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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95852_evm1 >transcript:BL95852_evm1-protein ID=transcript:BL95852_evm1-protein|Name=transcript:BL95852_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=370bp
MAASMQHVFVGAATGVFKGVNLAQKKATNFQNVASLSREEEICAMCWGNQ
QESQVCIGLKNGLVKTFDAEQGEFTDCANCAGGEGRFTGLAKYQGSLVTC
VESGLLRVWKDEGEKVDMDVGKDVCRMKQNHALPHQVATGGKENELKLWD
IQEPEKPIFKAKNVRNDFLDLRVPVWVTDLQFLSEQKLVTCTGHRQVRVY
DPATPKRRPVLNVELGEYALTALSVTPDCHSVIVGDSQGSMVMVDLRMGK
VQKAFKGFAGAIRSLQCHPTLPMVASCGLDRFLRIHNINTKEMLHKVYLK
SKLNCLLFSSADFTQEETETTKKQKRKLESSNITEEDEDELWGNMSVVQD
GKKTEKTRRKAKSKKLKKPK Run BLAST on NCBI mRNA from alignment at Sc0000165:452924..457532- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95852_evm1 ID=transcript:BL95852_evm1|Name=transcript:BL95852_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=4609bp|location=Sequence derived from alignment at Sc0000165:452924..457532- (Branchiostoma lanceolatum)
ATGGCTGCCTCCATGCAACATGTGTTCGTCGGTGCCGCGACGGGTGTATT
TAAAGGTTTGTATGTCAATCTGAGGCAACAAAGCATAGTGTCACGCACTT
GTAGCACTACTGAGATTGTGTAGGTATTGGGAATTTATCTATATGAAGGT
CGCATGCGGTATAAACGTCAGTTTTTGCCAAGTAGGGAGGGGGGCAAGGG
GAACTTGCCTGCACCGGTCTCTGCAGGTGATATGATTGCATATATAGTGA
GCACACCGTATCTCAGTGACTGAATTACTGCTGTCTAACCCTTTAAACAT
GCTATGAATTAATGACTTACCTTTTGTTTTTTCACTGTCAACAGCACTGG
AAAATTACTGCATACGTGTTTCCTTCAACTGGATATCTAAAACTATATAA
ATTTATGTCCTTGGTTCATTTGGGAACATCATATTTTGATGATAAGGCAA
GGAGATGTAGCTAAGTTGTGCTTCTTTCAGTTAATTGACTTTTCTTTTGT
GTATGCATCTTAGGTGTAAACCTTGCCCAGAAAAAAGCTACAAATTTCCA
GAATGTTGCAAGTCTGTCCAGGGAGGAAGAGATCTGTGCCATGTGCTGGG
GGAATCAACAGGAAAGCCAGGTAGGATGAAACATTGGCAACTAACTGTTA
CAGGGCTTCTCTGGCATGCAGTCTTTTAACTTTTAGCCTGTAGTAGTAAG
GAAACTGCAAGCAAGAGAAGCCCCGCAACAGTTGCCACAGCTGGACGAGA
AACAGGGATTGAGCTTAAGTTATGCATAGGAAGAGAATCGGACAGCACTA
ATAGTTACTAGCAATGGTAGCACTAAACTATTCATGCAAGGCCTAAGTCA
GTGGAGGAATGATGCACAGCATCTTTTGGAACTTATGCTTGTACTGGATA
AGCCAATTATGAAATGTTTGGAAACCTTAGATGAAGGAGTGCATTGTGCT
CCAGGTTATGTTTACCTATTACACTTGGGTAGAGGAGGGTTGATGGTAGT
GCTCACTGCTCACATTGGATGGGATGCAATTCCATGTAGAGTAACTCGGC
AGAAGTTTTGTAGAAAATATTGCTACATGACGTATTTATGTACATGTATG
TCTTATGATGTAAATGAACATTTTTGATTTTCTTCTTTTCCTCACACGCA
GGTTTGTATAGGCTTGAAGAACGGACTTGTCAAAACCTTTGATGCAGAGC
AGGGGGAATTCACAGACTGTGCCAACTGTGCGGGAGGGGAGGGCAGGTTC
ACAGGACTGGCAAAATACCAGGGGTAAGTTTGACAATATTGTAGGTCTTT
GAAAGCCATATCATTGTTTTTTCAATCTATTATAAAGATGTCCATATGTC
CAATAAAAAATGGTCTTGAATTCTCAGAAAGGTTTGAAAGTTTGCAATTC
TCACCACTACTGGTGTTGGGACTTCTGCAAAGATTTGTGTTGTAATAAAG
