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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95886_evm1 >transcript:BL95886_evm1-protein ID=transcript:BL95886_evm1-protein|Name=transcript:BL95886_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=328bp
MEGLKTALESRQVVLAAVAAAAVATAGVAYLTWRTSRRQYVPVGHVSKIY
VHPVKSCRGLEVGEAEVTKQGLRLEGVMDRHLLVLDEKDHFVTARTEPSM
ILITPRCVGDGQVRLEAPGMDPLNLPKPNTDGRVINVTIWDIEGEALDCG
PEAADWLEKYFGKPGFKLVMSAPGLKKRCPVNHTRYKGIATDKDKVGFQE
YVAMHLMTESSLDDLNSRLTKPVAMRVFRPNVVVSGSDPLQEDRWQHVRI
GKAEFRKMLPCNRCRITTVNPETGVKEGQEPLSTLRSYRLPEDEKQKRLF
GQAPLLGLMCGVEQEGSIHIGDTVYACV Run BLAST on NCBI mRNA from alignment at Sc0000193:330216..332586+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95886_evm1 ID=transcript:BL95886_evm1|Name=transcript:BL95886_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2371bp|location=Sequence derived from alignment at Sc0000193:330216..332586+ (Branchiostoma lanceolatum)
ATGGAAGGTCTGAAGACTGCTTTGGAGTCGAGACAAGTAGTTCTTGCTGC
TGTGGCCGCCGCAGCGGTCGCCACTGCAGGAGTAGCGTACTTGACGTGGC
GGACGTCCCGAAGGCAGTACGTCCCGGTCGGCCATGTCTCCAAAATCTAC
GTGCACCCGGTAAAGTCGTGCCGGGGTCTGGAGGTGGGGGAGGCCGAGGT
GACTAAACAAGGTCTCCGACTGGAGGGGGTCATGGACAGGTAGGGACCGT
TCAATGAATGTAGGGACGATCCTATTCTCCAAGCAGATGTTTCGGTCGGG
GGCGGGGCTAGTAGTGGCCTCATGTGGAGGGAAGGCCACTACTAGCGAAA
CCTCTGCTTGGAGAATAGGACCATCCTCCCGATCTATGACTAGGGGGCGT
ATAGACTGTCATGGTAATACCTTGATACCCTTACCTACTTTAATACCTAC
TAGAATTCATACTAGCCTTTCAAAAAATAATGAATTAAAAACATTTGTAT
GAAGTACGAAACCGTTTCATATTTCATACAAATGTTTTTAATTTGTTGTA
TTATTTTCAATATCTCAACCACACATACAAGATATGCTAGTCACCAGTTG
CCCTCTAGAGTCTAGAGTCTGGCTTTGGAGACAGGTATTTGACATTGGTT
TTATTATCCATTTCATATACACATATGGACAGATACAGTTCCTGGTGGTG
AATCTTCATCTGTCATCTTACCGTTCTATACAGTTCTCCATGACAGACAC
TTGTTTGTCCACTAGACACCTGTTGGTGCTGGATGAGAAGGACCACTTCG
TGACCGCGCGGACAGAGCCAAGTATGATCCTCATCACCCCCAGGTGTGTT
GGAGACGGACAGGTGAGACTGGAGGCACCTGGTATGGACCCGCTCAATCT
GCCCAAACCCAACACAGATGGCAGGGTGATCAACGTCACGTAAGAAATGA
CATTGTTCTAACGTAAGTTTGCTTTCTTTAAATTTGTCGTTGATGTCAAC
TCTTCTTCAGATGTTGAATGTGTAAACTCCTTGGTTACGTTAGGATATGG
GACATAGAGGGAGAGGCGCTGGACTGTGGGCCCGAGGCTGCCGACTGGCT
GGAGAAGTACTTTGGAAAACCGGGCTTCAAACTGGTCATGTCGGCACCGG
GCCTTAAAAAGCGCTGTCCCGTCAACCACACGAGGTATAAGGGCATCGCC
