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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95841_evm0 >transcript:BL95841_evm0-protein ID=transcript:BL95841_evm0-protein|Name=transcript:BL95841_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=540bp
MAEKGVVDGLGSSILVGVVKHEPGGRGKIMTVRYTKPLDGGWGWAVVLAV
FVICACTMGVTRSFGVFFIEFTAQFNQPATSTSWVISVAMAITFGGAIFG
GMFGTMFGFRPVAMVGGVLAAVGCILTSFAGSIVHLYLTTGVLTGFGSSL
AFIPSMSMVGKYFDKKRALANGIAFSGVSVGNIVFPPVFTYLIEEYGWRG
SFLIAAGVXSFLIAAGVMLNITAFAALLRPIQLPMPTPGPDTQAPANPNA
PYRNGPSDAEQRGLPRDDSEMGPPTGAGPSDDMKVAIVSNGKSATPAPRS
PGKMILAQWKSLLAYIPFVCLTISVFLLGFGFFIPIVHMAPRARYLGIEQ
YQAAFLISMISIGDVVGRIASGLLPTFRRFRLLHWYILAMLGMGTTSLLS
PLANTYATLATYSVFYGILGGASMSISLTVLAELVGPARLSNAMGLMTLL
MSVAILGGPPVAGALYDATQNYNMSFIVAGCAPVLGGLIAAIMLCLGDEN
VRRVSGRESSIPDPVNGARPGVVKSDDKDVLKPFAIETSV Run BLAST on NCBI mRNA from alignment at Sc0000156:378605..382717- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95841_evm0 ID=transcript:BL95841_evm0|Name=transcript:BL95841_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4113bp|location=Sequence derived from alignment at Sc0000156:378605..382717- (Branchiostoma lanceolatum)
ATGGCTGAAAAGGGCGTTGTTGATGGTCTGGGCTCTAGTATCCTGGTTGG
GGTTGTCAAACATGAACCTGGCGGCAGGGGAAAAGTGAGTTGGCAAACAT
TTCATATGCGTATTTCATATCGACTTATCAGCAGGTGCGATGCTAAGCTC
ATATGCTTGTTTCTTGTTCCGTTCATTTTCAAATCATTTTTTTTTCATCA
AAGGCCTCGCCTTATAAATAGATTTAGAATGGTTCATGCCAAATGGTCAT
TAGAAGATGTAACATAGGAAACATATTATTATTGTAGAATCTAGTCATTC
ATTGTTTAAATGATTTTTGAAAAACGGTTGCATTTATATAATCATATCAA
ATCCACACTTCTCTTCGTTGATGTATGTATCAAAAAGAAAAGAAAAAAAA
CAACTCCCGCCTGCCTCATTAATCAGTTATACGGCTGCGGAGTCACTACA
TATATATAAGTATCAGGAAACGCCGCCTTCTTACCACGAATTGCCACGAC
CATATTTTCCCCAGAGAATGGTACGTGACATGTTCAAGGATCCGTCTGAA
CTCCTGGAACTCTGGACATGTCTACTTTATGTAATATGCGATCAAATGTA
ATATGCCTCCTCCTGCCGCAAGCGTAGGCACTGTGAATTGCTATCCACGT
TCCAAGAAACGCCCCCAACTTTCCAAGAAAAGTCATGACGCTCCTTGAGG
ACGGAGGGACAGATCGTAAGACAATTCGGCGAGGAGACCAAATTTGGCAA
AGTGTCAGCGCGAATCTAGTACATTACGTGCGTGCAGGTGCGTTAATATT
GTGCTTTGCTGCCAACCGTGCTCAGTAGTACCAATGCCCAGAAAAAAAGG
ATTTTATCGCAGAAGGAAATTAAAAGTAAGCGATCTCTGACAAACCTGAA
CCTTTTCAGACTAATAAGATGTTATAATCAAATAGGCAACAAGGCCTATA
AACGTTAAGCTGGTGGTAATTACTATGACCCCTGTAAGATACACCTCGGC
GAGGGAAGTATATTACGTGCGTGCGGGTGCGTTTGTATTTTGCATCAGGG
GTATCAATGCCCCAAACGACACAACATGATGAGAGCGGCGCTAAAAATTC
AATCTGGCGGTAAACGAGAAAAACGCAATTTTGTGCTCACATTCAGCTAC
AATTTATTGCTATCGTCGTCTTTTGACTTCAGAACGCATGTATCTATTTG
ACCCTTTTCCCTTGTTTTCAATGCACACATGTGCAAACCGACGACGCTTG
ATGTTGTTACCATGTTTTGCAGATCATGACGGTGCGTTACACCAAGCCTC
TGGATGGGGGGTGGGGCTGGGCCGTCGTACTGGCGGTTTTCGTCATCTGC
