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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95803_evm0 >transcript:BL95803_evm0-protein ID=transcript:BL95803_evm0-protein|Name=transcript:BL95803_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=486bp
MRRDPEYRRSDNVVPERHHGYRDRFNAEPERHAREEVPLRSRDPEYQRRS
LQQLNAMSTPHPSSLDLFLPLVLEDIHSGRDYCRYLELYGINLSIRDRIA
LGLPIPAPVGRTRRDHAYRGGVNVVPESRSNLVESSVVPDRFEDLSLTEQ
LKMYHSKKLKLEDEQTKHAKELVKIYIGGIVDNVKEQIDAGRPQKANRCR
IEFTGSMYEGTKFGQPDEFDIMVVIDGSEDIESEEMTPGYARLRVGQQPF
VSHRFSKCLDQYQNINPTKMLDWFYGLVQKGVNKVSTSAWDPVSLTVSRH
GPAVMVNIEESNGLSIDVDLVLCIQLSQERYYVAKPYKPYADEPPHWSLA
CDPAVLWRQSFSVTETRMIARIDGANECRRDCLRILKSIFRREPGMDKFT
SFHLKTVLLGMCQDEEQWPSSRMGDRFLDLLRRIESCLRDEHLSHFYLPE
LNLLDGIRRETIENMRGRVRHLIDSESERNRILYVH Run BLAST on NCBI mRNA from alignment at Sc0000132:817434..824856- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95803_evm0 ID=transcript:BL95803_evm0|Name=transcript:BL95803_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=7423bp|location=Sequence derived from alignment at Sc0000132:817434..824856- (Branchiostoma lanceolatum)
ATGAGGAGAGACCCCGAATATCGAAGAAGTGACAACGTCGTGCCAGAAAG
GTGCGTAAAAAGACGGTCGTTTGTGCAGTTACACGCCACCCTGATATGCA
TAGATATTTATATTACTTAAGAGGGAGAAAACGTTCTGCTTAGATTGTTC
ATAATTGTTCAATAATGAACTTACAATTCATGATTGCAATTACAATCCGT
ACAGGCACCATGGATATCGAGATAGATTTAACGCCGAGCCAGAAAGGCAT
GCAAGGGAGGAAGTCCCCTTACGGTCCCGAGACCCCGAATACCAAAGAAG
GAGTTTGCAGCAGTTGAATGCGATGTCGACCCCTCACCCCTCTTCTTTAG
ATTTGTTCTTGCCCCTAGTACTAGAGGACATCCACTCTGGCAGAGATTAG
TAAGTACATATATATCATAGGATAACAGTCGACAGATAACCAACATAAAA
CTACAGTACACATAGTTTTAGACTCATGTGTTTTAGTAGTCCTTGCTTGA
AATTCCGGATAGCATCGCTTGTATCTCGTGTGGCAGGGTGTTTCATTCTG
AAGTAGTTCTGTATCTGAAAACTTTTTTCGTACTGTTCGTTTTTGGTTCA
AAGGTGTCCAAGTTTCCACGTTTACATTTCTTACCGTTTCAAAACGTACA
ATCAGTCACACGTCTCCCTTATATGAATCAATCCTCGTCCCGTACAGCTG
CAGGTACCTCGAATTGTACGGAATCAATCTGTCAATCCGGGACCGCATTG
CCCTTGGCCTCCCTATTCCGGCACCCGTCGGTCGTACTCGTAGGGACCAC
GCCTACCGAGGTGGAGTCAACGTCGTCCCAGAAAGCCGATCGAACCTTGT
CGAAAGCTCCGTGGTCCCTGACAGGTTTGAAGACTTGTCACTCACAGAGC
