLPLRNTTLTFHRSHLSTRNGNFW
RVCGVFVRGNAWGGRGAAVASGCGAGVFLAAGVAYCYGSRGADNXWRVFV
RGNAWGGRGAAVASGCGAGVFLAAGVAYCYGSRGADNHSQLFTAAKRNDV
TEIKRLAEIGVDVNQRHILGWTPLMVAAVSGNLGAVKALLEAGADPNMRE
EFVNVYQTAREKGMHSLDVLVTREDEFSNRLNNRASFRGCTALHYAVLTD
DVHIVKALLEAGADPTMENDSGHAAGLYAHNLEVKRLLEEYKDKYAELQR
QKQVEERRKFPLEERLREHIIGQEGAITTVSAAIRRKENGWYDEDHPLVF
LFLGSSGIGKTELAKQIARYMHKDVKKGFVRMDMSEYQEKHEVAKFIGSP
PGYVGHEQGGQLTKKLKQCPNAMVLFDEVEKAHPDVLTIMLQLFDEGRLT
DGKGKTVECKDAIFVMTSNLASEVIADHGLQLRKEAQEVWAQRRQDTGDD
DVLLTEKITISRQFKEKVVYPILKRSFRRDEFIGRINEIVYFLPFSQSEL
VKLVTKEMEFWANRAMNKHKITLLWDRQVLDVLADGYDVHYGARSIKHEV
ERRVVNQVAVAHERGLIHPGCTLRIAVDNPNDVMAKNDNKEPEKLPVIKL
QLVKEGSKSVDLNLPRVPDDRDTTWSNF Run BLAST on NCBI mRNA from alignment at Sc0000115:72904..79795- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95769_evm1 ID=transcript:BL95769_evm1|Name=transcript:BL95769_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=6892bp|location=Sequence derived from alignment at Sc0000115:72904..79795- (Branchiostoma lanceolatum)
ATGGCGGCGTCCTGTACTAGAATTTTCTCGAAAGGCGTGAAACTTACCCC
AAGTCTGGTCAAACTAGGACATGGTACACGCCTGCCACTGAGAAACACCA
CGTTAACATTCCATAGATCTCACCTGTCTACACGAAACGGGAATTTTTGG
CGTGTTTGTGGTGTTTTTGTTCGCGGAAACGCTTGGGGTGGGAGGGGGGC
AGCTGTTGCGTCAGGGTGCGGAGCTGGTGTGTTCCTGGCGGCTGGTGTTG
CCTACTGTTATGGAAGCCGTGGCGCCGACAACNTTTGGCGTGTTTTTGTT
CGCGGAAACGCTTGGGGTGGGAGGGGGGCAGCTGTTGCGTCAGGGTGCGG
AGCTGGTGTGTTCCTGGCGGCTGGTGTTGCCTACTGTTATGGAAGCCGTG
GCGCCGACAACCGTACGTACACATGTGTATTACATCATCTCCTAGTAGCA
GAGGTAAAGACGTAGACATATACATTTTGCGATTTTTGTAATACAGTTTT
CAGTGAGGCTATGACAACTGATGAGTGATAGTCGAAAAGGATCGAGCTAA
CGTTCACATGGACAGTTGTTCATATAACAACGAACTAGTATTAAACTTGA
ACAGTATGACGATTGTGCGATACAGACGTGAAAGTGCAACATGCGTATGG
TAGTACGTAATTGGTCCAATGTGGGAGATTTGAAAAGTCTACATTATATG
TCAGTTTTACAGTGTAATGTACAGGTGGATTTACTTTCCTTTGCCACAGA
TTCCCAGCTATTTACAGCAGCAAAGCGTAATGATGTCACAGAAATAAAAC
GGTAAGAAATCATCATAAGCTACCTCTGTCACTTCTGCAGCACCAATACT
ACAATACTAAAATACACATAGCCTTAAGTTAAGAACCATCCAAGAACCAA
GGAAGTAAATTCCTGTGGCCTATACAAAATGCTAATGCAAGATGAGCCCT
ATAATTTGCAGCATTCACTGTTATTCCAGTCAAACCTGCACAAGATGACC
ACCTGGGGTTAGGACAAAAGCAGTCGTTTTGGACAGTTAGTAGGCTTGAA
GAGGTGGTTGCTTGGTTTGACTGTACATTTGTATTACTACAGCAAAGTGT
