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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95875_evm2 >transcript:BL95875_evm2-protein ID=transcript:BL95875_evm2-protein|Name=transcript:BL95875_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=190bp
MCTPPSTSMSVIGSPSERELNALENTVISVLFSDDEEEDWTDDECEDLDW
IDDKSADPDYEPTARIKAALKVPSNFNIEDLEVSTAEEEVYDHLGDDVET
DEEEVEEDNGGKEINSTSPKHSAPQVEVKVEREEDLIGEKCCLAYKQCLL
ELVKFLDSGRSCSEPGYLFLWPETMDMAITAKVQIWFAGG Run BLAST on NCBI mRNA from alignment at Sc0000189:574884..576144- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95875_evm2 ID=transcript:BL95875_evm2|Name=transcript:BL95875_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=1261bp|location=Sequence derived from alignment at Sc0000189:574884..576144- (Branchiostoma lanceolatum)
ATGTGCACACCACCCAGCACTTCCATGTCTGTGATTGGGAGTCCATCAGA
AAGAGAACTGAATGCCCTGGAAAACACTGTGTGAGTATAAACTTGTTTTA
TCCTGTATCTTGAAATAGATTATGATACGACAGAGATAAAGGGAAGCATG
GTGAATTTTCCTTTTCTAGACTTTTGTTGACTAGTAGTAGTAAAGCATAG
TCTGAATATACATTTGTAACATTATTTCCTTGTTTTATGTTGATACTTCA
AAAATGCAATTAATTTTTTTGCATCTGTATCCATTGTGTATCTAGGATTT
CAGTATTGTTTTCTGACGATGAAGAAGAAGACTGGACAGATGACGAATGT
GAAGATCTAGACTGGATAGATGACAAGAGTGCCGATCCTGACTACGAACC
CACCGCAAGAATTAAGTAGGTCGATAAGTGTACTTACCTTGGAAGTAGTG
TGTGCCTTTGGAATACCTATCTTCATTATCTGTATGTATTTTACTTGTTC
TGGCACAGGTACACTTGATGTTCAGGTCTAGACATTGTACCATTAAACAA
AATATAGACATTGTAATTGTTTAACAGTCAGGTTTCTGTTTCATGATGTT
GTGTGATTTCCATGACCTTAAATGCAGTTTTCTTGTAATCTATGTTCTAG
GGCAGCACTCAAAGTACCTTCAAATTTCAACATAGAAGATTTGGAAGTAA
GCACAGCTGAGGAGGAGGTTTATGATCACCTGGGTGATGATGTTGAGACA
GATGAGGAGGAAGTTGAGGAGGATAATGGTGGGAAGGAAATCAACAGCAC
AAGCCCCAAACACAGCGCACCTCAAGTTGAGGTGAAAGTGGAGAGGGAGG
AGGATCTTATAGGGGAGAAATGCTGCCTTGCATACAAGCAGTGCCTTTTA
GAGCTGGTCAAGTTCCTGGACAGTGGGAGGTCCTGTTCAGAGCCAGGATG
TAAGGGCAAAGTTGAGCCACAGACCAGGATGGTTGGCACCGCCATGGTCA
TAGAATCTGTAAGACAATCTTATTATGTTTCCTGACCAACTTAATTTGTC
TATGTTTCATTTTGGCAGAAATCTATGTTGCTATATGTCAATGTCAACAT
ATGCAATGATAGATCATCTTTTACAGTGCTAGTCTGTTGACTGTTAATGG
TGCTTGAACATTTTTTTTTAAAATTCTGTTTCTGCAGATCTGTTCCTGTG
GCCAGAAACAATGGATATGGCGATCACAGCCAAGGTTCAAATTTGGTTTG
CAGGCGGGTGA Coding sequence (CDS) from alignment at Sc0000189:574884..576144- >transcript:BL95875_evm2 ID=transcript:BL95875_evm2|Name=transcript:BL95875_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=2292bp|location=Sequence derived from alignment at Sc0000189:574884..576144- (Branchiostoma lanceolatum)
ATGTGCACACCACCCAGCACTTCCATGTCTGTGATTGGGAGTCCATCAGA
AAGAGAACTGAATGCCCTGGAAAACACTGTGATTTCAGTATTGTTTTCTG