AGTTGAAGATGTACCACAGCAAGAAACTTAAACTCGAAGACGAACAGACA
AAACACGCCAAAGAGCTGGTTAAAATCTACATTGGAGGTATAGTGGATAA
TGTCAAGGAACAAATTGATGCGGGCAGGCCACAAAAAGCCAACCGATGCC
GGATTGAGTTCACAGGCAGCATGTACGAGGGCACGAAGTTTGGTCAGCCC
GACGAGTTTGACATCATGGTTGTGATTGACGGATCAGAGGATATCGAGAG
CGAGGAGATGACACCCGGTTATGCAAGGCTTCGAGTCGGCCAACAACCTT
TCGTCAGTCACCGGTTCTCCAAGTGTCTTGACCAATACCAAAACATCAAC
CCGACAAAGATGCTCGACTGGTTCTATGGACTTGTGCAGAAAGGCGTTAA
CAAGGTTAGCGCACCTCTCCTTTGAACAGTTTATTCTGTGTGTTGATGGA
GTGGATTAACTTCACTCCTCTTCTAATTCATTTCAGTCATTTTATTTGCC
GTCCTAGCAAGGGTCACATTTCCAAACGCAAATCCGGCCGGGCAGTTGGC
CGGAACGACAAGTATGCTATAAGGAAAAACAAAGCACACAAAATGCAAAA
AAAATTGTCATGCTCATAACTTCTGTATATTTCTTAATAGACTTTTTTTT
GTTCTCGCGAAATGCCCGGGTTTGAAAATGTGACCCTGGCAAAAGACATC
AACCACGTTGGTACGTTTCAAAGTTTCGAATAATTGATAAGATTGACAGG
TTCATTACAAGAACAAGGTGGCATACTTGTCTTTATGCGATGTAGGTAGA
AAACGTTCCATCATTAGAATACCTACATGTGTATGTTAAGGTACAAATTA
CCTCACATGGAATCAAAATGTACAGGTATCAACCTCGGCCTGGGATCCTG
TTTCGCTGACGGTCTCTCGCCACGGACCAGCCGTAATGGTGAGCAAGCCT
ACCTTTTTTTGTCAGATTAATAGCTGCTTGTACNGGTCTTGTGGAGTGTT
TTGGAGCGGGAAAATGCCGGATATTAGCGGTGCCGAACAGTGTACATCGT
CGCGCGGGTGACGCTCCGTCAAAACAAATCCGCCTGTGNNNNNNNNNNNN
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NNNNNNNNNNNTACCGCATAAAAAGAATTATTGAGCTGTCTGTGCTGAAT
TTAAAATCATTGGGTGATCTTGTTGCCACTTCTAAAACCGCTGGACCGGC
GAGCCTTCGCAGTTATTATTTTACATATGTCACCGTAGTTCGCATAAAAA
TTCACTCAACATCAAACAACATCTTGATGAAATCATCTGGCAGAAAACGG
GCAAAGAGTGTAACATCACACAGCTTGAAGCGCAGAACAGTTAGAGCAGT
GTAGCTTTTGCAACTTCGCAACACTTTTCTTGCTTTCTGTGAATCAACCA
TGCGGCAGATTACCACATAAAAAGGAGACTATTTTTGCCTCTTGTCAAAA
TTTCACTTCCCATCTCTGAAAGGTGAATATAGAGGAAAGCAACGGCCTGT
CCATAGACGTGGACCTGGTCCTGTGTATTCAGCTGAGTCAGGAGAGGTAC
TACGTCGCCAAACCGTACAAGCCGTACGCAGACGAACCTCCGCACTGGTC
CCTGGCGTGTGATCCTGCCGTGCTGTGGAGACAGTCTTTCTCCGTCACCG
AGACAAGGATGATAGCAAGGTCAGAAGTGACAAAATGTCTCTCGACTTTA
GTAGAGACTTCTTTGTGGAGTTCTGTGCTTAAATCAACATAATAGCCAAC
GCAGACTGAGCTTTTTATCAATCAATCAATCAATCGATCAATCAATCGAT
CAGTCAATCAATCACTTCTTAAATCAATCAATCAATAAATCAATCGATTA
ATCAATCAAATCAACTCCTACTTGTTCAGGATTGACGGGGCCAACGAGTG