ACGGATAAAGACAAGGTTGGTTTATGTTATTCCACTTGGGTGATACTAAG
TTGTGATTTGGTGCATTCTTAGCGGCCCTCATGATAGCTGTAAAGAGTTA
AATGTGGAACTAGGGTTTTGCTTCGGTGCCGTTCCAGGTGGGGTTCCAGG
AATATGTAGCCATGCACCTGATGACAGAATCCTCCCTGGACGACCTGAAC
AGCAGACTGACCAAACCTGTGGCCATGCGCGTCTTCAGACCTAACGTGGT
GGTGTCTGGGAGTGACCCACTCCAGGAGGTAGGTGGGGCCATGTTCTCGA
AGAAACGGGACACCTGAGATGATGATAATGATGACATAATGACATAATGT
CAACTGACACAAGTAGTAATTCATCAGGTAGTTGTGACCCCGTTTCACAA
AAAAAGGAAAAACTTATTGAATGCAGATTGTTTCGTCCCTCAGTGTGCAA
TGTTTCTCCTTCATGTTCGCAGTGACCACTTCAGAATCTTATTGTTTGGT
TCCAGGACCGTTGGCAGCATGTGCGCATCGGTAAGGCAGAGTTCCGGAAA
ATGCTTCCCTGCAACAGGTGAGGTATAATGGCATAAAATCTACTGCAAAC
ATTTTGTAAACCTTTGCAAAAACACATGAAAATAGTTGTAGTAAAAATAC
AGAAATCGCCCAGTATTGATACATTTATCTTGCTGTCGTGTCAGGCCTTC
AATATCTAATGGCAGATTCACTTTTCTCCATTGGATATAATTCTGTCAAA
TGTGTTCAGTTTATCGCGAATACCATCTTTTTTAACTGTCCAGGCCTAAT
TGCCTCTGTCCCTCGTTTCCAGGTGCCGCATAACTACTGTCAACCCAGAG
ACTGGTGTGAAGGAAGGACAGGAACCCCTCTCTACACTTAGAAGGTCTGT
AAATCTCGAATACTTTTTGGTTGTGTTTGGCAGTAAAGTTTGGCCAATAT
GAAGTTCGCCCACTCATCTTATGGACCAGATGCGTTCCCTTTTGGGATAC
TGTAACACGTCAAACATATTCATATTTTGTATTTTTTGTTGCAGCTACCG
TCTTCCTGAGGACGAGAAGCAGAAGAGACTGTTCGGACAAGCCCCACTGT
TAGGCCTCATGTGTGGGGTGGAGCAGGAGGGGTCCATCCACATAGGAGAT
ACAGTGTACGCCTGCGTCTAG Coding sequence (CDS) from alignment at Sc0000193:330216..332586+ >transcript:BL95886_evm1 ID=transcript:BL95886_evm1|Name=transcript:BL95886_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=6909bp|location=Sequence derived from alignment at Sc0000193:330216..332586+ (Branchiostoma lanceolatum)
ATGGAAGGTCTGAAGACTGCTTTGGAGTCGAGACAAGTAGTTCTTGCTGC
TGTGGCCGCCGCAGCGGTCGCCACTGCAGGAGTAGCGTACTTGACGTGGC
GGACGTCCCGAAGGCAGTACGTCCCGGTCGGCCATGTCTCCAAAATCTAC
GTGCACCCGGTAAAGTCGTGCCGGGGTCTGGAGGTGGGGGAGGCCGAGGT
GACTAAACAAGGTCTCCGACTGGAGGGGGTCATGGACAGACACCTGTTGG
TGCTGGATGAGAAGGACCACTTCGTGACCGCGCGGACAGAGCCAAGTATG
ATCCTCATCACCCCCAGGTGTGTTGGAGACGGACAGGTGAGACTGGAGGC
ACCTGGTATGGACCCGCTCAATCTGCCCAAACCCAACACAGATGGCAGGG
TGATCAACGTCACGATATGGGACATAGAGGGAGAGGCGCTGGACTGTGGG
CCCGAGGCTGCCGACTGGCTGGAGAAGTACTTTGGAAAACCGGGCTTCAA
ACTGGTCATGTCGGCACCGGGCCTTAAAAAGCGCTGTCCCGTCAACCACA
CGAGGTATAAGGGCATCGCCACGGATAAAGACAAGGTGGGGTTCCAGGAA
TATGTAGCCATGCACCTGATGACAGAATCCTCCCTGGACGACCTGAACAG
CAGACTGACCAAACCTGTGGCCATGCGCGTCTTCAGACCTAACGTGGTGG
