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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95857_evm3 >transcript:BL95857_evm3-protein ID=transcript:BL95857_evm3-protein|Name=transcript:BL95857_evm3|organism=Branchiostoma lanceolatum|type=polypeptide|length=311bp
MSRSAAPSNLRPLETFPHQPMLKRKVHFNMTNIWKVREITRKYFDPKKHI
IYFSDFDIFMEKCDYQTFTLRDSPERPCNVVRTPIKHYRTCAVVGNGGIL
LESRCGAEIDSHDFVIRLNQPPIHDYRRDVGSRTNLTLVNGKRLKEISRT
LQSIYGKTLKTATSHKDLQLFESPGMIFSYPFIFTKKRQAEMRVIDTAIK
NYNKTTITAFPSTSFLDSKRVYEELVGKHWNFTSTGLNSFALASTFCDKI
SMYGFYPMPLYQSRRFPYHYYDKRLPSGSHDFDGEFAMLRQLDVDGVIRH
VLGECKPAADA Run BLAST on NCBI mRNA from alignment at Sc0000168:411099..418160+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95857_evm3 ID=transcript:BL95857_evm3|Name=transcript:BL95857_evm3|organism=Branchiostoma lanceolatum|type=mRNA|length=7062bp|location=Sequence derived from alignment at Sc0000168:411099..418160+ (Branchiostoma lanceolatum)
ATGAGTCGATCAGCCGCTCCATCCAACCTCCGGCCGCTGGAGACTTTTCC
GCACCAGCCCATGTTAAAAAGAAAAGTCCACTTCAACATGACAAACATTT
GGAAAGTGCGGTAAGTTAGACACTTGTGTGATGTCTTGATATTAGTATTG
ACAATATTGATAAATCTTAGTTGAAAATTATTTTAACGACCTCGGGATGT
CTATATATGAGAAATAATATTTCGTTATAAGCCAGGGATACTAAACTGCA
GGGAAATTCCGTGCATTTTCGTCGTTTTACCTCTCCACAACCATGGATTG
AAATCTCACCAGGTTAATTCAATTTCTGTATTCTATTCTGTTGTATTCTT
GTTTTTCGTAGGGAAATTACCAGGAAATATTTTGATCCGAAGAAACACAT
TATCTATTTTTCGGACTTCGATATCTTCATGAGAGAATGCAACTCACTGA
AATTTACTCTTCGGGACTCACCTAAAAATCCCTGCAACGTTGTGCACACG
CCCATCAAGCACTATCGGACATGCGCAGTAGTGGGTAACGGAGGTATACT
TCTCGAAAGTAGGTGTGGTGCTGAGATAGACAGTCACGATTTCGTCATCC
GTTTTAACCAGCCACCAATACATGACTATCGGACGGATGTGGGCAGCAGG
ACCAACTTGACGCTTGTAAATGGAAAGCGGTTGAAAGAGATCAGCCGAAC
CCTTCAATCTATCTATGGCAAGACGTTGAAGACAGCCACGTCTCATAAGG
ATCTTCAGCTGTTTGAGTCACCTGGGATGATCTTTAGCTACCCATTTATC
TTTACTAAGAAAAGACAGGTTGAAATGCGGCTAATCGACACCGCCATCAA
AAATTACAACAAAACGACCATAACTGCTTTTCCGTCCACATCTTTCTTGG
ACAGCAAACGGTAGAGTACATTTTCATCAATATCACTTACATATAGAGGA