ACGATGAAGAAGAAGACTGGACAGATGACGAATGTGAAGATCTAGACTGG
ATAGATGACAAGAGTGCCGATCCTGACTACGAACCCACCGCAAGAATTAA
GGCAGCACTCAAAGTACCTTCAAATTTCAACATAGAAGATTTGGAAGTAA
GCACAGCTGAGGAGGAGGTTTATGATCACCTGGGTGATGATGTTGAGACA
GATGAGGAGGAAGTTGAGGAGGATAATGGTGGGAAGGAAATCAACAGCAC
AAGCCCCAAACACAGCGCACCTCAAGTTGAGGTGAAAGTGGAGAGGGAGG
AGGATCTTATAGGGGAGAAATGCTGCCTTGCATACAAGCAGTGCCTTTTA
GAGCTGGTCAAGTTCCTGGACAGTGGGAGGTCCTGTTCAGAGCCAGGATA
TCTGTTCCTGTGGCCAGAAACAATGGATATGGCGATCACAGCCAAGGTTC
AAATTTGGTTTGCAGGCGGGTGAATGTGCACACCACCCAGCACTTCCATG
TCTGTGATTGGGAGTCCATCAGAAAGAGAACTGAATGCCCTGGAAAACAC
TGTGATTTCAGTATTGTTTTCTGACGATGAAGAAGAAGACTGGACAGATG
ACGAATGTGAAGATCTAGACTGGATAGATGACAAGAGTGCCGATCCTGAC
TACGAACCCACCGCAAGAATTAAGGCAGCACTCAAAGTACCTTCAAATTT
CAACATAGAAGATTTGGAAGTAAGCACAGCTGAGGAGGAGGTTTATGATC
ACCTGGGTGATGATGTTGAGACAGATGAGGAGGAAGTTGAGGAGGATAAT
GGTGGGAAGGAAATCAACAGCACAAGCCCCAAACACAGCGCACCTCAAGT
TGAGGTGAAAGTGGAGAGGGAGGAGGATCTTATAGGGGAGAAATGCTGCC
TTGCATACAAGCAGTGCCTTTTAGAGCTGGTCAAGTTCCTGGACAGTGGG
AGGTCCTGTTCAGAGCCAGGATATCTGTTCCTGTGGCCAGAAACAATGGA
TATGGCGATCACAGCCAAGGTTCAAATTTGGTTTGCAGGCGGGTGAATGT
GCACACCACCCAGCACTTCCATGTCTGTGATTGGGAGTCCATCAGAAAGA
GAACTGAATGCCCTGGAAAACACTGTGATTTCAGTATTGTTTTCTGACGA
TGAAGAAGAAGACTGGACAGATGACGAATGTGAAGATCTAGACTGGATAG
ATGACAAGAGTGCCGATCCTGACTACGAACCCACCGCAAGAATTAAGGCA
GCACTCAAAGTACCTTCAAATTTCAACATAGAAGATTTGGAAGTAAGCAC
AGCTGAGGAGGAGGTTTATGATCACCTGGGTGATGATGTTGAGACAGATG
AGGAGGAAGTTGAGGAGGATAATGGTGGGAAGGAAATCAACAGCACAAGC
CCCAAACACAGCGCACCTCAAGTTGAGGTGAAAGTGGAGAGGGAGGAGGA
TCTTATAGGGGAGAAATGCTGCCTTGCATACAAGCAGTGCCTTTTAGAGC
TGGTCAAGTTCCTGGACAGTGGGAGGTCCTGTTCAGAGCCAGGATATCTG
TTCCTGTGGCCAGAAACAATGGATATGGCGATCACAGCCAAGGTTCAAAT
TTGGTTTGCAGGCGGGTGAATGTGCACACCACCCAGCACTTCCATGTCTG
TGATTGGGAGTCCATCAGAAAGAGAACTGAATGCCCTGGAAAACACTGTG
ATTTCAGTATTGTTTTCTGACGATGAAGAAGAAGACTGGACAGATGACGA
ATGTGAAGATCTAGACTGGATAGATGACAAGAGTGCCGATCCTGACTACG
AACCCACCGCAAGAATTAAGGCAGCACTCAAAGTACCTTCAAATTTCAAC
ATAGAAGATTTGGAAGTAAGCACAGCTGAGGAGGAGGTTTATGATCACCT
GGGTGATGATGTTGAGACAGATGAGGAGGAAGTTGAGGAGGATAATGGTG
GGAAGGAAATCAACAGCACAAGCCCCAAACACAGCGCACCTCAAGTTGAG
GTGAAAGTGGAGAGGGAGGAGGATCTTATAGGGGAGAAATGCTGCCTTGC
ATACAAGCAGTGCCTTTTAGAGCTGGTCAAGTTCCTGGACAGTGGGAGGT
CCTGTTCAGAGCCAGGATATCTGTTCCTGTGGCCAGAAACAATGGATATG
GCGATCACAGCCAAGGTTCAAATTTGGTTTGCAGGCGGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000189 | genome | Sc0000189:574884..576144 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95875_evm2 |
| Biotype | protein_coding |
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