GCATGCACCATGGGAGTGACACGGTCGTTCGGTGTGTTCTTCATCGAGTT
CACCGCGCAGTTCAACCAACCGGCAACTTCCACGTCATGGGTCATCTCTG
TTGCCATGGCAATAACATTTGGAGGAGGTAGGGAGATTCAAAGGCCTCTT
TGAGATACACTTGTAGAACATCAGATACTGGAAATGATCCTCGGTTGGTA
TTCCAAGTCTTCAATTTCATAGATAACGTCACACGTAAATCAGATCGATT
CGGATTCACCTTTGTAATGTTGTTTTTCATGATATTGAGAGCATTCCACA
TCAGACTAATAATTATGAAAAAAAATGATTTTACCACAAAAGGAAAAGAA
AGCTTTCTCTTGCAAAACTGGACATTTTAAGGACAAGAGCTAGAGGATGT
TATTTATAGAATATAAACGTGAAACTGATGTTTATCATAACAATGTCTTC
CAGCGATTTTCGGCGGGATGTTCGGCACGATGTTCGGCTTCAGACCGGTA
GCGATGGTGGGCGGAGTCCTGGCGGCGGTTGGCTGCATTCTGACGTCATT
CGCAGGCAGTATAGTCCACCTGTACCTCACCACGGGGGTTCTCACCGGTG
AGTTATGGATCTGGGTTTGTCCTAATCGCTTCTGCAGGCGTCACGCGGCG
ATGACCCGGTAGATTACGGCAAACGACTTATGGATCAGAACCTACGGCCT
ACGTACATTTCAATCTTACGCTACGCGATGTAGAAAAGATAAAAAGAGGA
GGCCTAGTACCTGAGGTCTATTAAGCTGGTGTGCTACGCCGAAGGGCGAT
TATACCGGCCATACTGATACAGATATTCATCGGGACTACTTCGACGGAGC
TGAGACGGAGTATGGAAATTACATTTTAGAGATAGTGTGGGTGGGTGGTA
ATAAAACGTCTCAGAATTACCTAGCCTGGAGTCCAGCCTTTTCAGCTTTA
GTCCACTACCCAAGCTCCGCCCCTTGCCAAGAAGGAGGAGCGGAGCTTGG
GTAGCGGGCTAAAGATACACGTAAGAAGGCTGGACCCCAGGCTAAGAATA
ACCTACGAAGGATCTAGTATCTGTTATCACCATTTCTCCACATCGTTTAC
GCGTATGCTAGTGATGATACATGAGCCCTATCCTTAACAACACTGATAAT
ACCGTTGTGCCCACTCCAGGTTTCGNAGAATAACCTACGAAGGATCTAGT
ATCTGTTATCACCATTTCTCCACATCGTTTACGCGTATGCTAGGGATGAT
ACATGAGCCCTATCCTTAACAACACTGATAATGCCGTTGTGCCTACTCCA
GGTTTCGGTTCGTCCTTGGCTTTCATCCCAAGCATGAGCATGGTGGGGAA
ATACTTCGACAAGAAGCGGGCCCTCGCCAACGGTATCGCCTTCTCAGGCG
TCAGCGTGGGCAACATCGTGTTTCCCCCCGTCTTCACGTATCTGATAGAG
GAGTACGGGTGGAGAGGGTCCTTCTTGATCGCTGCCGGAGTCNGGTCGTT
CTTGATCGCTGCCGGAGTCATGCTCAACATCACAGCTTTCGCGGCCTTGT
TGAGGCCGATCCAGCTGCCCATGCCGACACCAGGGCCCGACACACAAGCG
CCTGCAAACCCCAATGCACCGTATCGCAACGGGCCTTCAGACGCGGAGCA
AAGAGGCTTGCCCCGGGACGATTCTGAGATGGGGCCGCCCACAGGCGCTG
GTCCTTCTGACGATATGAAGGTTGCAATCGTATCAAATGGGAAGTCAGCA
ACGCCAGCTCCCAGAAGTCCAGGGAAGATGATTCTGGCTCAGTGGAAGTC
ACTCTTGGCCTACATTCCATTCGTGTGTCTGACAATTTCCGTATTCCTCC
TCGGCTTCGGCTTCTTCATTCCCATCGTGCACATGGCCCCGCGCGCAAGG
TATCTCGGGATCGAGCAGTACCAGGCGGCCTTCTTGATCTCGATGATCTC
TATTGGAGACGTGGTTGGCCGGATAGCGTCCGGGCTGCTTCCTACGTTCC
GCAGATTCCGTCTCCTCCATTGGTACATCCTGGCCATGTTGGGGATGGGC
ACTACATCTCTTTTGTCACCGCTGGCAAATACGTACGCAACGTTAGCCAC
TTACAGCGTCTTCTACGGGATCCTGGGAGGAGCAAGCATGTCCATATCAC
TCACAGTCCTAGCGGAATTGGTTGGTCCTGCAAGGCTCTCCAACGCCATG
GGGCTGATGACGCTGCTGATGAGCGTGGCAATTCTGGGTGGACCGCCTGT
CGCCGGTATGAACGTCTTTACCTTATTCCTTCATTACAACCTTTATATAA
CTTGTTATTTTATGAATAGATCATTCTATTTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCATACATCATATAGTACCATATGCCTTCTAGTTTTAT
ATAACCTGTACATCTATAAATAATGTATATATATATATATATAGAGAGAG