GTAGATTTGTTTGCATTTGAGACATTGTATTACTGTTTCCATTTTCATGT
TTATACCAGTGATTTTTGTGTTTGCTCTAATTCTAATGGTTGATTCGTTA
ATCAACATCTCTAGGGTTTACGAAGAACTTGTGGGGAAACATTGGAACTT
CACCTCGACTGGCCTGAACACCTTCGCCCTGGCCTCCACCTTCTGTGACA
AGATCTCCATGTACGGCTTCTACCCCATGCCTTTGTACCAGAGCAGGAGC
ATTCCCTACCACTACTACGACAAACGTCTGCCCAGCGGAAGTCATGATTT
TGACGGAGAGTATGCCATGTTGCAGCAACTGAATGTCGACGGAGTTATAA
GACATGTACTTGGAGAATGCAAGCCTGCAGCTGACGCTTGAACATGACTG
TACCCAATGTCTACCTACCAGGGACAAGCCCGTTCCCTGCCACTACAACG
ACAAGAACAGTCCCAGCCAAAGGCATGCTTCTGACGGAGAGTTTTGCCAC
GTTACGGCAACTGGATGCAGACGGAGTTATCAGACATGTCGTTGGAAAAT
GCAAGACTACAGCTGACGCTCCAACATGGCTGTAACACCCCCACGTACGC
TCTACAAACCACATGCATCTCTAACTATTAGCACTAGTACTATGCAGACA
AAAGTTCTCAATAGACCTCACACCTCCACATAAAATATGTGGAGCTTATG
TATGTGTCTATGTTGTGTTGATGTTTTGGTTGATTGATTGATCGATCGAT
CGATTGATTGATCAATCGATTGATGATCTCCATGTACGGCTTCTACCCCA
TGTCTAGATACCAGAACAAGCGCGTTCCCTACCACTACTACGACAAACTT
CCGCCCAGTGGCCGACATGACTTTGACGAGGAGTATGCCATGTTGCGGCA
AATGGATGCAGATGGAGTTATAAAACACGTAGTCGGGAAATGTAATATAC
ATTCTGAAAATACAATACGTTCTGGTAAGAATGTGAATGTGACAAAGCCA
ACACGAAGACGTTCATAGCAAAAGATGTAGACCTTCCTCTAATCCTCCTC
CCAGCACATAAAAGTCATATTTCAGGAGGTATGAATTCTTGATCTCATTT
CATGAGATATTGCCTTTTTTTGTCAGTGGCTGAATCAAAGGATAATGCAC
CTAAATATGATGATGCAGGTTTATGATTGCAAAAAATATGGCGAATGTTG
TAAGAGTATTGTGAGACAAAATAAGACATGGTATTGCAAATATTTGTGCA
GCGTAATATCATTGCTAACTTACCAATCTACGTATAGCTTCAACTGATCA
ACATTTTGAAACTTGCCGCCAATATAACTGTTACATAGAGACATCAAAGT
AATTAACTAGAGTTCAACAACCTCCTACCTTCGCCAAATGATGTTTAACT
TTTCGAGCGGCGTATTATGCATGTTTCTCATTGATTATCAAGTAAGCTTA
AGGTTCTCATTTGCATAGATTACATCAGTTGATCATTTTCTCTACCCAGA
TGACACAAGTTGTTTAGCGTATGAAAGTCTTATCATAGGAAAGAAGGCTA
TTGTATCATCCCCACATAAATTATGTAAATGAGGTCCTGATTTGCATGAT
TATATATGCAGATGATCACCTTTACTCAACTTTCAAATGTTATACTCAAC
TGCAAGTATGAAATTCCCGTCATTCATCTTGTATGAAATAATACTATTTA
CTATTGATCATGTAAATCAGGTATTCATTTGCTCTGATAGCTCCTGTTAT
TCACAATTAGTCCCCACTTGTGTAAACCGTCACTCCCGCTATCTGCATAC
CAAAAATCGTGACGTTCCGTCAACACCTTCTTGAGTTATTCTCTTTCAAA
GTCTCAAACAAACAAAATCGGCCCCTGTACCAAATCTGCACCACTTACTC
