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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95869_evm1 >transcript:BL95869_evm1-protein ID=transcript:BL95869_evm1-protein|Name=transcript:BL95869_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=297bp
MAVSVAVDEPGLLLEGPHWDSRTGTLLYVDIHGQHVHRWDPVTKQKDTYD
IDCMVGAVVPRESGGAVVAAGTKFAFLDFETRQLNTVATVDPHKPRNRFN
DGKCDAAGRFWAGTMGDEPVPTKVDRKAGSLYCLHTDGIVTKAFNEVDIS
NGLAWTSDNSIMYYIDSLLYSVDAFDFDLPTGMLRNRRQVKTFDPPVDGV
PDGMCIDTDGKLWIAMFDAGQVLQVDPETGTQLRSISFPAPRTTSCCFGG
PNLDIMYVTSSRVGYSAEEVQQKPLSGCVFQVTGLGARGTPGMCYNG Run BLAST on NCBI mRNA from alignment at Sc0000181:433158..436880- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95869_evm1 ID=transcript:BL95869_evm1|Name=transcript:BL95869_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3723bp|location=Sequence derived from alignment at Sc0000181:433158..436880- (Branchiostoma lanceolatum)
ATGGCGGTGTCAGTAGCTGTGGACGAGCCCGGGCTGCTTTTGGAAGGTCC
CCACTGGGACAGCCGCACGGGGACGCTACTGTACGTTGACATCCACGGAC
AACATGTCCACCGCTGGGATCCAGTCACAAAACAGAAGGACACGTATGAC
ATAGGTGAGTTTACATTTTACACATAGTTCTCAGTTACGCCAAGGTCCTA
TATAATGTCCTTGGTTACGCAGGATCATTTTAGAAACAAACTAAACGTAC
CCCAACCCACTGTGACCCCACCCGTAGGATAGAATAGTCCAAGTTCCCGG
AGGCTCAGTGGGGGTGTAGGGTGGGAGTGGTCGGTGAGGGCGGGCCGGTC
ATGGATTAATAATCTAAAGATAGACCTACTTTTACATTCGAAGGGAGAGC
CGAGTCTATAGTTGCATTTATTCCCATGTCTTTGTTTACTTTTTCCAAGG
AGGTTAAATATACTTAACCTCCTTGCTTTTTCAAAGTACATTTCCCTCCC
CTCTATAAATGAAATAACTCCAGATTGTGAAAATTATTTTGGCGACGAAC
CAGGAGCGGGGTCTTTCTTTGGTGCATTCGTTGATCTGACCAAGGGCATT
ATGCAGGACTTGCTCTGTCAGAACAACAGGGTTACTATGTCTTAGTTATC
AGCACACAGGCCATATATGTTCAATTGTGTCTTATAACAATTCATTCCTT
ATTATGTATGTAAAGAAAAATGTAGTGATTGCCTTTGTGAGTAACCAAAC
TTATGAATAGACCGTTGTATGAGGGTCTGCATGCTCTTTTCCATAAAGCA
TATGCAGTCTATCTTTGTTTCCCATAATTTGTAAGGAAAGTCATCTTATT
TACATAATTCGTAGCAAGGCACCCATATTTTGCATAATCACCTTCCTTGA
TTTTAGCGTGATATGTGAGGGACACTTCTGAATTCACCGTAAAGCATTGT
CCGGACCCCCATACAGACCCTCATGTTCTTGTTCGTTATTATTCTTCCAG
ACTGTATGGTAGGTGCCGTTGTCCCAAGGGAGTCAGGAGGGGCTGTAGTG
GCCGCTGGGACCAAGTTTGCCTTCCTAGACTTCGAGACCAGACAACTGAA
CACTGTTGCAACAGTGGACCCTCACAAACCCAGGAACAGGTTCAATGATG
GGAAGTGCGATGCTGCCGGCAGGTTTTGGGCTGGTAAGGAAAATCAAGTT
