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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95888_evm0 >transcript:BL95888_evm0-protein ID=transcript:BL95888_evm0-protein|Name=transcript:BL95888_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=329bp
MDDMKATLQSRQVVVAAVATAAVVGAGIAYMRWRRPRREYVPVGRVSKIY
VHPVKACRGLEVGEAQVTKLGVRSGGVLDRDLIILDETGRFVTARTEPRI
VLISPQCAGDGQVRLEAPGMDPYTVPKPDVSGEVMEISMKDGMIGHALDC
GPLAGLWLDKFFGKQGYSMVMAKPGGQKRHPANSRRYKDVARADDKVGFQ
DYTPLNMASATSLEDLNSRLPSPVDMRVFRPNIVVHGSNPYQEDDWNYIR
IGQAELRRMLPCNRCKVTMVDPETAAKDEEEPLNTLRSYRLPKEEMHKAL
FGQSPLFGVTLGVEHEGVINVGDTIYACG Run BLAST on NCBI mRNA from alignment at Sc0000193:326802..329187+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95888_evm0 ID=transcript:BL95888_evm0|Name=transcript:BL95888_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=2386bp|location=Sequence derived from alignment at Sc0000193:326802..329187+ (Branchiostoma lanceolatum)
ATGGACGACATGAAGGCTACCTTACAGTCGAGACAAGTTGTGGTGGCTGC
CGTGGCCACAGCGGCTGTAGTGGGGGCCGGGATAGCCTACATGAGGTGGC
GGAGGCCGCGCCGAGAGTACGTCCCAGTCGGCCGTGTCTCCAAAATCTAC
GTCCACCCGGTTAAAGCGTGCCGGGGCCTGGAGGTGGGGGAGGCCCAGGT
GACCAAACTCGGCGTCCGGTCTGGAGGAGTCCTGGACAGGTACGGACCAC
CAGGGGAATGGGTGTACGGTATATGGGTAAGATTAGACGCTATCGTCTCG
GATATTCATGCTGTGGTCTGTGTGTTATGGACGATACCTTATCTGTGCAG
TACACATACCTTATCTATTCAACCGATCGCAAGCGGATATAGCATAAGTA
TCGTCACAGACCACGCAAAGGCCAGAGCTTCAACCAACTCAAGTCACAGA
TTATATACTTTAACGTTACAATGGAAAATACCATTCTTCAATTGAATCAT
TGACGTTATATCTACCTCCATGTATCACTTCTCAGCTAACCACCTGTATG
ATTATTGGCCTTTGACCTTCCGGTACACCGGCTGTTTTGTTTTCCAGAGA
CCTGATCATCCTTGACGAGACGGGCAGGTTTGTGACGGCTCGTACTGAAC
CCCGTATCGTCCTGATCTCACCGCAGTGTGCTGGCGACGGACAGGTCCGG
CTGGAGGCACCTGGTATGGACCCGTACACTGTACCCAAACCTGACGTCAG
CGGGGAAGTCATGGAGATCAGGTGAGGTCCGCCAGGCCACCGTTCTGTTA
TCAAGAGAACATATTTAAGATTCTCTTGAATGTATAATGTATAAAGAATG
TATAAAGACGAAAATGACGAATATGAATGTCTTTTCAAATGGAAATACAC
AAACTGATCATAACGCACTGTCAATTGTAACATTAGAAAACCGGGTTCTG
TTAAATCTGAAAAGGCTACTTTATTGTCCCTGTGTAGTATGAAAGACGGC
ATGATCGGACATGCTCTGGACTGTGGTCCCCTGGCTGGGCTGTGGCTGGA
CAAGTTCTTTGGAAAACAGGGCTACAGCATGGTCATGGCCAAGCCTGGTG
GTCAGAAGAGACACCCCGCCAACAGCAGGAGGTACAAGGACGTGGCCAGA
GCTGATGACAAGGTTTGTCCCTCAGCGCTCTTTCTCTAAACTGATTATTA