CTCGGAGTTGAATTGGAAGAAGTGTTACATGTCTTAGATCTATGAAGTAT
CTTCCAAATTATTTCCATTACATTTGTAGACTGGCAGAGATTGGAGTTGA
TGTGAACCAGCGACACATTTTAGGATGGACTCCACTGATGGTCGCAGCTG
TCAGTGGGAACTTAGGGTAAGCAAATGTGAAAGGGATCTTGAACCAATTA
AGCTCACTTCAGGTAAGCAGAGGGACCTGATATTAGTGGATTACGTGTGT
CCCGGTGTGTCTGTATTTTGGCATCATTGTGTGAAGGTGATGACAAATGA
AAAAGAAACTTCTGAACTTTGTTCACTTCAACTTTGTACAAGTTTGTACA
AACTTAACTTTATCCAGATGGAAAAGGTCAGGAATTGCAAGAAATCTTAC
TTCATTAAAGATTCACAATGGTTAACATTAGCTCTTACAAGCTCCTTATT
GCTCGATTAGTTTTTGCCCATTTTTCCCAGGCTTACATTTACAAGTGGGT
CAAGTGGCTGTCATCTGCAGTTATATCTGTAATGCTACACAATGTATGTA
AGCATACTATATTAGGCAGTTCTTACCAAGCATTGATTCTTAATCTAGCT
CTGCAGCTCTACAAAGGGTTGCTATTAGGGAAGCAATTTGAACATCACAA
GTTGTTTGGGCAGGAAGGGCAATGAAATGTCATTTTCTCTCCTGAAGTAT
GCATTTCAGTCGGACATTCTTCATGCAGTTTGAAATGCCCACCTGCAACT
TGCAGAAAACCTTCTCTGGCCACTGGACATTTCAAATCAACATTTTTCTT
TCATAAACTACGACAGGGCAGTAAAGGCCCTACTGGAGGCTGGTGCTGAC
CCCAACATGAGAGAGGAGTTCGTCAACGTTTACCAGACTGCACGAGAGAA
AGGAATGCATTCATTGGATGGTAAGTTTCCCTTGCCTTGGAACCATGATC
TTGGTTCCTTAATGTTTGTTGTACCTGTACCTGTATTGTTCAATTGATAT
AACCACCTATTATATCATGTGTATGACAAGAACTTATTCTCCTTCTGCTG
CTGCAGTTCTTGTGACCAGAGAAGATGAGTTTAGTAACCGGCTGAACAAC
CGAGCCAGTTTCCGGGGATGCACAGCTCTGCACTACGCAGTATTGACAGA
TGATGTACACATCGTCAAGGCGCTCTTGGAAGCTGGTATTTATTATGAAA
GCAACAATGTACTTCCTTCTTTGAATCTGGATATATTTCCTCCTTGAAAC
TGTGTGAGCCAAGACACAAAACTCGTACATTCTTTTATGTTGGCCTTCCT
GTTCAGCATTATTGAGAAAAAAGCAAACTGACAATTGAATTGCTGTGGCC
TGAAATGAAGTCAAGGTGTTATCAATCAATAATGTATAGATGTGTTTTTG
CTGGCCTTGGTGCATAAGATGAAGTTAACACGTGATTTATGTGATTGTAG
AAATGTATGTTCGCTCCCCCAGGTGCAGATCCCACCATGGAAAATGACAG
TGGCCATGCCGCTGGCCTGTATGCACACAACTTGGAGGTCAAAAGACTCC
TGGAGGAATATAAAGACAAGGTGAGAGTTTCACTTCTTTCTTACATTTTC
TTGCACGTGGTTGGTTGATAGTGCATGCATAAATTGGAAGAAAAGAGTCT
CCCAAATATGTATGATAACATCAAAATAAGTCGTTCGACCAATAAGGGAG
TGATGGCATGTTGGCCAAAATCTTTCATTACTAGACTTTTGTTTTTCATT
TTTATGTTTTGACCACTTATTGGCCAGGCTATGGGTTTGGACTGTTTAGC
CGACAAATATGTACAAAATCATGTGCTCTAAACAACACACAGAAACTAAT
CTTTGGTTTAATTTTGAGATTAGATTTTGTTGGCATGTTGCATATCATTA
ATCTCTTTCTGTCCCTGGCAGTATGCGGAGCTGCAGAGACAAAAGCAAGT
GGAGGAGAGGAGAAAGTTTCCCCTTGAGGAGCGGCTACGGGAGCACATCA
TTGGACAGGAGGGAGCCATCACTACAGTTTCTGCAGGTTGGAACAGAGCT
TGTTACAAAATAAGTTTGGAACCTTGAGTTCATTTGATAAAATACCTCCT