AGACATGTATAGTTTCTTTTCTTTGACTTGAGGTTTCAAGGTACCTCAGT
TTCTTAAGCTATTGAGGCTATGACGGAATGTGTTTAATTTTCCGGGTTCA
AAGTGACGAAGATATTCAGCAGAAAAGTTTTCGTTCACTTTTTAGAATAT
CTAGAAAGTCAAATTGATTGCTGGGGCAATGTGTCAATGATGCGCATCTT
AAGTCTTATTTTAACTTGTGTGCTCCTCCAATAATAGTACATACATTTGC
TATCTGCTTTGAACATGACACGTGTTGGCTGGAGGGAGAGAGCAGCCTTA
GTCCGGGGAAGCCGCCCGACATGATGATGATGATGAACTTGACATTAGAA
GATCTAATACACTGTAACCCACCGTACGTGGCTAGAATGTGCTATGCCTG
CTATTCTGTGCCAGCCTGCCTGAGCTGTAGATGATATGAGAATGTGTTTT
CAGGCACAATGGGTGACGAACCTGTCCCCACAAAAGTTGACCGCAAAGCT
GGATCCTTGTACTGTCTTCACACCGATGGAATTGTCACAAAGGTGAGGAC
AATTCATTTGTTTTAAGCAAGTTTCACATTTGTTCCAAAGGATATGGATA
TACTGAGTGAAACACAACTGTACATTGAACTTGAAGTTTTTGTCACAAGA
GTTCAGGTTACAGCATTTCTGAACCATATAGAATCAACTACACTGTACTA
TTCATCATATTGATTGTCTAGATTAGTATTAGATTTTGTTTTCAATAGGC
ATTTAATGAAGTTGACATCTCTAACGGCCTGGCCTGGACATCTGACAACT
CCATCATGTACTACATCGACTCACTCCTGTACAGCGTAGATGCCTTCGAC
TTTGACCTTCCCACTGGCATGCTGAGTATGTACCGTCTAACCATTTTACA
TAAAGAAACTCAGTATCGCCAGCAAATTTGTAAGGATGACTCTACTGAGA
GTTCTCCCTACTGGCATATATCTCTTTCTAGTTGATGCAACAGCCCCTGA
ACAGGCCTAACACTGGGTATTGAGTTAAACTGTTTCAAGAAGAAAACCCT
TTGCCTTTTATTTGTCAGCTTAGATCCACTCTACCAAATACTGGTTGAAA
AAAGAAAATATCTTAGTCTTACATACTTTTAGGTAACATTAATTCATAAA
TGATTATGTTTCCTCACAGATAATTGTTTATGCCTTCTGACTTTCAGTCT
GACCATGAATTGTCTACTATTGGAAATTCTTCCCTCAAATAACTGTAGAT
TTCCTTGTTGACAATATCAGCAATGAGCTGTCCATTGTCTCATGATGTTT
TATATGTCCATCATTGCCCACCATTGCAGGAAACCGTCGTCAAGTGAAGA
CCTTTGACCCACCGGTAGACGGCGTGCCTGATGGCATGTGTATCGACACG
GATGGGAAACTGTGGATAGCCATGTTTGATGCTGGTCAGGTGCTGCAGGT
GGACCCAGAGACAGGTTAGCAATGGAAATATGTACATGAATGAATTAATT
AATTTATGCATGATGTATGTAAATATGTGTATGGATGCAGCAGCGCTAAT
ATTTGGGCTTTCCCAGAGGAAAATGAACTACATGTACTACATAGCTCCAT
TCTTCGATGCAGAGCCTGAGATGTCCATGGCACTTCTGTAGGCGTGGCCG
CTAATGCTAGGGTCACATTTCCAATCCGGGGCCCGGCCGGGCAGTCTTTG
GGAACGAAAAATATGATATAAAAGACAACAAAAACACAAAACTTACCAAA
ATTATTTAAGAGCATAGCTGGTGCAAATTTATTGATATACACTTTGATTT
TTCGTTTCCGTAAACAGCCTGACCGGACCCCGGTTAGGAAATGTGACCCT
AGCATAACGAGATGTCAGTCAGGGTCTTAGGCAATTCTCTGGTTGGCTGA
TAGCTGGTTAGAGGCCACGCTAACTAAAGTAGAAACCTTAGTCTGGACTA
GCAGCTCTAGAGCCTTTCCAAGGTATGTTGTATAGGCTGTGGGTGAAGCT
CTGGGTAGGAGAATGCATTGCATTAGATTAATGGGTGTGTGACAGAGAAA
TTAATGTAGCTGAATGAAAGCGTCAGTGGCTATGAGCCTAAGTTTTTTTA