TCTGTTCTACGAGCTACGTGTTTCTTACTAAAACATTACTGATTTTTTAC
AGCCATTATTCATTGTTAACAGCAAAAGTAAGAGTAGTACAAACCTGTGA
ATAACACCATTAGCCGGTTGGGTAGCCAGTGTTTCACAGTCTCTTGCTGT
CAGTGGTTCTAATAGGCTACGTGGATCGCTTGGAAAGTAGTAGAAATTGA
CCAAATAGAGTGAATAGAATGCTAAGGGAGTCGGCTACGGATCCGGAGAT
AGGGACAGATCCGGAGATATCGAATCGCGAATTTATTGTCCCCATGTCTG
TAGCCGTCTCCCTTGCATTACTATTTGGCCAGTGTGAGACAGGGCTGCTA
GAAGCGGGATGTAATGAGGCTACCGGTTGGATTGCATTTTGATAACATCT
AGGAGGGAGATAAAGGGATATAACCCATTGATTACAAAGTTGTCAAACGG
GTTTTGGTGCAAGGTTACCACGTAGGTGTACACGAGTCACGAATACCATC
CGGTAATTTTAAGACGTTACTAGCTAGTTTTTGTCCCAGTAGAGTCCACG
TACAGCACAGTGTGCCAGGCATATAGACAAACCGAACGACGTGCTGTACA
AGGCCAGTTTACACTGAGCGACACTCCAGAGTTGTGGCCTGAAACGTCAG
TGTCGAGCCTGCGGCTTCAGCTACACGTACTTCCTTCTGGCACGAAGCCG
CTGGTGTGAATGCGTCACTCATATGACCTTGTGTCTTCATGGGTGAGTTG
ATTTACTGTTCCTATATATGATTAATGATTTCTCACTGGAAATAGAAATA
TAAGAAAGAAATGGTGTATCATAACTACTAAAAATGTTTCACATTAATCC
ACCTCAGACCAACCTAGTATTGACTATTGTCAGTTTTGTCAACCACATGC
ATTAGAGGAATATGATTTTTTGTAACCATTCCAGAATTCTGTTTATTGAC
AGACATTTGAGACATAGAAAGTAGATTGGTCGGAGTGAAAGGCTTGTCTG
TCTTCCAGCTCGTGCCAGGTGTTCGTAATTTCCAAGCAGATCTACACCGG
TACCGGTTCAAAAATCGTACAAGCTAGCCAGAGAAGGTCCAGTCAGGCAC
CGGTAGCCTGACTGGACCTTCTCTGGCCAGCTTGTACGATTTTTGAACCG
GTGTAGATCTGCTTGGAGATTACGAGATTACGGCGTTAGCCCCTTGATCC
TCTCTTCGTACGGGCTACCAACGAGGGGAAAGGCAAGACAGTATGATTAG
CACTATTGTTGCTATTGTAAACACACACAAAGATATTGTGCCCGAGGTAA
CTTTGGTAGCTGAGTGGGTCGAGGTTACTCCTATCTATGCATTTTAGAAC
ACGATTTACAGCGCGAAACTAGGTCAAGAGGTGTATCTTCTTGTCTTCCT
TTATATTAAAACTAGGGTGATACGATTTTTGTCCGTCAAGCATCAGCCAT
AAAGACTCGTTTTTTGTCAGAACACTTATAACAAAGACAACGTCTATGCG
TGTGCTCACCTGCTACGACCGTGGGAAACTAGCGATAGCTTACTCTGTGA
CTGCAGACATGTTCGCGTTGGTTTTATGTTCGCGGTTTTCGCGGTGACCG
TTTCACGGCGAACTTAAAACCACCGCGACTGAACATTTTTGTCCAGTACT
GTAGCAGTTTGTAACTGTAGCACTGTCGCGAACTTAAAATCACCGCGAAC
ACTCCATTTTCGCCTTGGCGCGAAATAAAACCACGCGAACTTAAATGCAT
TTACAGTAATACCTTCGCTAGGCGAAATTCATGTTTCGGGATCGTGTGTC
TGTTTGTGAGCATAACTGAAGTTGCTGATGGGGCGTTCTGGTAATTGGTC
TGTTCGTAGGGGTGGCAAAGGAAAAAAACAATTCGATCATGGGCCTCCTG