TTGTTTCTTTATCATTAACTGGGAAAATCCCATTCATACCCCATGTGACC
ATCTGTAATGATCTTACAATTTTTTGGGCAAGCATCTTGGCTGAGTTGCA
AATACATGTGAAAAGAGCCCAATTTCCTTTTGTATTCATCCTCTTTGTTC
CTATTCACTCAGGTCCCAATCAGGTTTACTGACAAAAGAAGCAGATTGAT
ACTGTTGACTTTCAGTTAATTTTTGATATGTTCTTCTAATCTTCTTCCTA
CCTCAGCCATCAGAAGAAAGGAGAATGGCTGGTATGACGAGGACCATCCC
CTGGTGTTCCTGTTCCTTGGGTCATCAGGAATAGGTAATTACTTCACCCC
CAAGGGCTTGCCTTTCTTTGCATGTGTGTCTGTCTGTGTGTTTTGGTTTT
AGTTATGTATTTCATGCTATCCTTGTCAAGTTGCTGCTACCTGGGTAGTT
ATAATAAAAATTGAAAAAAAGATATAATATACAGATGACACAACTAGATA
CAGAATAGATGTACTTTGTGGACATCAAAGTTGGTTGACTCAGATATGTT
GCAGCTGATATGTTATCTCCCTTTAACAGGTAAAACAGAACTGGCCAAGC
AGATAGCCAGGTACATGCACAAAGATGTGAAGAAGGTAATTTATAATATC
ATGTCTTTTGTAGGAAATATTTATATGCCATTTCTGTAATGTTCATTCTC
CAGAAAATTGCAGATCAGACCACAGCATTTGATATTTTGATTCATTCATC
ATTAAAGTTATATGTTAAATGTGTCGATCATTATATCAATGATGAGGTTT
GTGAAAATTCAGTTCTTTCTTAAATGACACACACCCTTTCTCTGCAGGGG
TTTGTTCGGATGGACATGTCTGAGTACCAGGAGAAACATGAGGTGAGGAA
TTTTGTCTCTTTCATCCATTGGTCAACTAATGAAAAGATAAAATGTGACC
CACATCCCTGAAGGCACCTTGAGTATAATCTCAGGGGTAATCATTTGTTT
AAGATATTATAGCTCAAAGTACTCTGACTGTAATGCATTTTGTATTACAC
TTTGCGCCCAAACCACAGGTTGCAAAGTTTATCGGATCGCCGCCGGGGTA
CGTGGGACATGAGCAGGGGGGCCAGCTGACTAAGAAGCTGAAGCAGTGTC
CCAACGCCATGGTGCTGTTTGATGAGGTGGAGAAAGCGCACCCCGACGTC
CTCACGATCATGCTCCAGCTATTTGATGAGGTGGGATTTGTTTATTTGAG
TTTATCATGTGAAAGGGAGGGCAAGACAGGCACACCTTTACAAGTTGCCC
TCCCGCACACGATAACTTAGTAAAAGCAACATTGACGGTACTTTAACGAT
ATATTACTACTAGTAAGTCAATTATATCAACAAAATGTACAGAGCAGGTT
ATGAAATNACAGATCAGGTTATGAAATAGTGAAGCGGGATTGACACATTC
ATTTCCTTTCTTATTGGACATTTTGAAGTAAAAATCAAGTAATACAGCAA
GATATACATGTAAACAGAGGACTGCGAGGAAATCTGGTATCTTGCATCAT
ACATTCATTCTCGGAAATTTGTGTCTGCAAAGTATACAGACTCAGTTTTC
ATGTTGATTTTCCACTTCATGATTTTTTCCAAATGTTCTTTTCAATCCAA
GAATAAAATAAATTGTTGTGGCCTTGTCATTGTTACAATAGGGAAGGCTT
ACCGATGGAAAGGGAAAGACTGTAGAGTGCAAGGATGCTATCTTTGTCAT
GACCTCCAACCTTGCCAGCGAAGTGATCGCGGACCACGGGCTTCAACTGC
GTAAGGAGGCACAGGAGGTCTGGGCGCAGAGACGACAGGACACTGGTGGT
GAGGGTTTTCTGTTGTTTGTTACATTAACTACAGTTTCAAGTGCAAGCTG
TATAAGAATGGACTGATAAGTTAATGCACTCACACTGGGGCACAGAGAAG
ACAGAACAGGTTTATATTCAACAAGAAGGTTGAGTTTTCAGCTACCTGCA
TGGTTTGTTTTGTTTGTGGTTCAGCTGAATTTGCTCTAAAAAACAACTGG
TATATATTTCTACCCCAAAATACAATAGTACTTCTAACTACATGCCTAGG
