|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95847_evm0 >transcript:BL95847_evm0-protein ID=transcript:BL95847_evm0-protein|Name=transcript:BL95847_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=233bp
MDAIPCYQGPFCERCNVERKGPGERGWVNTCRIDFSCEGKEFGRLYQDLQ
DCQRYFECVEGHSEPFHRNCAPGDIVFDEDQQQCDWPLNVPAPCGTKDDS
STEQEQTDDSSEEDGGNQGGDGDENGQQTEAGDGNENEEGEQTETGGDEN
GGNGEEETGASDEDENTDGDDVDSSEESSEESEESSEESSEESEESSEES
SEESEESSEESSEESSEESSEELLESFFGDIFG Run BLAST on NCBI mRNA from alignment at Sc0000159:291533..294117- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95847_evm0 ID=transcript:BL95847_evm0|Name=transcript:BL95847_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2585bp|location=Sequence derived from alignment at Sc0000159:291533..294117- (Branchiostoma lanceolatum)
ATAATTAATGAGCTAACCCTTATTTGGGACAAACGGCAGTTGTAGCTCAT
GAATAGTTAATGAGCTAACCCTTATTTGGGACAAACGGCAGTTGTAGCTC
ATGAATAATTAATGAGCTAGCAGTAACACGTAACCTGATTGGTTGATAGC
TTCCCAGCGTTCTTTGCGCGCTTGCTTCCGATGAGAGGAAGCAAACGGGT
TTTAACCCCTCTGATTGGCTGAAGCTGTTTTGGTGGCGATATCGTAATAA
CCATGGATGCCATCCCGTGTTACCAGGGCCCTTTCTGCGAGCGATGTAAC
GTGGAGCGGAAGGGTCCTGGTGAACGAGGATGGGTAAACACGTGTCGGAT
AGGTCAGCGGCTGGGTCACCGGGAGGTCGCAGTGTGCTGAGCAACTTGTT
CGTTTGTTTCGCAGAACAGCCTTTTTAGCCATAACACACCAGTACTGTAC
AATAGGTTAGGCTCCATAAGACCGGACTGTAAGTTTTGATTCACTAATAC
GGAAAAGGACCCCTAATCTTTTCGATAAGTGTGGTGGGATCTTTAACTTT
CACGAGGTGTGGCTCTCCTCACAAACAGGACCTCCACGGCTTAACGTCCA
ATTCGAGAGGACGCCCCTAACCGAAGCTAGAGGCTCATTTTCACCTGAGT
AGAGTGAAATAGGCGCTAAGCGCATTTCCCAAGGCACAACGTTTGGGATT
GATAGGCATTTAAACCCAAAACTATACGATTCTAAAGTCAACAACACCAA
CCACACGACCACCTTGCCACCAACTTAACCAGAGAAGTACAAGTGCTATG
GAAGCTTACAAGTAATTTGGAGACTGAAATTTTGCGACTGATAATCCAGA
ATTTGCTATCAATGCAAATTGCTGATTTTATCGATAACGACAGCTGATAG
GTACGTCACTCGGACGCGTCATGACGTAGTGTTGTGTGTACTTTTCTCCT
CGTGACGTGTTTGAGTACAAACATCATCAAAAACTTTAAGTCGTAAACAG
CTTTCTTGTAAGATATAAAAGTAGACTCGAAGTCTCAGTCCACAGAATAC
CGATTCGCCAAGGCCCCATCAACAAGACATCGACAGGTTCTTAGATTCCA
GCTGGCCCAACTCTCAAGACTTCGACATGAACCGTCTACTCTTGGTCCTG
CTTGTCGTCCTGCCGGCTGCAGTTATCTCCGTACCCGCTAGGCACCATCG
CAGAGCTAGATCGAACTGTAAGTCAACAGTCTAACTACATGTACCTTTAA
TCGTACATTTAACAGAGCGTCAAAATAATGGCTCAGGCCGTTGCCAGGAT
TGGACTGTTACAATGTTTTCTCACACCTTTGTGCTTTGATGGGGTAAAAT
GACGTGAAAAATGCCAATGTTGAGTTGCAAAAAAATGCCACCATATTTAT
CATTTTCCTGGCTTTATCCAGACTTCCTTGCTTGCACCTTTCATGAGACC
AATCGGTTTATGTCAAGTTTTGAGATTTCAATAACATTGTGCTTTTGTGC
