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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95771_evm0 >transcript:BL95771_evm0-protein ID=transcript:BL95771_evm0-protein|Name=transcript:BL95771_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=458bp
ANFGSYGATASLTLPIIRSGGQHCLRWFYHMYGSYPGTMNVYVSQPQYPD
MLVWTRSGNRGNQWLSASSPISSNVFQIRFEGVRGWSSSSDMAIDDVVVT
SGPCLACAPNQFTCFDGSCVSSNLTCDGNSDCFDGSDESFCGYTSGCANP
SVLTGSSGNFTSPGYPGNYPNNARCSWLITVNSDKIVDIRFTAFNLGSSS
GCPYGSLAVHDGPNGTSPVLATLCGSSAGSVSTTGNSAFLVFRSDGSVTT
SGFFAAFTAEDPPHTCSPDEFTCWNGDCVNMTLTCDGTRDCTDGSDEIYC
VNVGSKCGVPAIQPTFPIARIVGGNGSRPGSWPWQVYLLRYGSFHCGGSL
IHPLWVLTAAHCVVNDLSSSSYNVILGKYNKSGSITDPTEQRLPVSQIIS
HNGYSTYPTNKDLALLKLARPVTLNQHVWPVCLVSGPGADPPAGTNCVIT
GWGTTQGK Run BLAST on NCBI mRNA from alignment at Sc0000116:523991..528207+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95771_evm0 ID=transcript:BL95771_evm0|Name=transcript:BL95771_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4217bp|location=Sequence derived from alignment at Sc0000116:523991..528207+ (Branchiostoma lanceolatum)
GCCAATTTTGGTTCTTATGGTGCGACTGCCAGTCTGACGTTACCCATCAT
TCGCTCTGGCGGTCAGCACTGCCTGCGGTGGTTCTACCACATGTATGGAT
CATACCCGGGGACAATGAACGTCTATGTCTCTCAACCTCAGTATCCTGAT
ATGTTAGTATGGACAAGGTCTGGAAACCGAGGAAATCAGTGGTTGTCAGC
TTCATCTCCTATTTCCTCAAATGTATTTCAGGTGAGTAGTAAACTTGGCT
CTGTTTGATGCCTGTACTTTTGTAGTTCATACATGTATCTTACCCATGTT
CAAATTTTCCGACGGATCAAGTTCATAGATTGCCTCATTTTTTTGTGGGT
AGATTCAATGCTATCAATGGATTGAAATCATTGAATCTATGTTTAGTGAG
GTCGTGGCGCAACGGCAGAGCTTTCGGCTCACAACCAAGTGGTCCCGGGT
TTGAATCCTGTCTTGTCACCGATCTTGTGCCCTTGGGAAAGGCATTTTAC
ACAACTTTCCTCACTCCACCCAGGTGTAAAAGGGTACCTGACTTTGGTTG
GGGAATGTCGTATTGAGGTCACCTGCTGGCGCCGAATGGCAGCCGCCCAG
ACCCTTGCGACAGTTCCACAAAGTGCAAGTGTGGATAAAAATGTGTATAT
GTTGTGTATTATGTGAAGCCTGAAAACCCTGCATCAATTCAGCGCTAGAA
AGGCTGCCATTGCGGGTAGTTTCTGACCAATAAAAAACATAAAAAACAAA
AGACAATAAGAAGGGAAGAAAACAGGAACAGGCATTATGCTGATCAAATG
TCCATCCTACAGATTCGTTTTGAGGGCGTTAGAGGATGGAGTAGCTCCAG
TGACATGGCTATCGATGACGTTGTTGTAACATCAGGACCCTGCCGTAAGA
CAAGTTTTGTATAAGCAAACGTTTACCTTTGCACATTTCTCCGTTTTATA
ATAAACGCTGCTATTGTTTCACAACTTAAGTTAGTTTCTCTGTACGCATA
CGCTACTTGTATTGAATTTCAGATGTTATGGTGAATATGCAACCATATTA
AATATGTTGTTGTCATATACCACAAGGACATGGATTGCATAATTTTAGTC
ATAAACCGTTCTTCATATTTTTCAACACTTTGGTAAATCACTTCGAAGAT
TGATTAATATTAATTATATTTTGAACAGCTTTAGTTCTCAAATTCTTCGT
TAATTTTAGAAAAGTAAAGAAATTTTTCTTCCATACACATGTCATGATTT
CTGTTTCTATAGTGGCTTGTGCTCCAAATCAGTTTACATGCTTCGATGGA
AGTTGTGTTAGCTCAAACCTGACGTGTGATGGCAATTCTGACTGCTTTGA
