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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95856_evm2 >transcript:BL95856_evm2-protein ID=transcript:BL95856_evm2-protein|Name=transcript:BL95856_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=207bp
MQKCDPHTFTLRNSHPRRPRPCDVVYTPIKHYRTCAVVGNGGILLHSSCG
AEIDAHEFVIRSNLPPVHDYRRDVGSRTDLTIVNVKRLVQITEALQTFNS
TLRKDMLARLGQSPGMIFSYSFAFIGSKARYRMQIVDTAIKNNHLSTITA
FPSRSFLDSKRYQNKRVPYHYYDKLPPSGRHDFDEEYAMLRQMDADGVIK
HVMTQVV Run BLAST on NCBI mRNA from alignment at Sc0000168:405675..407401+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95856_evm2 ID=transcript:BL95856_evm2|Name=transcript:BL95856_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=1727bp|location=Sequence derived from alignment at Sc0000168:405675..407401+ (Branchiostoma lanceolatum)
ATGCAAAAATGTGACCCTCATACGTTCACACTGCGCAACTCGCACCCACG
CCGCCCAAGACCCTGCGATGTTGTGTACACGCCCATCAAGCACTATCGGA
CATGCGCAGTAGTGGGTAACGGCGGTATACTCCTCCATAGCAGCTGTGGT
GCTGAGATAGACGCTCACGAGTTCGTCATCCGCTCCAACCTGCCGCCCGT
ACATGACTACCGGAGGGATGTGGGCAGCAGGACTGACTTGACCATTGTAA
ATGTTAAGCGGCTTGTACAGATCACAGAGGCCCTTCAGACCTTCAACTCG
ACACTTCGGAAAGACATGCTGGCTCGTCTTGGTCAATCGCCGGGGATGAT
CTTCAGTTATTCATTCGCTTTCATCGGGTCAAAGGCAAGATACAGGATGC
AGATAGTCGACACTGCGATCAAAAACAACCACCTGTCAACGATAACGGCC
TTCCCGTCCAGGTCTTTCTTGGACAGCAAACGGTAAGAATCATTTCTCTG
TGTTTTCGTACAAAGAAAGTAACAGGATAGAAAATAAAATACATAAAAGG
GGACAATAACTACTTCAAGGTAAGCACAAATTAAAGATGATAAGCTGACT
AAAAGGTCGTGATGGAAATAGTTGTTGCTTTCCATTTGTAAAACTTAACG
TAGGTTTATCTATACTACACTGAAGAGAAGGCATACACATGCTTATATTT
CACTGCACTCACAGTTAGTTAGGTTACTAGTTTGTTATTTGGTTGCCTAG
TTAGTCATTTAGTTAGTTAGTTAGTTAACGTATTTGCGCTTCGACATGTG
GTCCTGTTCATTTCTCTACTGGTACCTCTCCTGTAGTGAACAGCTTCACG
TCAGCTAACCTTTGTCAATCCTATCAGTTTATACATAGAACTCGTGGGAA
AACACTGGAGTTTTGCCTCGACTGGCCTGAACACCTTCGCCCTGGCCTCN
GATTGATTGATCAATCGATTGATGATCTCCATGTACGGCTTCTACCCCAT
GTCTAGATACCAGAACAAGCGCGTTCCCTACCACTACTACGACAAACTTC
CGCCCAGTGGTCGCCATGACTTTGACGAGGAGTATGCCATGTTGCGGCAA
ATGGATGCAGATGGAGTTATAAAACACGTGGTCGGGAAATGTAATATACA
TTCTGAAAATACAATACGTTCTGGTAAGAATGTGAATGTGACAAAGCCAA
CACGAAGACGTTCATAGCAAAAGATGTAGACCTTCCTCTAATCCTCCTCC
CAGCACATAAAAGTCATATTTCAGGAGGTATGAATTCTTGATCTCATTTC
ATGAGATATTGCCTTTGTCAGTGGCTGAATCAAAGGATAATGCACCTAAA
TATGATTAAGCAGGTTTATGATTGCAAAAATATGGCGAATGTTGTAAGAG
TATTGTAAGACAAAATAAGACATGGTATTGCAGATATTTGTGCAGCATGA
TATCATTGCTAACTTATTAGTCTACTTATAGCTTCAACTGATAAACATTT
TGAAACTTGCCGCCAATATAACTGTTACATAGAGACATCAAAGTAACTAA
CTAGAGTTCAACAACCTCCTACCTTCGCCAAATGATGTTTACCTTTTCGA
GCGGCGTATTATGCATGTTTATCATTGATTATCAAATTAGCTTAAGNTCA
