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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95880_evm0 >transcript:BL95880_evm0-protein ID=transcript:BL95880_evm0-protein|Name=transcript:BL95880_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=284bp
MATVDPDAENEARRILDITEGFMKSQILFTSFKLGVFDLLDTSEAPMTAV
RIAEAIRTDTDATKRLLNACAGLGLLQKVNVDKETGDGWYQLTKASREFL
TSSSPTNMGDSVKIRASFYQSPWGHLQRALEEGPASVRRQNQDNIGDNFK
ILFSNKTFMGAMAAMVTIFGARTASAFDLSEFKRICDIRGDFFQDPLPPA
DLYVVCRILHDWAEDKILTLLTKMHDSLPPGGGVLIVEHMLDDDKTGPEV
AHNFDLSMLLMGAGRERSGREFKRLLIMVGFKEW Run BLAST on NCBI mRNA from alignment at Sc0000192:497497..502043+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95880_evm0 ID=transcript:BL95880_evm0|Name=transcript:BL95880_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4547bp|location=Sequence derived from alignment at Sc0000192:497497..502043+ (Branchiostoma lanceolatum)
ATGGCGACCGTGGATCCAGATGCGGAAAACGAGGCTCGACGGATTCTTGA
CATCACTGAAGGTTTTATGAAGTCACAGGTGAGCTACTTTGCAATAATTG
AATATGTTTGACTGTGGGTGCCAAAGTCCTTGCCAGATTTGATTGATTCT
TCATTCGTGCACACATAATTTATTCGCGCGACTGTGTGCGTCAGTGTGAG
TGTGTGTGTGTCAGTGTGTGTGTGCGTACGTCTGTGTGTGCGCGCGAGCC
GTGTGCGTGCGTGCGTTTATGTGTGTGTGTGCGTCTGTGTGTGTTTAAAC
TCGATCCGTATGGGATTTGGTATGTTGGAATGTGCTGGCAAAGCGAATTC
GAAGGACCAATTCGATCATGGGCCTTCCAACGACTTGCTATGGTACTGCA
GAAGAACTACGGGTTTTGATATGTCGTATTCTAAACAAGCTATGGTCATG
GTTAGCCTGTATTCACACAAACTCTCGGCCGGAGGTTACTGACCCCCACA
TCACATCTAGGGGGATGGCGGTTACAGGACCGGCTGGCCGCTAGGAGCGC
GATTCGTCATGCTATGGTCATGGTATTTTGTAATTTCATACTTGTGGCGT
TTGGAAGTAGGGTAAATGTGAACATTATAAGACATAAACCATGAAAGTCA
GGACCTCATTTGCATGATCGATAAGAATGTGCTACAATGACCTTGATTAT
TTGCCAATCTAAATATACTTGGACTTTCATACTTTGAACAGTCTGTGTTG
TTTGGGTAGAGATTACATCATCTGATAGAATTGATTCAAACGGGGACCTT
ATTTGCACAATCAATGAGGAAACTTTATACTGGTCGGTCGTGAAGATCAT
TTGGCGAATGTATGAAGTTGTGGATTTTTTGCTCCACTAAACCGTCGAAT
GCTGTGAGTAGTGTGTAATGTCATTTTTTTCATATCGAAATACAAGTATG
TCGAAGCGATTTTTCAGTAAGAAGTTTGCATTTAGGGCTTTAGAAACAGC
AGAAAAAATTCCATTCACACATTCCTATCCTTGATAGTTTGTATAATCCT
ATTTGTTTCCCTTTTATCTTGCTGAAGATCTTATTCACCAGTTTTAAATT
GGGAGTCTTCGACCTTCTGGACACGTCAGAGGCTCCTATGACTGCTGTGA
GGATAGCTGAAGCCATCCGAACTGACACTGACGCCACCAAGCGGCTGCTT
AACGCATGTGCAGGTCTGGGTCTGTTACAGAAGGTGAATGTGGACAAAGA
AACAGGTACAGTAAACAATACATTGTCTTGAACTCCACTAAGCTAAAAGA
CATTCTCATGAGCAGTACCCCCGGCCATTTCCACTACAAATTGCGACCGC
TAAACCACCAAGAATTTGACAGATCACTCAAAGAATTCCATAGATAAAGA