TAGCTAAGCTATGCCTTGTTCCTGTGTCAGTACCATTGTTGTTGCCCACA
TTTTGAACGTCCCTGTTTTCAGATGATGATGTGTTACTGACTGAGAAGAT
CACCATCTCCAGACAGTTTAAGGAGAAAGTAGTGTATCCCATCTTAAAGG
TAAGATGGATTTCTAATCTAGAAGTCTTAAGGCTAAGCACTCAATATATT
AAATGTCTTTGCTCTTTACAATCATTGGTTGTCAAATTCTCTGTAACTGT
ACTGTACCTACTAGGGGTGGATACCGGTTTGGCTTAATAAGGTCCAAGTC
CAAGTTTAGGTCCAGAGATTTAGGTTCAGGTCCGGACCTGATCCTGTCCA
GTTGATGTTTTGTTTTATTAGACCAATATTAAGCACACAGAAATAATACT
GACACGCACAAGAAAAGTTTCTTGGTCAGAAGACTTTCAGGGTAAACCAG
TGTTTGATATTTGAATGATTCACTTATTTTAAATGCATTTTTTGGAAGAG
GGGAGACTCAAAACACTTTTTATCAAACAAAATAGAAAATATATCTGTAC
TTTGTTCAGGTTTTTTTTGACTCAGCTTTTTGGCTTCAGGTTTTTTGGAC
TCGGTTCTTGGATGTTATAAAGGTCCAAATCAGGTCCAGCAAACCGGTAT
CCACCCCTAGTACCTACTGTAGCTGACCAAGTTTTGTAAGTGATTTTGAA
GAGTAACTATTTTTCAAGTCTGAGAAGTAACAATTGTATGGTCTTAGCAC
AATATTGCTACAAAATCAGTTTGCAATCTTTTTTTCAGAGATCTTTCAGA
AGAGACGAGTTCATTGGTCGGATCAATGAGATTGTGTACTTCCTGCCGTT
CAGCCAATCAGAGCTTGTCAAACTGGTAACCAAGGAGATGGAGTTTTGGG
CCAACAGAGTGAGTATGGGTTATTTTATGGGTAGAACTCATTCTAGATTC
ATAGAAAAGTAGTATTTTTGTTGTGCCATGCCTTTCGTTTACATACATAC
ATCCCTCTGAAGTCTCTCTGTCAATTCTTTCATCTGCCCATTCATCCAAT
CAGCCATTCATCAAATCACCATACTTTGTTGTCCCAGGCTATGAATAAGC
ACAAAATCACCCTGCTGTGGGACAGACAGGTGTTGGATGTGCTGGCCGAT
GGGTACGATGTCCACTATGGAGCCAGGTCTATCAAACATGAGGTTTGTTT
GTTCATTCGTTTGTTTTATTGTTTTAGTTGCCATTCAGCTGTCATTTACA
TGTAGCCATTGTAACAGTGTCCATGATTCGAGGAATAAAATTTTCATAGT
TATAAATAGGTGAAGTTAGAGATTTCTAATTGTGTTGTTTGTACTATCAC
AGGTGGAAAGAAGAGTAGTTAACCAGGTTGCAGTAGCACACGAGAGAGGC
CTGATACACCCAGGTTGCACACTCCGCATCGCCGTGGACAACCCTAATGA
CGTCATGGCAAAGAATGACAACAAGGAGCCCGAGAAACTCCCCGTCATCA
AACTACAGCTTGTTAAAGAGGGGAGCAAAAGTGTGGACTTGAACTTGCCA
AGGGTACCTGATGACAGAGACACAACCTGGTCCAATTTCTAG Coding sequence (CDS) from alignment at Sc0000115:72904..79795- >transcript:BL95769_evm1 ID=transcript:BL95769_evm1|Name=transcript:BL95769_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2037bp|location=Sequence derived from alignment at Sc0000115:72904..79795- (Branchiostoma lanceolatum)
ATGGCGGCGTCCTGTACTAGAATTTTCTCGAAAGGCGTGAAACTTACCCC
AAGTCTGGTCAAACTAGGACATGGTACACGCCTGCCACTGAGAAACACCA
CGTTAACATTCCATAGATCTCACCTGTCTACACGAAACGGGAATTTTTGG
CGTGTTTGTGGTGTTTTTGTTCGCGGAAACGCTTGGGGTGGGAGGGGGGC