AATTAGATTAAGGTTCTCATTTGCATAGATTATATCAGTTGATCATTTTC
TCTACTTAGATGACACAAGTTGTTTAA Coding sequence (CDS) from alignment at Sc0000168:405675..407401+ >transcript:BL95856_evm2 ID=transcript:BL95856_evm2|Name=transcript:BL95856_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=1872bp|location=Sequence derived from alignment at Sc0000168:405675..407401+ (Branchiostoma lanceolatum)
ATGCAAAAATGTGACCCTCATACGTTCACACTGCGCAACTCGCACCCACG
CCGCCCAAGACCCTGCGATGTTGTGTACACGCCCATCAAGCACTATCGGA
CATGCGCAGTAGTGGGTAACGGCGGTATACTCCTCCATAGCAGCTGTGGT
GCTGAGATAGACGCTCACGAGTTCGTCATCCGCTCCAACCTGCCGCCCGT
ACATGACTACCGGAGGGATGTGGGCAGCAGGACTGACTTGACCATTGTAA
ATGTTAAGCGGCTTGTACAGATCACAGAGGCCCTTCAGACCTTCAACTCG
ACACTTCGGAAAGACATGCTGGCTCGTCTTGGTCAATCGCCGGGGATGAT
CTTCAGTTATTCATTCGCTTTCATCGGGTCAAAGGCAAGATACAGGATGC
AGATAGTCGACACTGCGATCAAAAACAACCACCTGTCAACGATAACGGCC
TTCCCGTCCAGGTCTTTCTTGGACAGCAAACGATACCAGAACAAGCGCGT
TCCCTACCACTACTACGACAAACTTCCGCCCAGTGGTCGCCATGACTTTG
ACGAGGAGTATGCCATGTTGCGGCAAATGGATGCAGATGGAGTTATAAAA
CACGTGATGACACAAGTTGTTTAAATGCAAAAATGTGACCCTCATACGTT
CACACTGCGCAACTCGCACCCACGCCGCCCAAGACCCTGCGATGTTGTGT
ACACGCCCATCAAGCACTATCGGACATGCGCAGTAGTGGGTAACGGCGGT
ATACTCCTCCATAGCAGCTGTGGTGCTGAGATAGACGCTCACGAGTTCGT
CATCCGCTCCAACCTGCCGCCCGTACATGACTACCGGAGGGATGTGGGCA
GCAGGACTGACTTGACCATTGTAAATGTTAAGCGGCTTGTACAGATCACA
GAGGCCCTTCAGACCTTCAACTCGACACTTCGGAAAGACATGCTGGCTCG
TCTTGGTCAATCGCCGGGGATGATCTTCAGTTATTCATTCGCTTTCATCG
GGTCAAAGGCAAGATACAGGATGCAGATAGTCGACACTGCGATCAAAAAC
AACCACCTGTCAACGATAACGGCCTTCCCGTCCAGGTCTTTCTTGGACAG
CAAACGATACCAGAACAAGCGCGTTCCCTACCACTACTACGACAAACTTC
CGCCCAGTGGTCGCCATGACTTTGACGAGGAGTATGCCATGTTGCGGCAA
ATGGATGCAGATGGAGTTATAAAACACGTGATGACACAAGTTGTTTAAAT
GCAAAAATGTGACCCTCATACGTTCACACTGCGCAACTCGCACCCACGCC
GCCCAAGACCCTGCGATGTTGTGTACACGCCCATCAAGCACTATCGGACA
TGCGCAGTAGTGGGTAACGGCGGTATACTCCTCCATAGCAGCTGTGGTGC
TGAGATAGACGCTCACGAGTTCGTCATCCGCTCCAACCTGCCGCCCGTAC
ATGACTACCGGAGGGATGTGGGCAGCAGGACTGACTTGACCATTGTAAAT
GTTAAGCGGCTTGTACAGATCACAGAGGCCCTTCAGACCTTCAACTCGAC
ACTTCGGAAAGACATGCTGGCTCGTCTTGGTCAATCGCCGGGGATGATCT
TCAGTTATTCATTCGCTTTCATCGGGTCAAAGGCAAGATACAGGATGCAG
ATAGTCGACACTGCGATCAAAAACAACCACCTGTCAACGATAACGGCCTT
CCCGTCCAGGTCTTTCTTGGACAGCAAACGATACCAGAACAAGCGCGTTC
CCTACCACTACTACGACAAACTTCCGCCCAGTGGTCGCCATGACTTTGAC
GAGGAGTATGCCATGTTGCGGCAAATGGATGCAGATGGAGTTATAAAACA
CGTGATGACACAAGTTGTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000168 | genome | Sc0000168:405675..407401 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95856_evm2 |
| Biotype | protein_coding |
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