CTTTTTCACGTATTGTGTTTTATTGTTTTTCGAATCCACTCTCCAAGCAG
AGATTGGTGGGGAAGATTCTGACTTTCTTCTTATTTGCGCCCGAAAATGG
TGAGATGATGAGAAGGTCACAGTCTTCCCCACCAACCCCCTGCTTGCTGT
GTAAAATCGTGCATCATGTCAAGTAAGGATCCCACAAATTCAATTTTTTG
TCGTTTAACATTTGCGCAACTATCGCCATCTAATGGAAAGGTGACCTCTG
CAGTAAAAGAAAGTTTTCAAATTTACAGGTGGTTAGGTCATGATATGTTC
GATGTTTTTTTAATCTTATTTTCATATGTACAGGGGACGGTTGGTACCAG
CTCACTAAGGCCAGCAGGGAGTTCCTAACATCATCGAGCCCAACAAACAT
GGGAGACTCGGTCAAAATCCGGGCATCTTTTTACCAGTCTCCATGGGGGC
ACCTCCAAAGAGCACTAGAGGAAGGGCCGGCGTCCGTCCGTCGGCAAAAC
CAGGACAACATTGGCGATAATTTCAAGATCTTGTTGTACGAAATATTACA
TAATTATGTTTTTAGAATATTCTAGAATCGGAGAGTCATTGTATCTATTG
TTGCAGCTCCTGCGTACTTGATAAATCTCAAACTGCTGATAGTTTAGGTA
ATTTTAAACTGGCAATTGGCGATCCCCCAATATGCACGACAATTATGGCA
CCAACTGTTCATACAATTAAAATAATGACGCTTAAAATCGATTTCATCTC
CTACTAGTACTTCTATTATCTTTGTGTTTCAGCTCAAACAAAACCTTCAT
GGGTGCGATGGCGGCAATGGTGACTATCTTTGGTGCGAGGACCGCCTCTG
CGTTCGATCTTTCGGAATTTAAGAGAATTTGTGACATCAGAGGTAATGAC
TTCATCTAGACCATGACAAAATAGTTTAATTTAAGTCGAATTGTTTCTCG
CGATCGGTAAGTCTAACAGTGCACAAAATTCCTATCCTATTCTCATTGAT
ACCTTAATATTACCATGATCATAGTAGAAGGGAATTGTAGTTCAACTTGT
TGTTCAGGCGTGTTTCAGTTGTTAAGTAATGGAATATTGAAAATTGAAAT
AAATCCTCGACTACAAAGTCAATTGTTGTTTTACAGGCTGTACCGGGCCC
CTTGCCTACCACCTTGCTGCTGCCTACCCAAACGCTGCTGTCTCAGTTTT
TGACCTGCCTGAAGTCGTGAAGGTTGCAGAGGACAGAAGGCCTGTTGGCG
AACATGCTCAGCGGGTCTCTTTCATTCCAGGTTGGGAGAAATTTAAACGT
CCTGAGTAGATTGTGACCATTATGTAGATTAAGAACATATCTAATAAGCA
GGTTCACAGTTTAAACTGCGCATGTGCAGAGACATGCATGGAGGGTAATA
TGGCAAAATCGAAGGCCTTTCGGATGGTGACGAAAGCTGTTCAACCTTCT
TTCCGCCTGCTCAACAGAATTTGATGCATTCCATTCTATAGATAAATTCA
AATACATTCTAGAAGGAGACAACCCTTACTGTGTACAAATAGGTAAATAT
ATCAGAGAATGTTTAGATCTTAAAACTAGTAGTGTAAGTGATAGTTTAAA
CTCGACATGTTAAAGTATTCATATACTTGTTATACTTGTACTAAGGTGAA
TTATTTTGTATCCCATTGTTGTTGTTTGCATGTTTAGTTGTAGAAGACCT
TACGGAAGTCGCTGTACTTTTGTTGTGTCAATAAAGATTTCTCACGTAAA
GCCGGCGGCCCCGTGTATGAGGGAGCTTCAGGCATTAGCCTCAAGCATCA
AACCTCTGCACGTAAAAGAACCCAACACACTTATCGAGAAGAGTAGGGGT
CCGGTGTGCTTGGCCAAAAAACGCGAGCCGTGGCAAATTAAGCCGCATTG
CATTACCACTAGCTACTTGAAAAAGCATCATGCTTCACCTCAATTGAGGA
TGCCTTGAAACGAAAGAAAAACGAAGGCGCCTGGGACAAAATGACATTTA
AAAATGAGGATATATGAAATGATAACAGAAGTTGACGGTGTGTTATCTTG
ATATTAAAACTAGGAGACTTTTTCCAAGACCCTCTCCCGCCGGCAGACCT
GTACGTGGTGTGTCGAATTCTTCACGACTGGGCTGAAGACAAGATTCTCA
CACTACTGACCAAGATGCACGACAGTCTTCCTCCGGGTGGGTATAGTTCT
CACGTGCACTCAGCTACTAATCAGCTTTTTGCATCAGCTAGGTTACAACA