AGCTGTTGCGTCAGGGTGCGGAGCTGGTGTGTTCCTGGCGGCTGGTGTTG
CCTACTGTTATGGAAGCCGTGGCGCCGACAACNTTTGGCGTGTTTTTGTT
CGCGGAAACGCTTGGGGTGGGAGGGGGGCAGCTGTTGCGTCAGGGTGCGG
AGCTGGTGTGTTCCTGGCGGCTGGTGTTGCCTACTGTTATGGAAGCCGTG
GCGCCGACAACCATTCCCAGCTATTTACAGCAGCAAAGCGTAATGATGTC
ACAGAAATAAAACGACTGGCAGAGATTGGAGTTGATGTGAACCAGCGACA
CATTTTAGGATGGACTCCACTGATGGTCGCAGCTGTCAGTGGGAACTTAG
GGGCAGTAAAGGCCCTACTGGAGGCTGGTGCTGACCCCAACATGAGAGAG
GAGTTCGTCAACGTTTACCAGACTGCACGAGAGAAAGGAATGCATTCATT
GGATGTTCTTGTGACCAGAGAAGATGAGTTTAGTAACCGGCTGAACAACC
GAGCCAGTTTCCGGGGATGCACAGCTCTGCACTACGCAGTATTGACAGAT
GATGTACACATCGTCAAGGCGCTCTTGGAAGCTGGTGCAGATCCCACCAT
GGAAAATGACAGTGGCCATGCCGCTGGCCTGTATGCACACAACTTGGAGG
TCAAAAGACTCCTGGAGGAATATAAAGACAAGTATGCGGAGCTGCAGAGA
CAAAAGCAAGTGGAGGAGAGGAGAAAGTTTCCCCTTGAGGAGCGGCTACG
GGAGCACATCATTGGACAGGAGGGAGCCATCACTACAGTTTCTGCAGCCA
TCAGAAGAAAGGAGAATGGCTGGTATGACGAGGACCATCCCCTGGTGTTC
CTGTTCCTTGGGTCATCAGGAATAGGTAAAACAGAACTGGCCAAGCAGAT
AGCCAGGTACATGCACAAAGATGTGAAGAAGGGGTTTGTTCGGATGGACA
TGTCTGAGTACCAGGAGAAACATGAGGTTGCAAAGTTTATCGGATCGCCG
CCGGGGTACGTGGGACATGAGCAGGGGGGCCAGCTGACTAAGAAGCTGAA
GCAGTGTCCCAACGCCATGGTGCTGTTTGATGAGGTGGAGAAAGCGCACC
CCGACGTCCTCACGATCATGCTCCAGCTATTTGATGAGGGAAGGCTTACC
GATGGAAAGGGAAAGACTGTAGAGTGCAAGGATGCTATCTTTGTCATGAC
CTCCAACCTTGCCAGCGAAGTGATCGCGGACCACGGGCTTCAACTGCGTA
AGGAGGCACAGGAGGTCTGGGCGCAGAGACGACAGGACACTGGTGATGAT
GATGTGTTACTGACTGAGAAGATCACCATCTCCAGACAGTTTAAGGAGAA
AGTAGTGTATCCCATCTTAAAGAGATCTTTCAGAAGAGACGAGTTCATTG
GTCGGATCAATGAGATTGTGTACTTCCTGCCGTTCAGCCAATCAGAGCTT
GTCAAACTGGTAACCAAGGAGATGGAGTTTTGGGCCAACAGAGCTATGAA
TAAGCACAAAATCACCCTGCTGTGGGACAGACAGGTGTTGGATGTGCTGG
CCGATGGGTACGATGTCCACTATGGAGCCAGGTCTATCAAACATGAGGTG
GAAAGAAGAGTAGTTAACCAGGTTGCAGTAGCACACGAGAGAGGCCTGAT
ACACCCAGGTTGCACACTCCGCATCGCCGTGGACAACCCTAATGACGTCA
TGGCAAAGAATGACAACAAGGAGCCCGAGAAACTCCCCGTCATCAAACTA
CAGCTTGTTAAAGAGGGGAGCAAAAGTGTGGACTTGAACTTGCCAAGGGT
ACCTGATGACAGAGACACAACCTGGTCCAATTTCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000115 | genome | Sc0000115:72904..79795 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95769_evm1 |
| Biotype | protein_coding |
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