TGTCTGGGAGTGACCCACTCCAGGAGGACCGTTGGCAGCATGTGCGCATC
GGTAAGGCAGAGTTCCGGAAAATGCTTCCCTGCAACAGGTGCCGCATAAC
TACTGTCAACCCAGAGACTGGTGTGAAGGAAGGACAGGAACCCCTCTCTA
CACTTAGAAGCTACCGTCTTCCTGAGGACGAGAAGCAGAAGAGACTGTTC
GGACAAGCCCCACTGTTAGGCCTCATGTGTGGGGTGGAGCAGGAGGGGTC
CATCCACATAGGAGATACAGTGTACGCCTGCGTCTAGATGGAAGGTCTGA
AGACTGCTTTGGAGTCGAGACAAGTAGTTCTTGCTGCTGTGGCCGCCGCA
GCGGTCGCCACTGCAGGAGTAGCGTACTTGACGTGGCGGACGTCCCGAAG
GCAGTACGTCCCGGTCGGCCATGTCTCCAAAATCTACGTGCACCCGGTAA
AGTCGTGCCGGGGTCTGGAGGTGGGGGAGGCCGAGGTGACTAAACAAGGT
CTCCGACTGGAGGGGGTCATGGACAGACACCTGTTGGTGCTGGATGAGAA
GGACCACTTCGTGACCGCGCGGACAGAGCCAAGTATGATCCTCATCACCC
CCAGGTGTGTTGGAGACGGACAGGTGAGACTGGAGGCACCTGGTATGGAC
CCGCTCAATCTGCCCAAACCCAACACAGATGGCAGGGTGATCAACGTCAC
GATATGGGACATAGAGGGAGAGGCGCTGGACTGTGGGCCCGAGGCTGCCG
ACTGGCTGGAGAAGTACTTTGGAAAACCGGGCTTCAAACTGGTCATGTCG
GCACCGGGCCTTAAAAAGCGCTGTCCCGTCAACCACACGAGGTATAAGGG
CATCGCCACGGATAAAGACAAGGTGGGGTTCCAGGAATATGTAGCCATGC
ACCTGATGACAGAATCCTCCCTGGACGACCTGAACAGCAGACTGACCAAA
CCTGTGGCCATGCGCGTCTTCAGACCTAACGTGGTGGTGTCTGGGAGTGA
CCCACTCCAGGAGGACCGTTGGCAGCATGTGCGCATCGGTAAGGCAGAGT
TCCGGAAAATGCTTCCCTGCAACAGGTGCCGCATAACTACTGTCAACCCA
GAGACTGGTGTGAAGGAAGGACAGGAACCCCTCTCTACACTTAGAAGCTA
CCGTCTTCCTGAGGACGAGAAGCAGAAGAGACTGTTCGGACAAGCCCCAC
TGTTAGGCCTCATGTGTGGGGTGGAGCAGGAGGGGTCCATCCACATAGGA
GATACAGTGTACGCCTGCGTCTAGATGGAAGGTCTGAAGACTGCTTTGGA
GTCGAGACAAGTAGTTCTTGCTGCTGTGGCCGCCGCAGCGGTCGCCACTG
CAGGAGTAGCGTACTTGACGTGGCGGACGTCCCGAAGGCAGTACGTCCCG
GTCGGCCATGTCTCCAAAATCTACGTGCACCCGGTAAAGTCGTGCCGGGG
TCTGGAGGTGGGGGAGGCCGAGGTGACTAAACAAGGTCTCCGACTGGAGG
GGGTCATGGACAGACACCTGTTGGTGCTGGATGAGAAGGACCACTTCGTG
ACCGCGCGGACAGAGCCAAGTATGATCCTCATCACCCCCAGGTGTGTTGG
AGACGGACAGGTGAGACTGGAGGCACCTGGTATGGACCCGCTCAATCTGC
CCAAACCCAACACAGATGGCAGGGTGATCAACGTCACGATATGGGACATA
GAGGGAGAGGCGCTGGACTGTGGGCCCGAGGCTGCCGACTGGCTGGAGAA
GTACTTTGGAAAACCGGGCTTCAAACTGGTCATGTCGGCACCGGGCCTTA
AAAAGCGCTGTCCCGTCAACCACACGAGGTATAAGGGCATCGCCACGGAT
AAAGACAAGGTGGGGTTCCAGGAATATGTAGCCATGCACCTGATGACAGA
ATCCTCCCTGGACGACCTGAACAGCAGACTGACCAAACCTGTGGCCATGC
GCGTCTTCAGACCTAACGTGGTGGTGTCTGGGAGTGACCCACTCCAGGAG
GACCGTTGGCAGCATGTGCGCATCGGTAAGGCAGAGTTCCGGAAAATGCT
TCCCTGCAACAGGTGCCGCATAACTACTGTCAACCCAGAGACTGGTGTGA
AGGAAGGACAGGAACCCCTCTCTACACTTAGAAGCTACCGTCTTCCTGAG