GCGACTTTTTACAGTACTGCAGTGGAACTTCCAGTTTTGACATCTCGAGT
AATACATAGATAGGTCTTGTGGCGGAGAGTAAGTGGTATAGGTTTGGGCT
CCCTGACGGCCTTCTTTGGAACTGTAGTGGATTGGTGAATTTTTCATTGT
TTTTGGTATGTAGGTACTTGTAGGTGATAATCGATTTAATAGAATTAATA
TCATGTTAATCAGGACCTTTTTAATCAGAAAATTGAGCAATGAGCAATTT
TAATGTAATTCAATAGTTGTAAATGACGAGTCGAACATTGTTAGTCACTA
ATCATGTAAATAATAGTCTTGAAATACCACGCAAAACTCATAATTGACAT
CCCTGTAACGTACAACGTGGTATAGTCCATACGCCATCCAAGGCAGCCTC
CATTGCAGGCTTTCTGGCTGGCGCCGGCGCCGTGGGATCAGTAATTACGA
TTTCTCCAGCCAAAGAACCTGGCCCCGATATGTTGAAAATCACAAATCAG
CTCTCCTCCCGAAAATGAATGCCAGCGCCGGCCAGAAAGCCTGCAACGGA
GGCTACATTCCAGCACTATAGTATCAGCTGTTGGACAGCGGGGGCAAGTT
CGAAAAATAGTGGGCCGTTGAAGAAAAGTTGCCTACTTTCACTTCTACAT
GTATCTCTCTGCTCATCTGTATTGTAATGTCTAATGAGACACAGTTATTT
GGCGAAGATATGAAGTCGTGGACTTCTAGTTGGACAATTTACATCTAACA
GTTGGTAACTTGGTTGCAGATCGGTTGACACCATTGACCACCAGGAGAGG
CGTCATGATCACACCATGTTTCTATGTAAGAATATTCTTCGGTATTAGCC
TGATCACCATCGCGATGTTTTGGGTGTACGAGCCAGCTGCCGACCTGCAC
CTGACGGTAAAGTTCGTCCGTCCACAGAACATGAGTCGACCAGCCACTCC
ATCCAACCTCCGGCCGCTGGAGACTTTTCCGCACCAGCCCATGTTAAAAA
GAAAAGTCCACTTCAACATGACAAACATTTGGAAATTGCGGTAAGTTAGA
CACTTGTGTGATGCCCTGATATTAGTGACGTTTTGATGATAGGTTCAACA
TTTGACTTTTGCTTGCATTGACAATATTGATAAATCTCTGATTGATAATT
GTTTTAAAGACCTCAGGATGTCTATATATGAGAAATAATATTTCGTTATA
AGCCGGGGATACTAAACTGCAGGGAAATTCCGTGCATTTTCGTCGTTTTA
CCTCTCCACAACCATGGATTGAAATCTCACCGGGTTAATTTGATTTCTTC
ACAGTTGTCGTATTCTTGTTTTTCGTAGGGAAATTACCAGGAAATATTTT
GATCCGAAGAAACACATTATTTATTTTTCGGACTTCGATATCTTCATGGA
AAAATGTGACTACCAAACGTTCACTCTTCGGGACTCGCCTGAAAGACCCT
GCAACGTTGTGCGCACGCCCATCAAGCACTATCGGACATGCGCAGTAGTG
GGTAACGGAGGTATACTTCTCGAAAGTAGGTGTGGTGCTGAGATAGACAG
TCACGACTTTGTCATCCGTTTAAACCAGCCACCAATACATGACTACCGGA
GGGATGTGGGCAGCAGGACCAACTTGACGCTTGTAAATGGAAAGCGGTTG
AAAGAGATCAGCCGAACCCTTCAATCTATCTATGGCAAGACGTTGAAGAC
AGCCACGTCTCATAAGGATCTTCAGCTGTTTGAGTCACCTGGGATGATCT
TTAGCTACCCATTTATCTTTACTAAGAAAAGACAGGCGGAAATGCGGGTA
ATCGACACTGCCATCAAAAATTACAACAAAACGACCATAACTGCTTTTCC
GTCCACGTCTTTCTTGGACAGCAAACGGTAGAGTACATTTCCATCAATAT