CATAAACACCAAGAAGTTTAACTTACAGTTGACGCTTTTTGCTTCCAGAT
CTCTTGTTACATGTGTGGAGTCAGGGTTACTCAGAGTGTGGAAGGATGAA
GGAGAAAAGGTAACGTTAAGTAGTTTGTCCTAGCTACATCTTCACATACA
AAATGCGGGGTTTGTTGATACAAAGCACAATCATATTGATTTGTTTGTTC
TAAATGTAGATCTATTATCAGATCAAATGGAATGGAATGGAATGTAAGAT
CTATTTGCAGGGAAAGATCAAACCTATCTTTAGATCAATATTATATCAGT
GTGATAGCCATTAATTTTCTCCGTCTGTTTTCAGAGAAATCTTGAATAGT
TGTACACATTCTCCTATGTACATTTGGAAGTTGTCCTTCCATTTTCTATC
CAACAACCAATGAGGACAGCAGATAAAAAGCCTTGAGGCAGGTGTACAAA
CTGTGTTGTGGTTTGTCCCCAGGTTGATATGGATGTAGGGAAGGACGTGT
GTCGGATGAAACAGAACCACGCCCTGCCTCACCAGGTGGCCACGGGAGGG
AAGGAGAACGAGCTGAAGCTATGGGACATCCAGGAGCCAGAAAAACCCAT
CTTTAAGGCCAAAAATGTATGTATGTCTTAAAGAAACACTCATTTTGACA
CAATTACTGCATGGAATGAGGGGATATGAGCAACTGTGAGACTGAATGCT
GATTTCTTTATGGACTTTGATTAATGTGATACAATAGCACTGCTTTGATC
ACCCTTTGAGGATAGGACTAGGTGAAGGTGAAGGTGATCACCCTTTATTG
TCTTGATTTACGGTAGATAGAACAGCAAACTGTTTTTGGTTTTAAAAAGA
GGCAATTAGCAAATCACAAGTACCAATTTGAACTAGCAGTGTTACATTTG
TTGATGAATATTTTTTGAAAAGTAGGATTTCAAATTTGAAAAGATTTTCA
TATCAACGTTGACTTTCATCTTTCTCCCACAGGTGCGAAATGACTTCCTG
GACTTGAGAGTTCCTGTGTGGGTCACTGACCTGCAATTTTTATCAGAACA
GAAACTTGTCACATGTACAGGTCATAGGCAGGTGAGTGTGGAAATGTTTC
CTTCTATTTATGGCCGACCCGCTGTATGCCAAAAAGCAATTACTCAAACA
ACTGGATATGATTTTGGAAACGGTCAGACGTTTCAAGTAGCATCCACTAC
TTTTCGTCAGTGACTGTGAGCAAGATCAGTTGAACAGCAGGTTTATAACC
ACGAACTATGAATTGATATGCAAATAAGGAGAAGACAAATTTTTTGATAG
TCCAATAGAAAGCGAATTAGACAACTCAAGACAAGGTTGAAGTAAAAGGG
GACAATAGCTCCTATTGTTGTATGCACCGCTGTCTAAAATTCGTATACCG
TACCTGGACATTGGAATCAATGTTCTTACAATTGTATATTTGGGAACGCC
CAATTTTCTCAACTTCTAGTACATTTTGCATTGAACTGTGTGTTTTCTTG
GATGGGTATGACAAGAAAAGAATTCAACTGTATTCCGCATCATCTTCACT
CCCAGCTCTCCATGTTGTATTCTCTATGTACAAGTGATAGCTCTTATTTC
CTGACTCCAGGTACGAGTGTATGACCCGGCCACTCCCAAGCGCAGGCCTG
TACTGAATGTGGAGCTGGGGGAGTACGCCCTCACAGCTTTGTCTGTCACT
CCAGACTGCCAGTAAGTCCAGAATGATTACAGTGGAAAGTTTTCCTTCAC
ACTCTTGAACTTGAGAACATCTTATCAATATGCTACATTGAAAAGATTAA
TTTGTTGCCAATACTAAACTGGTGTTTAATATGGATCATCATCCTTAGTG
TGTGGTACATCATGAGGTATTGTGATGACTTCAACTGTTGTTTTTGCCCT
GCAGTTCAGTTATTGTGGGAGACAGCCAGGGCAGTATGGTCATGGTGGAT
CTGAGAATGGGTAGGTGTACTCATTACACTCACACCATAAGAATTTATAA
TGTGTCTCTAGAAAGGAACTGAAGCACGTCTTCTAATTATAGAGGTTCCT
TTATAGAGGTTCCGTCATAATACTTGTACAATATTGAGAGAACTGTGTAG
CTAACATTTTCAATGATGTGTTTGAGAAGGTTTTACAAGTATTGTTAAAA
TGAAATTCAATCAATGACACTTTATGTATGTTCATCAAGACAAACCAAGG
GTAAGCAATGAATGCTCAAGATATTTGAATATACAAGATTAGTAGCATGA
TAGAATTTCAAATGATCCTGCACGTTATCATCACAGGTAAAGTGCAGAAA
GCATTCAAGGGGTTTGCAGGAGCCATCCGCAGCCTCCAGTGCCACCCCAC
CCTCCCCATGGTAGCCTCCTGTGGGCTGGACCGCTTCCTCAGGATTCACA
