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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95798_evm0 >transcript:BL95798_evm0-protein ID=transcript:BL95798_evm0-protein|Name=transcript:BL95798_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=555bp
MKRVVWKYNLYKYNPDGTMLWAAAGMFRRLGGCGRVVVQRRGKGRYSAPA
VRTPSLQQLARAAARFNLELDQAELQEFQNVMKGTLASYQRVDQLVEPLP
PVKWPRTPGWRPEPKDNPHNAWYWRTEITGAPSGKLQGKTVAIKDNVAVA
GVPLMDGSRVLEGYIPEFDATIVTRILDAGGVIKGKSVCEDLCLSGNSFT
SATGPVLNAHDNTRSSAGSSTGSATLLALKEVDLAIGGDQGGSIRLPAAW
SGVVGHKPTHGLVPYTGCVPMETTIDHIGPMARTVADTALMLEVLAGYDG
GLDPRQPPNLTVPEYTSQLTGDLSGTRVGLLKEGFGQELSEADVDDLVRE
AAHKLTSAGATVEEVSVPLHYPDGTHIWNTIGLQGIMQIMMKADGVGVGW
KGFYPTSLMDAFTRGYKSRANDMSATVKLLALLGEYLNENYGNRYYGKGQ
NLGLTLTKAYNEALDKFDVLIMPTIPYKPLKLPDEDVSISEMCRMALTQI
HNTCPFNVTGHPGLSINAGFSEGLPVGMMIMGRHFDDATVLKVAHAFENI
RDSNL Run BLAST on NCBI mRNA from alignment at Sc0000129:714508..720301- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95798_evm0 ID=transcript:BL95798_evm0|Name=transcript:BL95798_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=5794bp|location=Sequence derived from alignment at Sc0000129:714508..720301- (Branchiostoma lanceolatum)
ATGAAACGGGTAGTGTGGAAGGTTTGTCTGTAAGTCGCACGGGGAAAACA
AATTGGTCCCTGTTACTTAAAGTGTTGCCCTCTTGCGAGGATTAATTGCA
CTGCAGTCTGTACACCCGGAACTACAGCGTTACCGCAATAACACAAAACG
TCATGAAAAATGCCAGCTCATGAAACGAGATATCTACTTAGATTGGAAGT
CACGGCTCCACTCTTAAGTTGAATATGTGCCATATATATGTTGAATATGC
GCCATTTAGATAATGCTATGGGTTTTCGTAAGAACCCTTATCATCCGTAC
AAATTACTACAATGTTTTTTTTATTTTATCCATACGTTTTGCCAACAAAC
AAACATGATGCAGAGGTTCAGACCTGACCTCAAGTTCAGAGTTCAAACAG
AGTTCAGACTGGTAGATAGGGCTACGATATTTCCTACCACAGTATAACCT
GTACAAGTATAACCCCGACGGAACTATGCTGTGGGCAGCTGCAGGGATGT
TCAGACGACTGGGTGGTTGTGGAAGGGTGGTGGTGCAAAGGAGAGGGAAA
GGTGAGGACGGTGGTGGAGGGGAAAAGGGGGCGGTGTTGGGGAGGACGTG
GCACAGCGACAAAAATATTTACATTTAGTGTACCAAAATACTACATAACG
TTAAGAGCATCGAGCCACGTCATGCATGTTGGAATGGCGTTAATTATAAG
CCCCGGTCACACATAACCAACCATAGCCTCACGATCACCCCAACCTTCCC
CAGACCACTTTCGTGCTGACGGCTGTTACAGACCGCTTCAGTGTTGACAT
ATCAAACCGTTTACCCGAAGGGTTTACACTGCGACGTTTCAGGATAATCA
TTGCCTCTAGTTACATAATGCCACCACATATGTGTGGAGTGTGTTTGTAC
TTTTGTTCTGTTTGTCAAGCCGCCAGAATAAACATACGTAGGTGTCCCAG
GTCTTGAAGCGTTCAGAACGTCTGGAATGGCTGCATGTAACGTTACGCCA
GAGCCGCCTACGACTACGCCGGAACTACAGTTCTGCTGAAACTTGTCATG
GAGAACATTTCTGACATCTTATAGTTGTTTCATAGCACTAAAGTTGTATG
TATTTGACATGTAACGTTATGACAAGAGCCAAACACAAGGAATTAAAGCA