CCGCCGGGATTGCCTCCGTATCCTGAAGAGCATCTTCCGGAGGGAACCAG
GTATGGACAAGTTCACGTCCTTTCACCTGAAGACAGTCCTACTGGGCATG
TGTCAAGATGAGGAGCAATGGCCAAGCAGCAGAATGGGCGATCGTTTCTT
AGATCTGCTGAGGAGGTTAGTCATTCCTCGATCGTACTAGCCTAGAGTTG
ATGTACATGCAAAACTAAACTGCGAAACTATGTGTCAAATGTTGGTCGTT
TGCGACGTCGAAGCAAAACAAGTTTAAGTTTGACACTCACTGGCAATAAT
TCAAAATCTTAGTTTTAAAACCTTCACACACACAGATATTCTACGGCAAG
TGTGTCAAAATTTGTTGCCATGCCCAGTTGGCGGGGGGGGGGGGCGATCC
AAGTGCTTTTATACTCACTAAGCAATAGTCAACCAACCATCTGGAGCCAC
GGTGTAATAACGATATTCCGGCTGACTCCAACCTGTGTGACATCTCAGTG
TTTATTACCGCAGGATCGAGTCGTGTCTGCGAGACGAACATCTATCTCAC
TTCTATCTGCCTGAACTGAACCTGTTGGACGGAATTCGTCGCGAGACCAT
CGAGAACATGCGCGGACGCGTCAGGCACCTGATCGACAGTGAATCTGAGA
GAAACAGAATACTTTATGTTCACTAATAGAATGTGAAGGGATTGTGCCAA
TACTGGCAATAGATACCACCTATAGCTATCATTCCAACCCTGTGAATTTT
CAATGAAGGACGTTTAATTTTCGTAATTTTCGAGGAGAATAAAGTGTAGT
GTAGATTTTATCAGATTTTCCACATAATATTAGTCAGTGAGACAGGTCTT
GACTCAGTAGATATACAAAAAGGTTCGTCGTTAATTTTTCTGACTAAACG
CGATCAATAGATACAAATGCCTTTTAAGAAGTTACAAAACCATTAAATTA
CCCAAGCCATTCTAAATAGAAATTCTGTAAAATCTTTATAAAACTTTATG
CCTATCAAGTGTATACAAAATAGAGCTGATCTTAGGACATATTTCAATGA
TTGGATAATCTCTAAGATAGAACATTATTATTGATAGAAGTGATTTTTAA
GGTAAGCATAATGGATACCATGCATATGATATATCTATATTGCTGAGTTC
ACCTGCGGAATGGACAAACGTCACTAAAAGTACCTATTTCATGTACCTAT
TTTATGAACCTATTTGTCATAGCTAGTTTAGTTTTATTTACAATGTTATG
TCGCTTCAGTAATATTACTTTCAAGTTTTGTTTTGAATGATTATGATGAT
GTGATCTTAACTTAATATTGACTGTAAAGATTGTGGTGGCAAATAAATTT
GTGGTAAAAAAGTCACTAAAAGTCTAATTAATAGTTCTCCGATGTCACGG
TGCAAGCTTATAGTCGTGTGGGTTTGATTAAGAGTAACAGACCCCCAGGG
TTTGCTTTGAGGTAAACATTAACATTTTTCAGACAGCGCGGCACTTGACG
TAATAGATTTTCAAAAAATGTGTATCATTGTATCGTCTCCGTTGATAGAG
ATTCAGGAGTGATTCAGAAACAAGAGTTTGTCTTGTAGGGCTTGGTAGAT
GTAATATCTAAGCAAATTTCGGAATGAAAGTTTTGACTGGCTGTCGAGGT
TCAACATGCGCCCGNTAAGCAATAGTCAACCAACCATCTGGAGCCACGGT
GTAATAACGATATTCCGGCTGACTCCAACCTGTGTGACATCTCAGTGTTT
ATTACCGCAGGATCGAGTCGTGTCTGCGAGACGAACATCTATCTCACTTC
TATCTGCCTGAACTGAACCTGTTGGACGGAATTCGTCGCGAGACCATCGA
GAACATGCGCGGACGCGTCAGGCACCTGATCGACAGTGAATCTGAGAGAA