GAATGAAGCCATTATTATCCTCAAGATGGAAATCCTTTGATTTCTGTTAC
ATTGCATTTTAATTTCGGTTGATTGAAATTTATGTTATCATTTTTGTTAA
CCGGTGTACGTACAACTTTTCTGTACAAGATAGGTTCTTGCTGGATGTTT
CCCTTATTGTATTTGTTATCTTATTCTAAAAAACCAATGAAAAAAAAAAA
ATCTTATCTCACTGTAGGCACACAGCTTCGCTCCATCAGCTTTCCAGCTC
CTCGCACCACGTCGTGCTGTTTTGGAGGCCCTAACCTTGACATCATGTAC
GTGACAAGTTCACGGGTGGGTTACTCTGCCGAGGAGGTCCAGCAGAAGCC
TTTGTCTGGCTGTGTGTTCCAGGTGACCGGGCTAGGAGCCAGGGGCACCC
CCGGGATGTGCTACAATGGTTGA Coding sequence (CDS) from alignment at Sc0000181:433158..436880- >transcript:BL95869_evm1 ID=transcript:BL95869_evm1|Name=transcript:BL95869_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=5364bp|location=Sequence derived from alignment at Sc0000181:433158..436880- (Branchiostoma lanceolatum)
ATGGCGGTGTCAGTAGCTGTGGACGAGCCCGGGCTGCTTTTGGAAGGTCC
CCACTGGGACAGCCGCACGGGGACGCTACTGTACGTTGACATCCACGGAC
AACATGTCCACCGCTGGGATCCAGTCACAAAACAGAAGGACACGTATGAC
ATAGACTGTATGGTAGGTGCCGTTGTCCCAAGGGAGTCAGGAGGGGCTGT
AGTGGCCGCTGGGACCAAGTTTGCCTTCCTAGACTTCGAGACCAGACAAC
TGAACACTGTTGCAACAGTGGACCCTCACAAACCCAGGAACAGGTTCAAT
GATGGGAAGTGCGATGCTGCCGGCAGGTTTTGGGCTGGCACAATGGGTGA
CGAACCTGTCCCCACAAAAGTTGACCGCAAAGCTGGATCCTTGTACTGTC
TTCACACCGATGGAATTGTCACAAAGGCATTTAATGAAGTTGACATCTCT
AACGGCCTGGCCTGGACATCTGACAACTCCATCATGTACTACATCGACTC
ACTCCTGTACAGCGTAGATGCCTTCGACTTTGACCTTCCCACTGGCATGC
TGAGAAACCGTCGTCAAGTGAAGACCTTTGACCCACCGGTAGACGGCGTG
CCTGATGGCATGTGTATCGACACGGATGGGAAACTGTGGATAGCCATGTT
TGATGCTGGTCAGGTGCTGCAGGTGGACCCAGAGACAGGCACACAGCTTC
GCTCCATCAGCTTTCCAGCTCCTCGCACCACGTCGTGCTGTTTTGGAGGC
CCTAACCTTGACATCATGTACGTGACAAGTTCACGGGTGGGTTACTCTGC
CGAGGAGGTCCAGCAGAAGCCTTTGTCTGGCTGTGTGTTCCAGGTGACCG
GGCTAGGAGCCAGGGGCACCCCCGGGATGTGCTACAATGGTTGAATGGCG
GTGTCAGTAGCTGTGGACGAGCCCGGGCTGCTTTTGGAAGGTCCCCACTG
GGACAGCCGCACGGGGACGCTACTGTACGTTGACATCCACGGACAACATG
TCCACCGCTGGGATCCAGTCACAAAACAGAAGGACACGTATGACATAGAC
TGTATGGTAGGTGCCGTTGTCCCAAGGGAGTCAGGAGGGGCTGTAGTGGC
CGCTGGGACCAAGTTTGCCTTCCTAGACTTCGAGACCAGACAACTGAACA
CTGTTGCAACAGTGGACCCTCACAAACCCAGGAACAGGTTCAATGATGGG
AAGTGCGATGCTGCCGGCAGGTTTTGGGCTGGCACAATGGGTGACGAACC
TGTCCCCACAAAAGTTGACCGCAAAGCTGGATCCTTGTACTGTCTTCACA
CCGATGGAATTGTCACAAAGGCATTTAATGAAGTTGACATCTCTAACGGC
CTGGCCTGGACATCTGACAACTCCATCATGTACTACATCGACTCACTCCT