ACATCAATACCAAGGAGATGCTACATAAGGTGAGAGAAGTAACACAAACT
CAATGTCATAGGAGCAATCCTTTAGGGTCTCAGAAGCCAAATAAAGGCAA
ATCTTTTTTGTCTGTCTTTTGTTGCCATTTCTATGAACCACATGTATGAA
GCTTTTGCTGTGGTTGTCCAAAACTGCACCTGCAAGTTTGTAAAGCTAAA
AGAAAGTATTGTTTCTTCCCCAGGTTTACCTGAAGTCCAAGTTAAACTGC
CTTCTCTTCAGCAGTGCAGACTTCACACAGGTAGGGCAAACATTGACAAA
TTGGGTACATCAAATAAACTCCACTGTACAGTGCCTTGTAGCAGGGTGAA
AAATGTACCGGTATTACCTATTTGCCATTGCTGTTTAAGCATGCTCAAAT
ACATCTAGACCTGTATTGCATTGCTAATGTACTGAAGGAAGTTCTATTCT
CATCTGCAATGAATATAGAAATGAAAAGGCTCTTAGATCAGGTATTTTGA
AGGGAATCAAGTCAACTTCTGATGTAAATGGGGCACCGTGCGTGTGCAAT
ATGACTTATTCAATGTATGATTATTTTCATGTTAAACACAGGAAGAGACA
GAGACTACAAAGAAACAGAAGAGAAAGTTGGAATCAAGTAACATTACAGA
AGAGGATGAGGACGAACTGTGGGGGAACATGTCAGTGGTTCAGGATGGCA
AGAAAACAGAGAAGACCAGGAGAAAAGCTAAAAGCAAGAAGCTTAAGAAA
CCTAAATAA Coding sequence (CDS) from alignment at Sc0000165:452924..457532- >transcript:BL95852_evm1 ID=transcript:BL95852_evm1|Name=transcript:BL95852_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1113bp|location=Sequence derived from alignment at Sc0000165:452924..457532- (Branchiostoma lanceolatum)
ATGGCTGCCTCCATGCAACATGTGTTCGTCGGTGCCGCGACGGGTGTATT
TAAAGGTGTAAACCTTGCCCAGAAAAAAGCTACAAATTTCCAGAATGTTG
CAAGTCTGTCCAGGGAGGAAGAGATCTGTGCCATGTGCTGGGGGAATCAA
CAGGAAAGCCAGGTTTGTATAGGCTTGAAGAACGGACTTGTCAAAACCTT
TGATGCAGAGCAGGGGGAATTCACAGACTGTGCCAACTGTGCGGGAGGGG
AGGGCAGGTTCACAGGACTGGCAAAATACCAGGGATCTCTTGTTACATGT
GTGGAGTCAGGGTTACTCAGAGTGTGGAAGGATGAAGGAGAAAAGGTTGA
TATGGATGTAGGGAAGGACGTGTGTCGGATGAAACAGAACCACGCCCTGC
CTCACCAGGTGGCCACGGGAGGGAAGGAGAACGAGCTGAAGCTATGGGAC
ATCCAGGAGCCAGAAAAACCCATCTTTAAGGCCAAAAATGTGCGAAATGA
CTTCCTGGACTTGAGAGTTCCTGTGTGGGTCACTGACCTGCAATTTTTAT
CAGAACAGAAACTTGTCACATGTACAGGTCATAGGCAGGTACGAGTGTAT
GACCCGGCCACTCCCAAGCGCAGGCCTGTACTGAATGTGGAGCTGGGGGA
GTACGCCCTCACAGCTTTGTCTGTCACTCCAGACTGCCATTCAGTTATTG
TGGGAGACAGCCAGGGCAGTATGGTCATGGTGGATCTGAGAATGGGTAAA
GTGCAGAAAGCATTCAAGGGGTTTGCAGGAGCCATCCGCAGCCTCCAGTG
CCACCCCACCCTCCCCATGGTAGCCTCCTGTGGGCTGGACCGCTTCCTCA
GGATTCACAACATCAATACCAAGGAGATGCTACATAAGGTTTACCTGAAG
TCCAAGTTAAACTGCCTTCTCTTCAGCAGTGCAGACTTCACACAGGAAGA
GACAGAGACTACAAAGAAACAGAAGAGAAAGTTGGAATCAAGTAACATTA
CAGAAGAGGATGAGGACGAACTGTGGGGGAACATGTCAGTGGTTCAGGAT
GGCAAGAAAACAGAGAAGACCAGGAGAAAAGCTAAAAGCAAGAAGCTTAA
GAAACCTAAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000165 | genome | Sc0000165:452924..457532 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95852_evm1 |
| Biotype | protein_coding |
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