ACAGAATACTTTATGTTCACTAA Coding sequence (CDS) from alignment at Sc0000132:817434..824856- >transcript:BL95803_evm0 ID=transcript:BL95803_evm0|Name=transcript:BL95803_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1461bp|location=Sequence derived from alignment at Sc0000132:817434..824856- (Branchiostoma lanceolatum)
ATGAGGAGAGACCCCGAATATCGAAGAAGTGACAACGTCGTGCCAGAAAG
GCACCATGGATATCGAGATAGATTTAACGCCGAGCCAGAAAGGCATGCAA
GGGAGGAAGTCCCCTTACGGTCCCGAGACCCCGAATACCAAAGAAGGAGT
TTGCAGCAGTTGAATGCGATGTCGACCCCTCACCCCTCTTCTTTAGATTT
GTTCTTGCCCCTAGTACTAGAGGACATCCACTCTGGCAGAGATTACTGCA
GGTACCTCGAATTGTACGGAATCAATCTGTCAATCCGGGACCGCATTGCC
CTTGGCCTCCCTATTCCGGCACCCGTCGGTCGTACTCGTAGGGACCACGC
CTACCGAGGTGGAGTCAACGTCGTCCCAGAAAGCCGATCGAACCTTGTCG
AAAGCTCCGTGGTCCCTGACAGGTTTGAAGACTTGTCACTCACAGAGCAG
TTGAAGATGTACCACAGCAAGAAACTTAAACTCGAAGACGAACAGACAAA
ACACGCCAAAGAGCTGGTTAAAATCTACATTGGAGGTATAGTGGATAATG
TCAAGGAACAAATTGATGCGGGCAGGCCACAAAAAGCCAACCGATGCCGG
ATTGAGTTCACAGGCAGCATGTACGAGGGCACGAAGTTTGGTCAGCCCGA
CGAGTTTGACATCATGGTTGTGATTGACGGATCAGAGGATATCGAGAGCG
AGGAGATGACACCCGGTTATGCAAGGCTTCGAGTCGGCCAACAACCTTTC
GTCAGTCACCGGTTCTCCAAGTGTCTTGACCAATACCAAAACATCAACCC
GACAAAGATGCTCGACTGGTTCTATGGACTTGTGCAGAAAGGCGTTAACA
AGGTATCAACCTCGGCCTGGGATCCTGTTTCGCTGACGGTCTCTCGCCAC
GGACCAGCCGTAATGGTGAATATAGAGGAAAGCAACGGCCTGTCCATAGA
CGTGGACCTGGTCCTGTGTATTCAGCTGAGTCAGGAGAGGTACTACGTCG
CCAAACCGTACAAGCCGTACGCAGACGAACCTCCGCACTGGTCCCTGGCG
TGTGATCCTGCCGTGCTGTGGAGACAGTCTTTCTCCGTCACCGAGACAAG
GATGATAGCAAGGATTGACGGGGCCAACGAGTGCCGCCGGGATTGCCTCC
GTATCCTGAAGAGCATCTTCCGGAGGGAACCAGGTATGGACAAGTTCACG
TCCTTTCACCTGAAGACAGTCCTACTGGGCATGTGTCAAGATGAGGAGCA
ATGGCCAAGCAGCAGAATGGGCGATCGTTTCTTAGATCTGCTGAGGAGGA
TCGAGTCGTGTCTGCGAGACGAACATCTATCTCACTTCTATCTGCCTGAA
CTGAACCTGTTGGACGGAATTCGTCGCGAGACCATCGAGAACATGCGCGG
ACGCGTCAGGCACCTGATCGACAGTGAATCTGAGAGAAACAGAATACTTT
ATGTTCACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000132 | genome | Sc0000132:817434..824856 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95803_evm0 |
| Biotype | protein_coding |
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