TGGAAGTGACGAGTCTTTTTGTGGCTATACAAGTAAGTCATTTGAAGAAA
AAATGACGAATTGTTTCATTTCCGTTCCGTTATATTCTCGATTGTGCTTT
AATCATGTCTTGGTAAGACCGGAAAACTATGCATGCACGTTTTTTTGTCA
ATCGGTTAAGATCAGCATATTCTCATAATTCTGCGACACTTTCCGACTAC
CCTTCACTAGACTGATGAACTGGCTATGCGTCATTCTACCGGCGCAAGAA
AATGTTGACATTTTGTGCTAGTCATCATGTTTGTATGACAACAACACATC
ATGAGGTCAATGAACGGATACAATTCTGTACTACTTTTTGCATGCTCAGA
AATCTGTATGAACATAGTGGGTTTTTTTTTTTACCAGGTGGATGTGCAAA
CCCATCCGTGCTTACGGGATCCTCTGGCAATTTTACGTCTCCTGGTTACC
CTGGCAACTACCCTAACAACGCCCGCTGTTCTTGGCTGATAACCGTCAAT
TCTGACAAGATTGTCGACATCCGGTGGGTGTTATATCTTGCATCTTCGTA
TACGTCTCCTTTCAACATGAATTCGGAATATTTTGAGGTCGCAGAACTCT
AATTTTGAAAGTGTTTTTCCTACATAGTACCATCTTATTGCCTAGAAGAT
AATATGTATATGATTTTTGTAGATTCACAGCGTTCAACTTGGGGAGCTCC
AGCGGTTGTCCTTATGGTTCCCTCGCTGTGCATGATGGGCCCAACGGTAC
TTCTCCTGTGCTTGCCACCCTTTGCGGCTCATCAGCTGGATCAGTCTCCA
CCACTGGGAACAGCGCCTTTCTAGTCTTCAGGAGTGATGGTTCAGTCACG
ACGTCTGGATTTTTCGCCGCCTTCACTGCTGAGGATCCCCCGCGTAAGTG
AAACGTATTGCGTCCGTAGAGTTCCCATCCCACCGTCTCGGACCAGTTTT
CTCTAACAGAATAACAGTTGTTCCTTTTTTTCTTCTCAGGTATACAGCAT
ACCTGTTTCCAGTGGTCAAATTTTATAAGGCTGCACATTCGACTAAATGC
CTAGGCGTCTCGATACTGAGCTATATCATGCAATAACAAGATCTTAGTCG
AAAAAAATTCTTTGAGAAGGTCATGGTATAGCGTAGGTATTTTAGAGTAA
CGATTTTCATCTTTATATAACACAACTAGGCATATCTGTTTTACAGACAC
TTGCTCTCCCGATGAGTTTACATGTTGGAATGGAGACTGTGTTAACATGA
CCCTTACCTGCGACGGCACCAGGGACTGCACTGATGGAAGCGATGAAATC
TATTGTGGTTAGTTTTAGTTAATTTGCTTGTTTGTTTGTTTCTTTGTTTG
TATGTTCTAATGTATCCTATTTCCTTAGGTATTTCCTGCCTGTATATGAC
ATGGTCTTTATTAAATATGACATGTCATATACCTAAAATAATATATATAC
ACGCCAACCTTTATGGTAATTCCAGTACATACTAAGACGCGAGTTCAATA
CAAGTATTAATGGTAATTGGTTGTTGAAATGCAGCAAATTGGTTTCTCGG
GACTATTCCAAAATACTGACATTTTCTAAACAAACCTCGAAAAAAGAATT
TTTGAAGAATAATGCCAGTCATATGAACTAAAACTAGATCTTTGTCTATC
ATACATCCAAATTATACGAGTTAAGATAATCTGAACGTACTGAACAATTT
CCAAAAGTGGTTTGCAGATTTCTGAAAATAACTTGAATAAGAAACCAATG
TTTCTTTGCCCTCCATGTGTACCAGTGAACGTTGGTTCGAAGTGTGGAGT
TCCAGCTATCCAGCCAACCTTTCCCATCGCCCGTATCGTCGGCGGTAACG
GTTCCCGTCCGGGAAGCTGGCCTTGGCAGGTCTACTTGTTACGTTACGGC
TCCTTCCACTGCGGGGGAAGTCTCATCCACCCCCTCTGGGTCCTAACCGC
TGCTCACTGTGTGGTAAATGAGTAAGTATGGTATAAGACACGTCTAATAG
ATTGGAGAGGTTTCGGGTTGTTTGTATCATGGTGGGAATCAGAATACAAG
GGGGGGAATGATAGTAGAACACTTGACACACACAAACACACACACATACC
CGCTCTTTCACACATACGCGTTATACAATTCTACATGTAGAATGCTTGTT
GCAATCGTGCAATAATCATATACCCTTTGATACAGCAGTTTAGATAACCT
GTATTTATGTCTTTCAGTCTATCGTCCAGCAGTTACAACGTTATCCTTGG
CAAGTACAACAAATCCGGATCAATTACCGACCCAACAGAACAACGACTAC
CAGTCTCCCAGGTACGTTTTAGATATGCCAACACAACCACACCTTCATTT
CCATTTTACACTATCAAGACATATCTATCACTTAGTTCACCTAACCAGAC
