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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95811_evm2 >transcript:BL95811_evm2-protein ID=transcript:BL95811_evm2-protein|Name=transcript:BL95811_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=194bp
MKHSTGMGHSGMNHAVMPGINHSGMNHSGMNHSGMNHSGMNHSGINHFGM
NHSGMNHSGGALVGFCIGVFAIAMLYEGLKVWREMLMVRAHDSKNAASLS
MKQLTNGKSTSALGVDFMPGETPPAKTRDQICNSMHALQSLLHIVQVLIS
YGLMLVFMTFNAWLCLSVALGAGAGYFAFGWRRPITVDRNEHCH Run BLAST on NCBI mRNA from alignment at Sc0000135:176859..178795- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95811_evm2 ID=transcript:BL95811_evm2|Name=transcript:BL95811_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=1937bp|location=Sequence derived from alignment at Sc0000135:176859..178795- (Branchiostoma lanceolatum)
ATGAAGCACAGCACAGGGATGGGGCATTCCGGCATGAACCATGCCGTTAT
GCCGGGAATAAACCACTCCGGAATGAATCACTCCGGAATGAACCACTCTG
GCATGAACCACTCCGGAATGAACCACTCCGGCATAAACCACTTCGGAATG
AATCACTCCGGAATGAACCACTCCGGCGGAGGTCATTCAAGTCATGGCAG
CGTGGTAAGATGGATGTCATTGGTGGCTTTTGATCGTTTTTTGTATATTC
TTAACATTCTTGAGATTCACGAACGCTACATTTCAAAAGGAGCAGGTATT
GCATAGCCTTACATATATTTTTAAAACAAATGGATTATTGTATTTTAACA
AATCTGATTCATCGGATTTCACAGTTTGTAACGGATTGTAAGCGTAAATG
CCTCTGAGTTTCTTCTGAGGAAGGAGAGTGCCTTGCATGTTATGTCAGCT
TTTGATTCATTAACGTGATTCTGGTACTGCTCTAGGGACACAACTTGTAC
TTCTACTTCGGTCACAAGGGAATCACCGTGCTGTTCTACGAGTGGAAAAT
AGACTCAGTAGCAGGCGAGTGCATTTGATTGTTACATATGTTCCATTTTG
TTCCATTTCGTTCCATTTAGCACTTTCAGTACTATAATCTTGTTCCAACT
TCATGAAAACAGTGCTGATGACGAACTAGTGATGACTATGGCAAGTTTGT
AAATGCTGGGCAAACAGGTTCTGAGGATAATTGTTCCTTCAGTTCGATTT
GTTTAATGATTTGTTTAATGTTGACTGGACGTTGGAACATCTTTTTCCTT
GGAATAGAGACACTGTTTCTCTTTGATTTTTGTACGATAAACTGCATGAT
GTAAATGATTGCCACCACTCTACATACAGCTCTGGTTGGTTTCTGTATCG
GGGTGTTCGCCATCGCTATGTTGTACGAGGGTCTGAAGGTTTGGCGGGAA
ATGTTGATGGTGCGGGCACACGACAGTAAGAATGCGGCCTCTCTCAGCAT
GAAGCAGCTCACCAACGGGAAGAGCACAAGTGCGCTGGGCGTCGACTTTA
TGCCGGGGGAGACACCGCCAGCAAAGACAAGGTGAACATCGCAATCAAAA
CACAGCCTACCCCTATACCTACATCACCAACGTCTGTCTTTCCTTGAGCT
ACTGTGTTCACATTCATACATTATAGGACAATAACCTCGCGGAACTTTTT
CATCCGAGAAAAACAAGTCATGTTTAGGTACTTATTTATAATAAGGTATT
CAGGTAGACTTTGAAAGGCAAAGTTCCTTTCTAGCTAGCTTTCTGTTACA
AATGGCCTTCAGCCTAACGTAATGATCTTGCCTCACAGCGTCTGCCTGGA
GTTTAACTCGGGTACACGCATTGAAATAATTATAAGCACATTTTAAGAAA
TCAGCAAGGGTGTCTTGAGTTGTACATTTGAATGGCATGCTTTGCATGGC
ACAACTGATACTCGCATAGCTATTACGTGTTATTGCATTATGTATCAAGG
TACCATTCCTATTCTACAGGGATCCGATCTGTAACTGTATGCATTAAGAT
TTTAAAAAACGGTCTTTTGTTGCATCTCCTCAAGTGACTTCTTCTCTCTA
ATTTCGTGTGGCTATGTTCATATCCTTCATGCAATATTGAATAGTATTTT
ACAGGGACCAGATCTATTACGCGTAATGCAGTCTCTCTTGCTTTATCCAA