AGAGAGAGAGAGAGAGAGAATTACGCAACGATGTATGCCGTGTTTTAATT
AAATTTATGTAATGCCTTGTCCAACAGGAGCACTGTACGACGCTACCCAA
AATTACAACATGTCGTTCATCGTGGCCGGATGCGCCCCCGTGCTAGGAGG
ACTGATAGCCGCCATCATGCTGTGCCTTGGGGACGAGAACGTACGCCGAG
TGTCTGGGAGGGAGAGCTCTATTCCCGACCCCGTCAACGGAGCCCGACCC
GGCGTCGTCAAGTCAGACGACAAAGACGTTCTGAAGCCGTTTGCCATCGA
AACATCAGTGTAA Coding sequence (CDS) from alignment at Sc0000156:378605..382717- >transcript:BL95841_evm0 ID=transcript:BL95841_evm0|Name=transcript:BL95841_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1623bp|location=Sequence derived from alignment at Sc0000156:378605..382717- (Branchiostoma lanceolatum)
ATGGCTGAAAAGGGCGTTGTTGATGGTCTGGGCTCTAGTATCCTGGTTGG
GGTTGTCAAACATGAACCTGGCGGCAGGGGAAAAATCATGACGGTGCGTT
ACACCAAGCCTCTGGATGGGGGGTGGGGCTGGGCCGTCGTACTGGCGGTT
TTCGTCATCTGCGCATGCACCATGGGAGTGACACGGTCGTTCGGTGTGTT
CTTCATCGAGTTCACCGCGCAGTTCAACCAACCGGCAACTTCCACGTCAT
GGGTCATCTCTGTTGCCATGGCAATAACATTTGGAGGAGCGATTTTCGGC
GGGATGTTCGGCACGATGTTCGGCTTCAGACCGGTAGCGATGGTGGGCGG
AGTCCTGGCGGCGGTTGGCTGCATTCTGACGTCATTCGCAGGCAGTATAG
TCCACCTGTACCTCACCACGGGGGTTCTCACCGGTTTCGGTTCGTCCTTG
GCTTTCATCCCAAGCATGAGCATGGTGGGGAAATACTTCGACAAGAAGCG
GGCCCTCGCCAACGGTATCGCCTTCTCAGGCGTCAGCGTGGGCAACATCG
TGTTTCCCCCCGTCTTCACGTATCTGATAGAGGAGTACGGGTGGAGAGGG
TCCTTCTTGATCGCTGCCGGAGTCNGGTCGTTCTTGATCGCTGCCGGAGT
CATGCTCAACATCACAGCTTTCGCGGCCTTGTTGAGGCCGATCCAGCTGC
CCATGCCGACACCAGGGCCCGACACACAAGCGCCTGCAAACCCCAATGCA
CCGTATCGCAACGGGCCTTCAGACGCGGAGCAAAGAGGCTTGCCCCGGGA
CGATTCTGAGATGGGGCCGCCCACAGGCGCTGGTCCTTCTGACGATATGA
AGGTTGCAATCGTATCAAATGGGAAGTCAGCAACGCCAGCTCCCAGAAGT
CCAGGGAAGATGATTCTGGCTCAGTGGAAGTCACTCTTGGCCTACATTCC
ATTCGTGTGTCTGACAATTTCCGTATTCCTCCTCGGCTTCGGCTTCTTCA
TTCCCATCGTGCACATGGCCCCGCGCGCAAGGTATCTCGGGATCGAGCAG
TACCAGGCGGCCTTCTTGATCTCGATGATCTCTATTGGAGACGTGGTTGG
CCGGATAGCGTCCGGGCTGCTTCCTACGTTCCGCAGATTCCGTCTCCTCC
ATTGGTACATCCTGGCCATGTTGGGGATGGGCACTACATCTCTTTTGTCA
CCGCTGGCAAATACGTACGCAACGTTAGCCACTTACAGCGTCTTCTACGG
GATCCTGGGAGGAGCAAGCATGTCCATATCACTCACAGTCCTAGCGGAAT
TGGTTGGTCCTGCAAGGCTCTCCAACGCCATGGGGCTGATGACGCTGCTG
ATGAGCGTGGCAATTCTGGGTGGACCGCCTGTCGCCGGAGCACTGTACGA
CGCTACCCAAAATTACAACATGTCGTTCATCGTGGCCGGATGCGCCCCCG
TGCTAGGAGGACTGATAGCCGCCATCATGCTGTGCCTTGGGGACGAGAAC
GTACGCCGAGTGTCTGGGAGGGAGAGCTCTATTCCCGACCCCGTCAACGG
AGCCCGACCCGGCGTCGTCAAGTCAGACGACAAAGACGTTCTGAAGCCGT
TTGCCATCGAAACATCAGTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000156 | genome | Sc0000156:378605..382717 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95841_evm0 |
| Biotype | protein_coding |
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