GACGAGAAGCAGAAGAGACTGTTCGGACAAGCCCCACTGTTAGGCCTCAT
GTGTGGGGTGGAGCAGGAGGGGTCCATCCACATAGGAGATACAGTGTACG
CCTGCGTCTAGATGGAAGGTCTGAAGACTGCTTTGGAGTCGAGACAAGTA
GTTCTTGCTGCTGTGGCCGCCGCAGCGGTCGCCACTGCAGGAGTAGCGTA
CTTGACGTGGCGGACGTCCCGAAGGCAGTACGTCCCGGTCGGCCATGTCT
CCAAAATCTACGTGCACCCGGTAAAGTCGTGCCGGGGTCTGGAGGTGGGG
GAGGCCGAGGTGACTAAACAAGGTCTCCGACTGGAGGGGGTCATGGACAG
ACACCTGTTGGTGCTGGATGAGAAGGACCACTTCGTGACCGCGCGGACAG
AGCCAAGTATGATCCTCATCACCCCCAGGTGTGTTGGAGACGGACAGGTG
AGACTGGAGGCACCTGGTATGGACCCGCTCAATCTGCCCAAACCCAACAC
AGATGGCAGGGTGATCAACGTCACGATATGGGACATAGAGGGAGAGGCGC
TGGACTGTGGGCCCGAGGCTGCCGACTGGCTGGAGAAGTACTTTGGAAAA
CCGGGCTTCAAACTGGTCATGTCGGCACCGGGCCTTAAAAAGCGCTGTCC
CGTCAACCACACGAGGTATAAGGGCATCGCCACGGATAAAGACAAGGTGG
GGTTCCAGGAATATGTAGCCATGCACCTGATGACAGAATCCTCCCTGGAC
GACCTGAACAGCAGACTGACCAAACCTGTGGCCATGCGCGTCTTCAGACC
TAACGTGGTGGTGTCTGGGAGTGACCCACTCCAGGAGGACCGTTGGCAGC
ATGTGCGCATCGGTAAGGCAGAGTTCCGGAAAATGCTTCCCTGCAACAGG
TGCCGCATAACTACTGTCAACCCAGAGACTGGTGTGAAGGAAGGACAGGA
ACCCCTCTCTACACTTAGAAGCTACCGTCTTCCTGAGGACGAGAAGCAGA
AGAGACTGTTCGGACAAGCCCCACTGTTAGGCCTCATGTGTGGGGTGGAG
CAGGAGGGGTCCATCCACATAGGAGATACAGTGTACGCCTGCGTCTAGAT
GGAAGGTCTGAAGACTGCTTTGGAGTCGAGACAAGTAGTTCTTGCTGCTG
TGGCCGCCGCAGCGGTCGCCACTGCAGGAGTAGCGTACTTGACGTGGCGG
ACGTCCCGAAGGCAGTACGTCCCGGTCGGCCATGTCTCCAAAATCTACGT
GCACCCGGTAAAGTCGTGCCGGGGTCTGGAGGTGGGGGAGGCCGAGGTGA
CTAAACAAGGTCTCCGACTGGAGGGGGTCATGGACAGACACCTGTTGGTG
CTGGATGAGAAGGACCACTTCGTGACCGCGCGGACAGAGCCAAGTATGAT
CCTCATCACCCCCAGGTGTGTTGGAGACGGACAGGTGAGACTGGAGGCAC
CTGGTATGGACCCGCTCAATCTGCCCAAACCCAACACAGATGGCAGGGTG
ATCAACGTCACGATATGGGACATAGAGGGAGAGGCGCTGGACTGTGGGCC
CGAGGCTGCCGACTGGCTGGAGAAGTACTTTGGAAAACCGGGCTTCAAAC
TGGTCATGTCGGCACCGGGCCTTAAAAAGCGCTGTCCCGTCAACCACACG
AGGTATAAGGGCATCGCCACGGATAAAGACAAGGTGGGGTTCCAGGAATA
TGTAGCCATGCACCTGATGACAGAATCCTCCCTGGACGACCTGAACAGCA
GACTGACCAAACCTGTGGCCATGCGCGTCTTCAGACCTAACGTGGTGGTG
TCTGGGAGTGACCCACTCCAGGAGGACCGTTGGCAGCATGTGCGCATCGG
TAAGGCAGAGTTCCGGAAAATGCTTCCCTGCAACAGGTGCCGCATAACTA
CTGTCAACCCAGAGACTGGTGTGAAGGAAGGACAGGAACCCCTCTCTACA
CTTAGAAGCTACCGTCTTCCTGAGGACGAGAAGCAGAAGAGACTGTTCGG
ACAAGCCCCACTGTTAGGCCTCATGTGTGGGGTGGAGCAGGAGGGGTCCA
TCCACATAGGAGATACAGTGTACGCCTGCGTCTAGATGGAAGGTCTGAAG
ACTGCTTTGGAGTCGAGACAAGTAGTTCTTGCTGCTGTGGCCGCCGCAGC