ATGCAGCACATCTGGCTGTAAACGTGAATAACTGCATTAAGTATGGTACT
TCAACTCCGGTAAAAATGACAAATGTGGTAGGCTATATGTTCTTATGCAG
CTCTTTAGTCTCTAGCTGACCTTGGTGCTTAGTATAGTGTGTTATCATAG
ATGAAGGGTTGTTAGATAGCAACAGAGCAATGGAACAAGAGAGAATTGAT
ACATGGCCGGGTAAATGTCCTAGGGAGACAATTTTGTCAGTGACATTCAT
GTAAGACGAGCGCTTGATGCTGCTCCGACCACAACCTTCCTGAATTACTA
GATGTTATTCGCCTGAACATGTGTATTGCATAGTTTACTCCGTTATAGTT
TTCCAACTAAGATTAGTACACACACGGTGATCCTGAACGGTTCGTTGTTA
TCCTACAGGGCGATACTCTGCCCCGGCTGTCCGCACACCGTCCCTCCAGC
AGCTGGCCCGGGCAGCAGCCAGGTTCAACCTCGAGCTGGACCAAGCAGAA
CTGCAGGAATTTCAAAGTACGTTTGGAACTAAAACCGCAAACATACCAGC
AAACACACATGCTCATCTTAGTGCGTCGTACAGTTGTGAAGTAGCCTGGG
TGACATCCTATTTCTACCGGGTCTCCTACATTCGCTACCCTAAAAAGGAG
CCCCGGTAGAAATTAGGGTAGCGAACGTAGGAGCCCCGGTAGAAATAGGA
AGGCACCCAGGCTAGTTGTGAAGTGCATGATTCTAAAATTCGACGGGATG
AAAGAAAGGATAAACTCTGCAATTTTTCTAAATTTTCAAGCAACACTTGA
TAATAATATCAATAATAGCAAACCCTTCAAAATCAAAAGTAGCCAACAAC
ATTGATATTTTCTTGTGCTGTAGATGTTATGAAGGGTACATTGGCGTCCT
ACCAGCGGGTGGACCAGCTAGTGGAACCGCTGCCTCCCGTCAAGTGGCCG
CGGACGCCGGGCTGGCGGCCGGAACCTAAGGATAACCCGCATAACGCATG
GTGAGCATGCCGTCGTAGTAGTTCATACATTGAAGAAAACTTTGATAAAA
AGTTATCATGATTCAAATGCAACATCATACAAACACATGACACCCCAGAT
ACCAATATTGCATGCTGACACCACTAAATTCACCAATTGTTCAAGCCAGT
TCCATCCGTGCACTGCCCATTGCACGGTCATAGTTTTTACCGGTGTAATA
TACAAAATCCACCAAATTCTATTAAGTTGGTCTTTTCAATTCATGCTTCA
GGTACTGGCGAACAGAGATCACGGGTGCTCCTTCGGGGAAGCTGCAAGGG
AAGACAGTAGCCATCAAAGATAACGTGGCCGTGGCAGGTGTCCCTTTGAT
GGACGGCAGTAGGGTCCTGGAGGGGTACATCCCTGAGTTTGATGCCACCA
TTGTAACCAGGATTCTTGATGCCGGTAAGAATTGGCCATTCAGAATTCAG
AACATGTTGATCTTTATCCCACGAATAAAAGATAGTTGACATTAGCGTCT
ACTAGGCGTTCTATAATTTAAATCTATAAAACGATATATTTTGCATTGAT
TTCATGTCCGTGTCTCTTCAGGTGGAGTCATCAAGGGGAAGTCTGTATGT
GAGGATCTGTGCTTGTCAGGTAATAGTTTCACCTCAGCCACTGGTCCCGT
TCTGAACGCGCACGACAACACACGGTCGTCTGCGGGATCCAGCACGGGAA
GCGCCACTTTGGTACGATATACTTTCCGAAATGTCGACAATCTCCGTACG
TAGCTCCGTTCAAGCTTCTGTTGAAAAGATCATGCACGGTGACCATAAGC
AAGACACCCAAAACGCCCTATCTTATTGATATCATTATCCTCAAGGCCGA
ATATCATAACACTATATCAAAAACGTATGCTAGCCCTTATTGTATTGTAT
TAGTAATTAGGATGTTAAGTTTTATTCTATACTTCTACTTTGTATTATGT
TTACGAATTCTTGCTATACTTTGTACCATGTACAATTGTCGTGCAATAAA
GTCTTCTATCTACACGTATATGTGTTTTTCTCTAAAAGCTGTACATGAAG
GGTTCCCTTTACACGTCGATGGTGTAGTCTTCTTTGTATATATACTAACA
CGGGTGTGTTTGTACCGACCAGCTCGCACTGAAAGAAGTAGACCTCGCGA
TAGGCGGAGACCAGGGCGGGTCCATCCGCCTGCCTGCCGCCTGGTCCGGG
GTGGTGGGACACAAGCCGACCCACGGTCTGGTGCCGTACACGGGGTGTGT