ATATCATTTTTTTCTGAAAATAAAAAGGCTGTGGAAACACTAGAGGATAG
GATGGATGTTTGGGGCGGTCTTTGTATTTCAACTAGTAATTAGACGTGTT
CTTACAGGTTATCAGTCACAGCGGATACAGCACTAACCCGACAAATAAGG
ACCTGGTCTTACTGAAGCTGGCCCAAAATAGTCGTTCACTACGATTGAAC
CAATCAGATGTTACATAGATGTCAATGCTGATACATTTACTACGTATCTA
TTCGATTTCCATCAAATGCTTGCCGTTACAGATTATCAGTCACAACGGAT
ACAGCACTTACCCGACAAATAAGGACCTGGCTTTACTTAAGCTGGCCCGA
CCGGTGACACTGAACCAGCATGTGTGGCCCGTCTGCCTTGTCTCGGGCCC
TGGAGCTGACCCTCCTGCGGGAACCAACTGCGTCATCACAGGGTGGGGAA
CAACCCAAGGCAAGTGA Coding sequence (CDS) from alignment at Sc0000116:523991..528207+ >transcript:BL95771_evm0 ID=transcript:BL95771_evm0|Name=transcript:BL95771_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1377bp|location=Sequence derived from alignment at Sc0000116:523991..528207+ (Branchiostoma lanceolatum)
GCCAATTTTGGTTCTTATGGTGCGACTGCCAGTCTGACGTTACCCATCAT
TCGCTCTGGCGGTCAGCACTGCCTGCGGTGGTTCTACCACATGTATGGAT
CATACCCGGGGACAATGAACGTCTATGTCTCTCAACCTCAGTATCCTGAT
ATGTTAGTATGGACAAGGTCTGGAAACCGAGGAAATCAGTGGTTGTCAGC
TTCATCTCCTATTTCCTCAAATGTATTTCAGATTCGTTTTGAGGGCGTTA
GAGGATGGAGTAGCTCCAGTGACATGGCTATCGATGACGTTGTTGTAACA
TCAGGACCCTGCCTGGCTTGTGCTCCAAATCAGTTTACATGCTTCGATGG
AAGTTGTGTTAGCTCAAACCTGACGTGTGATGGCAATTCTGACTGCTTTG
ATGGAAGTGACGAGTCTTTTTGTGGCTATACAAGTGGATGTGCAAACCCA
TCCGTGCTTACGGGATCCTCTGGCAATTTTACGTCTCCTGGTTACCCTGG
CAACTACCCTAACAACGCCCGCTGTTCTTGGCTGATAACCGTCAATTCTG
ACAAGATTGTCGACATCCGATTCACAGCGTTCAACTTGGGGAGCTCCAGC
GGTTGTCCTTATGGTTCCCTCGCTGTGCATGATGGGCCCAACGGTACTTC
TCCTGTGCTTGCCACCCTTTGCGGCTCATCAGCTGGATCAGTCTCCACCA
CTGGGAACAGCGCCTTTCTAGTCTTCAGGAGTGATGGTTCAGTCACGACG
TCTGGATTTTTCGCCGCCTTCACTGCTGAGGATCCCCCGCACACTTGCTC
TCCCGATGAGTTTACATGTTGGAATGGAGACTGTGTTAACATGACCCTTA
CCTGCGACGGCACCAGGGACTGCACTGATGGAAGCGATGAAATCTATTGT
GTGAACGTTGGTTCGAAGTGTGGAGTTCCAGCTATCCAGCCAACCTTTCC
CATCGCCCGTATCGTCGGCGGTAACGGTTCCCGTCCGGGAAGCTGGCCTT
GGCAGGTCTACTTGTTACGTTACGGCTCCTTCCACTGCGGGGGAAGTCTC
ATCCACCCCCTCTGGGTCCTAACCGCTGCTCACTGTGTGGTAAATGATCT
ATCGTCCAGCAGTTACAACGTTATCCTTGGCAAGTACAACAAATCCGGAT
CAATTACCGACCCAACAGAACAACGACTACCAGTCTCCCAGATTATCAGT
CACAACGGATACAGCACTTACCCGACAAATAAGGACCTGGCTTTACTTAA
GCTGGCCCGACCGGTGACACTGAACCAGCATGTGTGGCCCGTCTGCCTTG
TCTCGGGCCCTGGAGCTGACCCTCCTGCGGGAACCAACTGCGTCATCACA
GGGTGGGGAACAACCCAAGGCAAGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000116 | genome | Sc0000116:523991..528207 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95771_evm0 |
| Biotype | protein_coding |
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