GGTCGCCACTGCAGGAGTAGCGTACTTGACGTGGCGGACGTCCCGAAGGC
AGTACGTCCCGGTCGGCCATGTCTCCAAAATCTACGTGCACCCGGTAAAG
TCGTGCCGGGGTCTGGAGGTGGGGGAGGCCGAGGTGACTAAACAAGGTCT
CCGACTGGAGGGGGTCATGGACAGACACCTGTTGGTGCTGGATGAGAAGG
ACCACTTCGTGACCGCGCGGACAGAGCCAAGTATGATCCTCATCACCCCC
AGGTGTGTTGGAGACGGACAGGTGAGACTGGAGGCACCTGGTATGGACCC
GCTCAATCTGCCCAAACCCAACACAGATGGCAGGGTGATCAACGTCACGA
TATGGGACATAGAGGGAGAGGCGCTGGACTGTGGGCCCGAGGCTGCCGAC
TGGCTGGAGAAGTACTTTGGAAAACCGGGCTTCAAACTGGTCATGTCGGC
ACCGGGCCTTAAAAAGCGCTGTCCCGTCAACCACACGAGGTATAAGGGCA
TCGCCACGGATAAAGACAAGGTGGGGTTCCAGGAATATGTAGCCATGCAC
CTGATGACAGAATCCTCCCTGGACGACCTGAACAGCAGACTGACCAAACC
TGTGGCCATGCGCGTCTTCAGACCTAACGTGGTGGTGTCTGGGAGTGACC
CACTCCAGGAGGACCGTTGGCAGCATGTGCGCATCGGTAAGGCAGAGTTC
CGGAAAATGCTTCCCTGCAACAGGTGCCGCATAACTACTGTCAACCCAGA
GACTGGTGTGAAGGAAGGACAGGAACCCCTCTCTACACTTAGAAGCTACC
GTCTTCCTGAGGACGAGAAGCAGAAGAGACTGTTCGGACAAGCCCCACTG
TTAGGCCTCATGTGTGGGGTGGAGCAGGAGGGGTCCATCCACATAGGAGA
TACAGTGTACGCCTGCGTCTAGATGGAAGGTCTGAAGACTGCTTTGGAGT
CGAGACAAGTAGTTCTTGCTGCTGTGGCCGCCGCAGCGGTCGCCACTGCA
GGAGTAGCGTACTTGACGTGGCGGACGTCCCGAAGGCAGTACGTCCCGGT
CGGCCATGTCTCCAAAATCTACGTGCACCCGGTAAAGTCGTGCCGGGGTC
TGGAGGTGGGGGAGGCCGAGGTGACTAAACAAGGTCTCCGACTGGAGGGG
GTCATGGACAGACACCTGTTGGTGCTGGATGAGAAGGACCACTTCGTGAC
CGCGCGGACAGAGCCAAGTATGATCCTCATCACCCCCAGGTGTGTTGGAG
ACGGACAGGTGAGACTGGAGGCACCTGGTATGGACCCGCTCAATCTGCCC
AAACCCAACACAGATGGCAGGGTGATCAACGTCACGATATGGGACATAGA
GGGAGAGGCGCTGGACTGTGGGCCCGAGGCTGCCGACTGGCTGGAGAAGT
ACTTTGGAAAACCGGGCTTCAAACTGGTCATGTCGGCACCGGGCCTTAAA
AAGCGCTGTCCCGTCAACCACACGAGGTATAAGGGCATCGCCACGGATAA
AGACAAGGTGGGGTTCCAGGAATATGTAGCCATGCACCTGATGACAGAAT
CCTCCCTGGACGACCTGAACAGCAGACTGACCAAACCTGTGGCCATGCGC
GTCTTCAGACCTAACGTGGTGGTGTCTGGGAGTGACCCACTCCAGGAGGA
CCGTTGGCAGCATGTGCGCATCGGTAAGGCAGAGTTCCGGAAAATGCTTC
CCTGCAACAGGTGCCGCATAACTACTGTCAACCCAGAGACTGGTGTGAAG
GAAGGACAGGAACCCCTCTCTACACTTAGAAGCTACCGTCTTCCTGAGGA
CGAGAAGCAGAAGAGACTGTTCGGACAAGCCCCACTGTTAGGCCTCATGT
GTGGGGTGGAGCAGGAGGGGTCCATCCACATAGGAGATACAGTGTACGCC
TGCGTCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000193 | genome | Sc0000193:330216..332586 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95886_evm1 |
| Biotype | protein_coding |
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