GTACAGCGTAGATGCCTTCGACTTTGACCTTCCCACTGGCATGCTGAGAA
ACCGTCGTCAAGTGAAGACCTTTGACCCACCGGTAGACGGCGTGCCTGAT
GGCATGTGTATCGACACGGATGGGAAACTGTGGATAGCCATGTTTGATGC
TGGTCAGGTGCTGCAGGTGGACCCAGAGACAGGCACACAGCTTCGCTCCA
TCAGCTTTCCAGCTCCTCGCACCACGTCGTGCTGTTTTGGAGGCCCTAAC
CTTGACATCATGTACGTGACAAGTTCACGGGTGGGTTACTCTGCCGAGGA
GGTCCAGCAGAAGCCTTTGTCTGGCTGTGTGTTCCAGGTGACCGGGCTAG
GAGCCAGGGGCACCCCCGGGATGTGCTACAATGGTTGAATGGCGGTGTCA
GTAGCTGTGGACGAGCCCGGGCTGCTTTTGGAAGGTCCCCACTGGGACAG
CCGCACGGGGACGCTACTGTACGTTGACATCCACGGACAACATGTCCACC
GCTGGGATCCAGTCACAAAACAGAAGGACACGTATGACATAGACTGTATG
GTAGGTGCCGTTGTCCCAAGGGAGTCAGGAGGGGCTGTAGTGGCCGCTGG
GACCAAGTTTGCCTTCCTAGACTTCGAGACCAGACAACTGAACACTGTTG
CAACAGTGGACCCTCACAAACCCAGGAACAGGTTCAATGATGGGAAGTGC
GATGCTGCCGGCAGGTTTTGGGCTGGCACAATGGGTGACGAACCTGTCCC
CACAAAAGTTGACCGCAAAGCTGGATCCTTGTACTGTCTTCACACCGATG
GAATTGTCACAAAGGCATTTAATGAAGTTGACATCTCTAACGGCCTGGCC
TGGACATCTGACAACTCCATCATGTACTACATCGACTCACTCCTGTACAG
CGTAGATGCCTTCGACTTTGACCTTCCCACTGGCATGCTGAGAAACCGTC
GTCAAGTGAAGACCTTTGACCCACCGGTAGACGGCGTGCCTGATGGCATG
TGTATCGACACGGATGGGAAACTGTGGATAGCCATGTTTGATGCTGGTCA
GGTGCTGCAGGTGGACCCAGAGACAGGCACACAGCTTCGCTCCATCAGCT
TTCCAGCTCCTCGCACCACGTCGTGCTGTTTTGGAGGCCCTAACCTTGAC
ATCATGTACGTGACAAGTTCACGGGTGGGTTACTCTGCCGAGGAGGTCCA
GCAGAAGCCTTTGTCTGGCTGTGTGTTCCAGGTGACCGGGCTAGGAGCCA
GGGGCACCCCCGGGATGTGCTACAATGGTTGAATGGCGGTGTCAGTAGCT
GTGGACGAGCCCGGGCTGCTTTTGGAAGGTCCCCACTGGGACAGCCGCAC
GGGGACGCTACTGTACGTTGACATCCACGGACAACATGTCCACCGCTGGG
ATCCAGTCACAAAACAGAAGGACACGTATGACATAGACTGTATGGTAGGT
GCCGTTGTCCCAAGGGAGTCAGGAGGGGCTGTAGTGGCCGCTGGGACCAA
GTTTGCCTTCCTAGACTTCGAGACCAGACAACTGAACACTGTTGCAACAG
TGGACCCTCACAAACCCAGGAACAGGTTCAATGATGGGAAGTGCGATGCT
GCCGGCAGGTTTTGGGCTGGCACAATGGGTGACGAACCTGTCCCCACAAA
AGTTGACCGCAAAGCTGGATCCTTGTACTGTCTTCACACCGATGGAATTG
TCACAAAGGCATTTAATGAAGTTGACATCTCTAACGGCCTGGCCTGGACA
TCTGACAACTCCATCATGTACTACATCGACTCACTCCTGTACAGCGTAGA
TGCCTTCGACTTTGACCTTCCCACTGGCATGCTGAGAAACCGTCGTCAAG
TGAAGACCTTTGACCCACCGGTAGACGGCGTGCCTGATGGCATGTGTATC
GACACGGATGGGAAACTGTGGATAGCCATGTTTGATGCTGGTCAGGTGCT
GCAGGTGGACCCAGAGACAGGCACACAGCTTCGCTCCATCAGCTTTCCAG
CTCCTCGCACCACGTCGTGCTGTTTTGGAGGCCCTAACCTTGACATCATG
TACGTGACAAGTTCACGGGTGGGTTACTCTGCCGAGGAGGTCCAGCAGAA
