transcript:BL95879_evm0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95879_evm0
Unique Nametranscript:BL95879_evm0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95879_evm0

>transcript:BL95879_evm0-protein ID=transcript:BL95879_evm0-protein|Name=transcript:BL95879_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=142bp
MFVKSGFAAVFVAVTLALSHSGTSLACEGPVTYFSGKQTIRDDLGIDGAL
LRDQDTSSYNAYKVWYLPRYTGNTIEEYRTMDDFAAGKVVTTYRLPGSTG
SGGMAWWGQGHVVYNNALYFQRFPDCLSYSYDCSSEKAQIVS
Run BLAST on NCBI

mRNA from alignment at Sc0000191:348986..350558+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95879_evm0 ID=transcript:BL95879_evm0|Name=transcript:BL95879_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1573bp|location=Sequence derived from alignment at Sc0000191:348986..350558+ (Branchiostoma lanceolatum)
ATGTTTGTGAAATCTGGTTTTGCCGCCGTCTTTGTCGCCGTCACTTTGGC GTTGTCACATTCAGGTGAGTTGTCATACCGTCTGATGTTTCCCTTGATAT ACAATATCGTGGAATATTTAAGAGCTCTTTTCAATCAAAGATAAACGTTG AAAATTATTTCGTTTTTTTTTGTGTAGTAACCCTAATTTGAAAATGTATT CCGATGCATTACATACTAGAAACAAGCAAATACAAAGTATATTATAAGAA ATGTTGTAAAATGTGGTGCGTCGGTCATTTTTGACGAGGACCGCTGTCAT CCATCATTTGACTGTGTTGCATGTGTCTCATGAGTTCTCATGTGGCTGTA TGGGTCTTATTTTGGCCCTGAACCCCCGGCCGTAGTGTTCACATTGGATC AGGGTCGTGCTCTGTAAGGGGCTGACTCTCCGTTCCTTCCTACCTGGCTG GGGCTGCATTAGAACATAAGAAATGTTGTAAAATACATAGCGTAGAGCAT TACATATTCTGACAATGTTTCCAAACTTTCGATGCGACACAGATAAACTC AGATTCCATGCCAGTATGACTTTACTCATTGATATTCTATGTTGAATCTG TTGTAGGCACATCCCTTGCCTGTGAGGGTCCGGTAACGTATTTCTCCGGA AAACAGACGATCCGAGACGACCTCGGAATCGACGGCGCTCTCCTGCGAGA CCAGGACACCTCGTCCTACAACGCTTACAAAGTCTGGTACCTGCCCAGGT ACACCGGGAACACGATCGAGGAGTACCGCACGATGGACGACTTTGCTGCG GGGAAGGTCGTCACCACATACCGCCTGCCTGGGTCAACAGGAAGCGGTGG GATGGCGTGGTGGGGACAGGGTCATGTCGTCTACAACAACGCCCTCTACT TCCAACGATTCCCCGACTGCCTGTCGTACAGTTATGACTGTAGCAGCGAA AAGGCGCAGATAGTCAGGTACGACTTTAGTCTCAGGGCTTTTACGGCGCT CCAAGCCCTCCCTACCGCTCAGCTCTCCCACTGGGCCGCGGGCCCTTCTT ACGTCTACCTCGCCGTCGATGCGGGTAGTCTGTGGGCTACCGGCCTTAAC AGCGGTATATTCCAGCTGACTAAGCTTAACGCACACGACCTTAGTGTAGA AGAGGTCATAGACACAGAATTCGCAGACCCGTCTTCAAACATGCCTCCGT TTATTGCCTGTGGGAAATTCTATAGCACAGTGCCCGATCGTGCAGTTCAA TACGGCCCACTGGGATCCCGAACCACTCTTATTCTCGATCTAACCACTAA GCAGAAAGACACGTCGACGCGAGCCTGGTATTGTTTGCCAACTGAAGGTC GACGCTATTTCTCGATCAATTCTCGCGAGAACAAAGTGTACACAGTCGAG TCGAATACGTTGGTCAGCTATGACGTAACCTTTGGCGGATCATATCTAAC TGACCCCGCTACATGTTCTGTTTAATGCGAGTTCACAATTAATCATACTC TAACACTGTAAACATTTAGCTCTATGGAACCTCGTTCAATAACGTTCATG TTTTTGTCTTATACGGCAGCTGA

Coding sequence (CDS) from alignment at Sc0000191:348986..350558+

>transcript:BL95879_evm0 ID=transcript:BL95879_evm0|Name=transcript:BL95879_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=429bp|location=Sequence derived from alignment at Sc0000191:348986..350558+ (Branchiostoma lanceolatum)
ATGTTTGTGAAATCTGGTTTTGCCGCCGTCTTTGTCGCCGTCACTTTGGC
GTTGTCACATTCAGGCACATCCCTTGCCTGTGAGGGTCCGGTAACGTATT
TCTCCGGAAAACAGACGATCCGAGACGACCTCGGAATCGACGGCGCTCTC
CTGCGAGACCAGGACACCTCGTCCTACAACGCTTACAAAGTCTGGTACCT
GCCCAGGTACACCGGGAACACGATCGAGGAGTACCGCACGATGGACGACT
TTGCTGCGGGGAAGGTCGTCACCACATACCGCCTGCCTGGGTCAACAGGA
AGCGGTGGGATGGCGTGGTGGGGACAGGGTCATGTCGTCTACAACAACGC
CCTCTACTTCCAACGATTCCCCGACTGCCTGTCGTACAGTTATGACTGTA
GCAGCGAAAAGGCGCAGATAGTCAGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95879gene:BL95879Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95879_evm0-E1BL95879_evm0-E1-1564476830-378419Branchiostoma lanceolatumexon
BL95879_evm0-E2BL95879_evm0-E2-1564476830-378421Branchiostoma lanceolatumexon
BL95879_evm0-E3BL95879_evm0-E3-1564476830-378423Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95879_evm0transcript:BL95879_evm0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000191genomeSc0000191:348986..350558 +
Properties
Property NameValue
Transcript idBL95879_evm0
Biotypeprotein_coding