GACATAAATGTTACTGATGTGAGACACCTCATACACCCAAAGATATAGAT
GGTGCGCATGTGGCAGCTTAACTATGGGGGAAATGTTCTGGGAATCCTTG
TTGGAGGACTAATCTTTTTAACTTCCCGACATCGCAGAGAAATGTAAGTT
TAATGACATTTTGACCCTATAATGTGCAAGAAAATTGATAAAAAAAGGGG
CAATTGTGTGTCAAAACAATCATTTCAGCCATCCAAAAATGGTATTTCTT
GCCGAATTTGTGTATGAGCCTCCCTAGCATGATATATATGGGCGCCTCTA
CAAAAGGAAGATTCTGAGTTAAATAGAAAACGAGTTAACTGGCGATTACG
TTTGTTCGTTGGTTGGTTCGCCAGACCCTTGCAGTGACGCATAGAGGGCA
GCAAGTTTCCTTGCTATTTTAGGCTGCTACCAGTTGAGCCACAGAGACAT
ATCTTTACTGGCAAGTACAGCGTTATTTTCTTATATTCTAATTCTACAGG
AGGAGGTGTGTTGATTGTTGAACACATGCTGGACGATGACAAGACGGGAC
CAGAGGTGGCCCACAACTTCGATCTCTCCATGCTGTTGATGGGTGCTGGC
CGAGAGCGTTCTGGACGAGAGTTCAAACGACTGTTGATCATGGTCGGCTT
CAAAGAGGTCAACGTCCGGAGCAATAGTTACCCATTTGGACACGTTCTTG
CACGGAAAGCACCAAAACATTCTGACCGACTGTAATTCAACATGGATTGA
AAATGTTGGCAAAGTGCTGCCGTGGACGTAAACAAATTTCGGGTATCGAT
ACAGCTATCGGTACAGTAAGTTTGGCCAATCATTTTTAAGTTGACCAATG
TCTTTTACTATTGGTGAATGTAGCCAACTGTCTATTTCCAGTGGTGA Coding sequence (CDS) from alignment at Sc0000192:497497..502043+ >transcript:BL95880_evm0 ID=transcript:BL95880_evm0|Name=transcript:BL95880_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=855bp|location=Sequence derived from alignment at Sc0000192:497497..502043+ (Branchiostoma lanceolatum)
ATGGCGACCGTGGATCCAGATGCGGAAAACGAGGCTCGACGGATTCTTGA
CATCACTGAAGGTTTTATGAAGTCACAGATCTTATTCACCAGTTTTAAAT
TGGGAGTCTTCGACCTTCTGGACACGTCAGAGGCTCCTATGACTGCTGTG
AGGATAGCTGAAGCCATCCGAACTGACACTGACGCCACCAAGCGGCTGCT
TAACGCATGTGCAGGTCTGGGTCTGTTACAGAAGGTGAATGTGGACAAAG
AAACAGGGGACGGTTGGTACCAGCTCACTAAGGCCAGCAGGGAGTTCCTA
ACATCATCGAGCCCAACAAACATGGGAGACTCGGTCAAAATCCGGGCATC
TTTTTACCAGTCTCCATGGGGGCACCTCCAAAGAGCACTAGAGGAAGGGC
CGGCGTCCGTCCGTCGGCAAAACCAGGACAACATTGGCGATAATTTCAAG
ATCTTGTTCTCAAACAAAACCTTCATGGGTGCGATGGCGGCAATGGTGAC
TATCTTTGGTGCGAGGACCGCCTCTGCGTTCGATCTTTCGGAATTTAAGA
GAATTTGTGACATCAGAGGAGACTTTTTCCAAGACCCTCTCCCGCCGGCA
GACCTGTACGTGGTGTGTCGAATTCTTCACGACTGGGCTGAAGACAAGAT
TCTCACACTACTGACCAAGATGCACGACAGTCTTCCTCCGGGAGGAGGTG
TGTTGATTGTTGAACACATGCTGGACGATGACAAGACGGGACCAGAGGTG
GCCCACAACTTCGATCTCTCCATGCTGTTGATGGGTGCTGGCCGAGAGCG
TTCTGGACGAGAGTTCAAACGACTGTTGATCATGGTCGGCTTCAAAGAGT
GGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000192 | genome | Sc0000192:497497..502043 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95880_evm0 |
| Biotype | protein_coding |
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