GCCTTTGTCTGGCTGTGTGTTCCAGGTGACCGGGCTAGGAGCCAGGGGCA
CCCCCGGGATGTGCTACAATGGTTGAATGGCGGTGTCAGTAGCTGTGGAC
GAGCCCGGGCTGCTTTTGGAAGGTCCCCACTGGGACAGCCGCACGGGGAC
GCTACTGTACGTTGACATCCACGGACAACATGTCCACCGCTGGGATCCAG
TCACAAAACAGAAGGACACGTATGACATAGACTGTATGGTAGGTGCCGTT
GTCCCAAGGGAGTCAGGAGGGGCTGTAGTGGCCGCTGGGACCAAGTTTGC
CTTCCTAGACTTCGAGACCAGACAACTGAACACTGTTGCAACAGTGGACC
CTCACAAACCCAGGAACAGGTTCAATGATGGGAAGTGCGATGCTGCCGGC
AGGTTTTGGGCTGGCACAATGGGTGACGAACCTGTCCCCACAAAAGTTGA
CCGCAAAGCTGGATCCTTGTACTGTCTTCACACCGATGGAATTGTCACAA
AGGCATTTAATGAAGTTGACATCTCTAACGGCCTGGCCTGGACATCTGAC
AACTCCATCATGTACTACATCGACTCACTCCTGTACAGCGTAGATGCCTT
CGACTTTGACCTTCCCACTGGCATGCTGAGAAACCGTCGTCAAGTGAAGA
CCTTTGACCCACCGGTAGACGGCGTGCCTGATGGCATGTGTATCGACACG
GATGGGAAACTGTGGATAGCCATGTTTGATGCTGGTCAGGTGCTGCAGGT
GGACCCAGAGACAGGCACACAGCTTCGCTCCATCAGCTTTCCAGCTCCTC
GCACCACGTCGTGCTGTTTTGGAGGCCCTAACCTTGACATCATGTACGTG
ACAAGTTCACGGGTGGGTTACTCTGCCGAGGAGGTCCAGCAGAAGCCTTT
GTCTGGCTGTGTGTTCCAGGTGACCGGGCTAGGAGCCAGGGGCACCCCCG
GGATGTGCTACAATGGTTGAATGGCGGTGTCAGTAGCTGTGGACGAGCCC
GGGCTGCTTTTGGAAGGTCCCCACTGGGACAGCCGCACGGGGACGCTACT
GTACGTTGACATCCACGGACAACATGTCCACCGCTGGGATCCAGTCACAA
AACAGAAGGACACGTATGACATAGACTGTATGGTAGGTGCCGTTGTCCCA
AGGGAGTCAGGAGGGGCTGTAGTGGCCGCTGGGACCAAGTTTGCCTTCCT
AGACTTCGAGACCAGACAACTGAACACTGTTGCAACAGTGGACCCTCACA
AACCCAGGAACAGGTTCAATGATGGGAAGTGCGATGCTGCCGGCAGGTTT
TGGGCTGGCACAATGGGTGACGAACCTGTCCCCACAAAAGTTGACCGCAA
AGCTGGATCCTTGTACTGTCTTCACACCGATGGAATTGTCACAAAGGCAT
TTAATGAAGTTGACATCTCTAACGGCCTGGCCTGGACATCTGACAACTCC
ATCATGTACTACATCGACTCACTCCTGTACAGCGTAGATGCCTTCGACTT
TGACCTTCCCACTGGCATGCTGAGAAACCGTCGTCAAGTGAAGACCTTTG
ACCCACCGGTAGACGGCGTGCCTGATGGCATGTGTATCGACACGGATGGG
AAACTGTGGATAGCCATGTTTGATGCTGGTCAGGTGCTGCAGGTGGACCC
AGAGACAGGCACACAGCTTCGCTCCATCAGCTTTCCAGCTCCTCGCACCA
CGTCGTGCTGTTTTGGAGGCCCTAACCTTGACATCATGTACGTGACAAGT
TCACGGGTGGGTTACTCTGCCGAGGAGGTCCAGCAGAAGCCTTTGTCTGG
CTGTGTGTTCCAGGTGACCGGGCTAGGAGCCAGGGGCACCCCCGGGATGT
GCTACAATGGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000181 | genome | Sc0000181:433158..436880 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95869_evm1 |
| Biotype | protein_coding |
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