TCCCATGGAAACCACTATTGACCACATCGGACCGATGGCCCGGACTGTGG
CAGACACCGCGCTCATGCTGGAGGTGAGGCTGATGATACTAGTAACCTAT
GGGTCCGTCGAGATCGAAAGCCGACCAATTTCTCTAGGTTATGGTTTGAG
AAGAGAGACGAACGTTAACTTACAAACCATTGTTTGAGGGATAATTAGAA
CATATAACAATGTTTATGTATTATGTATAAGGTTTAGTACAATTATGTAC
AAGAATTATGTATAAGGTATCAAAAGGTATGAAAGAATGATTTTTTGACA
ATTGATTTGCAGGTCCTTGCTGGGTATGACGGTGGCCTAGACCCGCGACA
GCCACCAAATCTCACTGTACCGGAGTACACTAGCCAGGTCTCAGACAACG
TCACTATCTTGCTAACATTAACCTTTGTTATAACTTTAGTAGCATCAGGG
CTGTCATAAATAAAAGTGTAAGGGCCAAAGTATGTGTAAATAACGAACAT
CCTCCACAAGAGGAATCGAATCATTGCAGATTCACAATCAAGAAAAATTT
AAACAGCAAATTTCTTCCTGTCCTGTTTTCTTGTGTACCCGCGTGGTCCG
TTAAAACAGTCTCGGGCCCGTATGCATTAGTAAATTGTGCACTTGATCGG
ATTGTTATCCCTTTGGAACTACTGAACAGTTATCATCATTGTTATAGTTA
ACCGGAGACCTGAGCGGCACGAGGGTGGGGCTGCTGAAGGAAGGGTTCGG
CCAGGAGCTGTCAGAAGCTGACGTGGACGACTTGGTGCGTGAGGCGGCGC
ACAAGCTGACGTCAGCGGGCGCTACAGTGGAGGAAGTGTCCGTCCCACTC
CACTATCCCGATGGTATGTGTGTTGTTTTTATTCCATTGAAGCTTCTAAG
CTTTCAGCGAAAACTGCTCTACTTACCTGTGTGATTGAATGCAATCTTGT
TATCGGTACAAAGTTCGACTTGCAACAAAAAAGTACTGCCCAAAAATACT
AGGATATTTGCGACCATGTTTTCAGTTCACTATAACTGTTCCCACAAGCT
GAGAAAACTTAGCTCAATCCCCGTATGTATTTTAGTTAGTATTCTATTGG
TTAAGATTAACCTTACTAGGTCAACTATTTGATTTCTTTTCCAGGCACAC
ACATCTGGAATACAATTGGACTTCAAGGAATTATGCAGATCATGATGAAG
GCAGATGGTGGGTCAAATCAAGAACACCTTTCTGAGTATTTTTCAGCTTT
TGAAGGAATGGCAGATTTACGAAATATCTGCGTTGTTATTGATGGCAAGG
CAACTTTCTCATGATTTTCAGGTGTTGGAGTCGGATGGAAAGGTTTCTAC
CCGACGAGTTTGATGGATGCTTTCACGAGAGGATACAAATCTCGCGCGAA
TGACATGTCAGCGACAGTGAAGCTTCTGGCTTTGCTCGGTGAATACCTTA
ACGAGAACTATGGAAACAGGTAATTTCGTAGTTTCTGGAAAAATAATCTT
ATCGCCGACCATCATTGATGGCTCCTCATTCCAGTATTTGTGATGGAAAT
AAAACGTAACGCAATATACGGTTAAGTACGTACAGGAAACCCTTTTTATA
ACTATTGATACCTTTTAACATCCGACCATACCATAACACATCAGAATTAA
GAAAATTGCTCACACTACTAGAAGTTTGGTTTTGCTGTGTTGTGCTGTGT
TGTGTTGTGTTGAAGAACGTCATTAAAAGATAACGAGCCTGTTCTATCTG
CAGATACTATGGCAAGGGGCAGAACTTGGGTCTAACGCTGACGAAAGCCT
ACAACGAGGCCCTGGATAAGTTTGATGTCCTCATCATGCCTACTATTCCA
TACAAACCGCTGAAGCTTCCGGATGAGGATGTGTCCATCAGTGGTAAGTT
TCCTCTATCCGTGCGTACTTCATGGCAGCAAAATTTGGCTTATCCTATAT
CACCAATTCTGGCGCATCTTTCTAAGATCTTAACGTAATTGGAGATTTGT
AGCAGACTTGAAGCTATTGCACGATTGCACACAGCGCCATAGATAGGTGA
AAAAAAGTTCTCCTGGCTGCCAAACATATTGATTCGAAGTTTCATCAAAC
CATGGTCTGTGGATGCAAATGCCAAACAGTTTCAATTCTTAAGAAGTTGC
AGATGCAGCATGTAACGTTAACCTTTTATTACCTGGTCCTGTTACAGAGA
TGTGTCGCATGGCACTGACTCAGATCCACAACACCTGTCCGTTCAACGTC
ACCGGACATCCGGGTCTCAGCATCAATGCCGGATTCTCAGAGGGACTTCC