TGTTAAAAACGTGTTTTTATTGTCATTTTGTACAGGGATCAGATCTGTAA
CAGCATGCACGCGCTGCAGTCTCTCCTGCACATCGTCCAGGTTCTGATCA
GCTACGGGCTGATGTTGGTCTTCATGACGTTTAACGCGTGGCTGTGTCTG
TCCGTGGCGCTCGGGGCAGGGGCTGGGTACTTCGCCTTCGGCTGGCGCAG
GCCCATCACCGTGGACAGGAACGAACACTGTCATTAA Coding sequence (CDS) from alignment at Sc0000135:176859..178795- >transcript:BL95811_evm2 ID=transcript:BL95811_evm2|Name=transcript:BL95811_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=1755bp|location=Sequence derived from alignment at Sc0000135:176859..178795- (Branchiostoma lanceolatum)
ATGAAGCACAGCACAGGGATGGGGCATTCCGGCATGAACCATGCCGTTAT
GCCGGGAATAAACCACTCCGGAATGAATCACTCCGGAATGAACCACTCTG
GCATGAACCACTCCGGAATGAACCACTCCGGCATAAACCACTTCGGAATG
AATCACTCCGGAATGAACCACTCCGGCGGAGCTCTGGTTGGTTTCTGTAT
CGGGGTGTTCGCCATCGCTATGTTGTACGAGGGTCTGAAGGTTTGGCGGG
AAATGTTGATGGTGCGGGCACACGACAGTAAGAATGCGGCCTCTCTCAGC
ATGAAGCAGCTCACCAACGGGAAGAGCACAAGTGCGCTGGGCGTCGACTT
TATGCCGGGGGAGACACCGCCAGCAAAGACAAGGGATCAGATCTGTAACA
GCATGCACGCGCTGCAGTCTCTCCTGCACATCGTCCAGGTTCTGATCAGC
TACGGGCTGATGTTGGTCTTCATGACGTTTAACGCGTGGCTGTGTCTGTC
CGTGGCGCTCGGGGCAGGGGCTGGGTACTTCGCCTTCGGCTGGCGCAGGC
CCATCACCGTGGACAGGAACGAACACTGTCATTAAATGAAGCACAGCACA
GGGATGGGGCATTCCGGCATGAACCATGCCGTTATGCCGGGAATAAACCA
CTCCGGAATGAATCACTCCGGAATGAACCACTCTGGCATGAACCACTCCG
GAATGAACCACTCCGGCATAAACCACTTCGGAATGAATCACTCCGGAATG
AACCACTCCGGCGGAGCTCTGGTTGGTTTCTGTATCGGGGTGTTCGCCAT
CGCTATGTTGTACGAGGGTCTGAAGGTTTGGCGGGAAATGTTGATGGTGC
GGGCACACGACAGTAAGAATGCGGCCTCTCTCAGCATGAAGCAGCTCACC
AACGGGAAGAGCACAAGTGCGCTGGGCGTCGACTTTATGCCGGGGGAGAC
ACCGCCAGCAAAGACAAGGGATCAGATCTGTAACAGCATGCACGCGCTGC
AGTCTCTCCTGCACATCGTCCAGGTTCTGATCAGCTACGGGCTGATGTTG
GTCTTCATGACGTTTAACGCGTGGCTGTGTCTGTCCGTGGCGCTCGGGGC
AGGGGCTGGGTACTTCGCCTTCGGCTGGCGCAGGCCCATCACCGTGGACA
GGAACGAACACTGTCATTAAATGAAGCACAGCACAGGGATGGGGCATTCC
GGCATGAACCATGCCGTTATGCCGGGAATAAACCACTCCGGAATGAATCA
CTCCGGAATGAACCACTCTGGCATGAACCACTCCGGAATGAACCACTCCG
GCATAAACCACTTCGGAATGAATCACTCCGGAATGAACCACTCCGGCGGA
GCTCTGGTTGGTTTCTGTATCGGGGTGTTCGCCATCGCTATGTTGTACGA
GGGTCTGAAGGTTTGGCGGGAAATGTTGATGGTGCGGGCACACGACAGTA
AGAATGCGGCCTCTCTCAGCATGAAGCAGCTCACCAACGGGAAGAGCACA
AGTGCGCTGGGCGTCGACTTTATGCCGGGGGAGACACCGCCAGCAAAGAC
AAGGGATCAGATCTGTAACAGCATGCACGCGCTGCAGTCTCTCCTGCACA
TCGTCCAGGTTCTGATCAGCTACGGGCTGATGTTGGTCTTCATGACGTTT
AACGCGTGGCTGTGTCTGTCCGTGGCGCTCGGGGCAGGGGCTGGGTACTT
CGCCTTCGGCTGGCGCAGGCCCATCACCGTGGACAGGAACGAACACTGTC
ATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000135 | genome | Sc0000135:176859..178795 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95811_evm2 |
| Biotype | protein_coding |
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