ACGTTCCTTCCAGATTTCTCATGTGAAGGGAAAGAGTTCGGCCGCCTGTA
CCAGGACCTGCAGGACTGTCAGCGGTACTTCGAGTGCGTGGAGGGTCACT
CCGAACCGTTCCACCGCAACTGTGCGCCGGGAGACATCGTCTTCGATGAA
GACCAACAGCAGTGTGACTGGCCGTTGAACGTACCAGCTCCTTGTGGGGT
AAGTAAAACTTATGAGTTTTCCATTCAAACGGACGCGGATTGTTTAGAAA
TAAAGGTGTTGGAAAAATGTTGTATTTTCGGTTACCCGACCGACCCTAGC
AAATCTTGCCAACCCTAGCCTTTTTTGCCTGCTGGTATTACTATAGGAAG
TAAAATTTTCGATCTGGCATCTGAGTGCTTGTACAATGTACACCTGTATA
CAGTACTTAAAATACGATCTTGAAAATAACATTGTACTGGGGCATTTCAG
TTTTAAATTGTTCAACTGTATTTGCTAGATCACTTCGGCCGAAATTTGAA
AAGGGAACGAAAACAATCCATACTTACCGACTCTTTCATGACCATAAGCA
GATATAATTAACACAGCATTATTAATTGTCCTAGGCCTGATGTTCTTTTG
CGTTTTGTCTATTGAATCATATGGTCTGTGGTTTTCCCTTGGCTCAGTTT
TTGTCGTTCTCCTTACAGACTAAAGATGACAGTTCTACAGAGCAAGAACA
GACAGACGACAGCTCTGAGGAAGACGGCGGTAACCAGGGAGGGGATGGGG
ACGAGAACGGACAACAGACCGAGGCGGGAGATGGGAACGAGAACGAAGAG
GGAGAACAGACCGAGACGGGTGGAGATGAAAATGGCGGGAACGGAGAAGA
GGAGACAGGCGCCTCGGACGAAGATGAGAACACTGATGGTGATGACGTAG
ACAGTTCCGAAGAGTCTTCCGAGGAATCCGAAGAATCGTCCGAGGAGTCC
TCCGAGGAATCCGAAGAATCGTCCGAGGAGTCCTCCGAGGAATCCGAAGA
ATCGTCCGAGGAGTCCTCCGAGGAATCTTCAGAAGAATCTTCCGAAGAAT
TATTGGAGAGTTTCTTCGGAGACATCTTTGGGTAA Coding sequence (CDS) from alignment at Sc0000159:291533..294117- >transcript:BL95847_evm0 ID=transcript:BL95847_evm0|Name=transcript:BL95847_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=702bp|location=Sequence derived from alignment at Sc0000159:291533..294117- (Branchiostoma lanceolatum)
ATGGATGCCATCCCGTGTTACCAGGGCCCTTTCTGCGAGCGATGTAACGT
GGAGCGGAAGGGTCCTGGTGAACGAGGATGGGTAAACACGTGTCGGATAG
ATTTCTCATGTGAAGGGAAAGAGTTCGGCCGCCTGTACCAGGACCTGCAG
GACTGTCAGCGGTACTTCGAGTGCGTGGAGGGTCACTCCGAACCGTTCCA
CCGCAACTGTGCGCCGGGAGACATCGTCTTCGATGAAGACCAACAGCAGT
GTGACTGGCCGTTGAACGTACCAGCTCCTTGTGGGACTAAAGATGACAGT
TCTACAGAGCAAGAACAGACAGACGACAGCTCTGAGGAAGACGGCGGTAA
CCAGGGAGGGGATGGGGACGAGAACGGACAACAGACCGAGGCGGGAGATG
GGAACGAGAACGAAGAGGGAGAACAGACCGAGACGGGTGGAGATGAAAAT
GGCGGGAACGGAGAAGAGGAGACAGGCGCCTCGGACGAAGATGAGAACAC
TGATGGTGATGACGTAGACAGTTCCGAAGAGTCTTCCGAGGAATCCGAAG
AATCGTCCGAGGAGTCCTCCGAGGAATCCGAAGAATCGTCCGAGGAGTCC
TCCGAGGAATCCGAAGAATCGTCCGAGGAGTCCTCCGAGGAATCTTCAGA
AGAATCTTCCGAAGAATTATTGGAGAGTTTCTTCGGAGACATCTTTGGGT
AA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000159 | genome | Sc0000159:291533..294117 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95847_evm0 |
| Biotype | protein_coding |
|