GGTCGGCATGATGATCATGGGCCGCCATTTTGATGACGCCACTGTGCTGA
AAGTGGCACATGCGTTCGAAAATATTCGAGATTCGAATTTGTAA Coding sequence (CDS) from alignment at Sc0000129:714508..720301- >transcript:BL95798_evm0 ID=transcript:BL95798_evm0|Name=transcript:BL95798_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1668bp|location=Sequence derived from alignment at Sc0000129:714508..720301- (Branchiostoma lanceolatum)
ATGAAACGGGTAGTGTGGAAGTATAACCTGTACAAGTATAACCCCGACGG
AACTATGCTGTGGGCAGCTGCAGGGATGTTCAGACGACTGGGTGGTTGTG
GAAGGGTGGTGGTGCAAAGGAGAGGGAAAGGGCGATACTCTGCCCCGGCT
GTCCGCACACCGTCCCTCCAGCAGCTGGCCCGGGCAGCAGCCAGGTTCAA
CCTCGAGCTGGACCAAGCAGAACTGCAGGAATTTCAAAATGTTATGAAGG
GTACATTGGCGTCCTACCAGCGGGTGGACCAGCTAGTGGAACCGCTGCCT
CCCGTCAAGTGGCCGCGGACGCCGGGCTGGCGGCCGGAACCTAAGGATAA
CCCGCATAACGCATGGTACTGGCGAACAGAGATCACGGGTGCTCCTTCGG
GGAAGCTGCAAGGGAAGACAGTAGCCATCAAAGATAACGTGGCCGTGGCA
GGTGTCCCTTTGATGGACGGCAGTAGGGTCCTGGAGGGGTACATCCCTGA
GTTTGATGCCACCATTGTAACCAGGATTCTTGATGCCGGTGGAGTCATCA
AGGGGAAGTCTGTATGTGAGGATCTGTGCTTGTCAGGTAATAGTTTCACC
TCAGCCACTGGTCCCGTTCTGAACGCGCACGACAACACACGGTCGTCTGC
GGGATCCAGCACGGGAAGCGCCACTTTGCTCGCACTGAAAGAAGTAGACC
TCGCGATAGGCGGAGACCAGGGCGGGTCCATCCGCCTGCCTGCCGCCTGG
TCCGGGGTGGTGGGACACAAGCCGACCCACGGTCTGGTGCCGTACACGGG
GTGTGTTCCCATGGAAACCACTATTGACCACATCGGACCGATGGCCCGGA
CTGTGGCAGACACCGCGCTCATGCTGGAGGTCCTTGCTGGGTATGACGGT
GGCCTAGACCCGCGACAGCCACCAAATCTCACTGTACCGGAGTACACTAG
CCAGTTAACCGGAGACCTGAGCGGCACGAGGGTGGGGCTGCTGAAGGAAG
GGTTCGGCCAGGAGCTGTCAGAAGCTGACGTGGACGACTTGGTGCGTGAG
GCGGCGCACAAGCTGACGTCAGCGGGCGCTACAGTGGAGGAAGTGTCCGT
CCCACTCCACTATCCCGATGGCACACACATCTGGAATACAATTGGACTTC
AAGGAATTATGCAGATCATGATGAAGGCAGATGGTGTTGGAGTCGGATGG
AAAGGTTTCTACCCGACGAGTTTGATGGATGCTTTCACGAGAGGATACAA
ATCTCGCGCGAATGACATGTCAGCGACAGTGAAGCTTCTGGCTTTGCTCG
GTGAATACCTTAACGAGAACTATGGAAACAGATACTATGGCAAGGGGCAG
AACTTGGGTCTAACGCTGACGAAAGCCTACAACGAGGCCCTGGATAAGTT
TGATGTCCTCATCATGCCTACTATTCCATACAAACCGCTGAAGCTTCCGG
ATGAGGATGTGTCCATCAGTGAGATGTGTCGCATGGCACTGACTCAGATC
CACAACACCTGTCCGTTCAACGTCACCGGACATCCGGGTCTCAGCATCAA
TGCCGGATTCTCAGAGGGACTTCCGGTCGGCATGATGATCATGGGCCGCC
ATTTTGATGACGCCACTGTGCTGAAAGTGGCACATGCGTTCGAAAATATT
CGAGATTCGAATTTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000129 | genome | Sc0000129:714508..720301 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95798_evm0 |
| Biotype | protein_coding |
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