CACTTACATATAGAGGATTAGATTTTCATTTGATACATTGTATTACTGTT
TCCATTTTCATTTTTATAGAAGTTATTTTTGCGTTTGCTCTCACTTACAA
ATTTTAATGGTTGATTCGTTAATCAACATCTCTAGGGTTTACGAAGAACT
TGTGGGGAAACATTGGAACTTCACTTCGACGGGCCTGAACTCCTTCGCTC
TGGCCTCCACCTTCTGTGACAAGATCTCCATGTACGGCTTCTACCCCATG
CCTTTGTACCAGAGCAGGCGCTTTCCCTACCACTACTACGACAAGCGTCT
GCCCAGCGGAAGTCATGATTTTGACGGAGAGTTTGCCATGTTGCGGCAAC
TGGATGTCGACGGAGTTATAAGACATGTACTTGGAGAATGCAAGCCTGCA
GCTGACGCTTGA Coding sequence (CDS) from alignment at Sc0000168:411099..418160+ >transcript:BL95857_evm3 ID=transcript:BL95857_evm3|Name=transcript:BL95857_evm3|organism=Branchiostoma lanceolatum|type=CDS|length=936bp|location=Sequence derived from alignment at Sc0000168:411099..418160+ (Branchiostoma lanceolatum)
ATGAGTCGATCAGCCGCTCCATCCAACCTCCGGCCGCTGGAGACTTTTCC
GCACCAGCCCATGTTAAAAAGAAAAGTCCACTTCAACATGACAAACATTT
GGAAAGTGCGGGAAATTACCAGGAAATATTTTGATCCGAAGAAACACATT
ATTTATTTTTCGGACTTCGATATCTTCATGGAAAAATGTGACTACCAAAC
GTTCACTCTTCGGGACTCGCCTGAAAGACCCTGCAACGTTGTGCGCACGC
CCATCAAGCACTATCGGACATGCGCAGTAGTGGGTAACGGAGGTATACTT
CTCGAAAGTAGGTGTGGTGCTGAGATAGACAGTCACGACTTTGTCATCCG
TTTAAACCAGCCACCAATACATGACTACCGGAGGGATGTGGGCAGCAGGA
CCAACTTGACGCTTGTAAATGGAAAGCGGTTGAAAGAGATCAGCCGAACC
CTTCAATCTATCTATGGCAAGACGTTGAAGACAGCCACGTCTCATAAGGA
TCTTCAGCTGTTTGAGTCACCTGGGATGATCTTTAGCTACCCATTTATCT
TTACTAAGAAAAGACAGGCGGAAATGCGGGTAATCGACACTGCCATCAAA
AATTACAACAAAACGACCATAACTGCTTTTCCGTCCACGTCTTTCTTGGA
CAGCAAACGGGTTTACGAAGAACTTGTGGGGAAACATTGGAACTTCACTT
CGACGGGCCTGAACTCCTTCGCTCTGGCCTCCACCTTCTGTGACAAGATC
TCCATGTACGGCTTCTACCCCATGCCTTTGTACCAGAGCAGGCGCTTTCC
CTACCACTACTACGACAAGCGTCTGCCCAGCGGAAGTCATGATTTTGACG
GAGAGTTTGCCATGTTGCGGCAACTGGATGTCGACGGAGTTATAAGACAT
GTACTTGGAGAATGCAAGCCTGCAGCTGACGCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000168 | genome | Sc0000168:411099..418160 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95857_evm3 |
| Biotype | protein_coding |
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