CAGATTGCTGCTGTAGTGGTAAACAAACATCTTTACGAACTATCGAAAAT
CATTATCAGGTAACCTACATTCAATCTTATTACACAGAAATGTTCTGAAC
AAAAGTCATGAACCAACTTGCTGCTGTGGTGGTGATTTTCCAGGTGGGAT
TCCAGGACTACACTCCCTTGAACATGGCATCGGCAACTTCCCTGGAGGAC
CTGAATAGCCGTCTGCCCAGTCCTGTGGACATGCGCGTCTTCAGACCCAA
CATAGTGGTGCATGGGAGTAACCCCTACCAGGAGGTGGGTTGGGAACTGG
GAACCATAAAAGCATAATTTTTTAAACATATAAGTCTGAGTTTCTTTGTG
TTCGACGATTGTGAGAAAGAACCAAACTACATGTAGATACAATGGATGTT
TGTGTTTGTGTTTGCAGGACGACTGGAACTACATCCGTATCGGACAGGCG
GAGCTGAGGAGAATGCTGCCCTGTAACAGGTGGGCACTGTTTGTACTGTA
TGACGTGTACAAAGTCACTAGACTAAAGTAAGCATGTCTCTCTGACTCTC
AGCAAAATAAAAACTGGCAATGATATGATACAGTGGTGAGAATCATCCAA
TCAAAACATATACCCATTCGTCTGATGTTACATAGCCCTGTCTTTTTAAG
CTCCCTATACCCTATTCACTTCTTGTTTAAGGTGTAAAGTTACCATGGTC
GATCCTGAAACTGCAGCAAAGGATGAAGAGGAGCCATTGAACACCCTGAG
AAGGTTCGACATTTGTCATATATACAGGCCTAACATATGTACACAGTGCG
TCATGTTCATACCCCGGTTTGTATTTCATAGATGTAGCGTCCGGGAATTT
GTCCACTGTCATGGAGACAGACCTAAGTAAAGTAACATGAAGATACTGAC
TTCAAAAGCAGATCTTTTGAATGACATATTTATCTGATGACTGGTAGTGC
TGTTGTGGCATCCCTGTGTGTAAACCTAATGTTTTCAAAGTGATATGTTT
CTGGATTTGTGCCAAATGACAAAAATGGTAAAATGTTGTCTTTGTGGTTT
CATTCCCAGCTATCGTCTCCCCAAGGAGGAAATGCACAAGGCGCTATTTG
GACAGAGTCCTCTTTTTGGCGTCACCCTAGGAGTGGAGCATGAAGGAGTC
ATAAATGTCGGAGATACAATTTATGCCTGTGGATAG Coding sequence (CDS) from alignment at Sc0000193:326802..329187+ >transcript:BL95888_evm0 ID=transcript:BL95888_evm0|Name=transcript:BL95888_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=6930bp|location=Sequence derived from alignment at Sc0000193:326802..329187+ (Branchiostoma lanceolatum)
ATGGACGACATGAAGGCTACCTTACAGTCGAGACAAGTTGTGGTGGCTGC
CGTGGCCACAGCGGCTGTAGTGGGGGCCGGGATAGCCTACATGAGGTGGC
GGAGGCCGCGCCGAGAGTACGTCCCAGTCGGCCGTGTCTCCAAAATCTAC
GTCCACCCGGTTAAAGCGTGCCGGGGCCTGGAGGTGGGGGAGGCCCAGGT
GACCAAACTCGGCGTCCGGTCTGGAGGAGTCCTGGACAGAGACCTGATCA
TCCTTGACGAGACGGGCAGGTTTGTGACGGCTCGTACTGAACCCCGTATC
GTCCTGATCTCACCGCAGTGTGCTGGCGACGGACAGGTCCGGCTGGAGGC
ACCTGGTATGGACCCGTACACTGTACCCAAACCTGACGTCAGCGGGGAAG
TCATGGAGATCAGTATGAAAGACGGCATGATCGGACATGCTCTGGACTGT
GGTCCCCTGGCTGGGCTGTGGCTGGACAAGTTCTTTGGAAAACAGGGCTA
CAGCATGGTCATGGCCAAGCCTGGTGGTCAGAAGAGACACCCCGCCAACA
GCAGGAGGTACAAGGACGTGGCCAGAGCTGATGACAAGGTGGGATTCCAG
GACTACACTCCCTTGAACATGGCATCGGCAACTTCCCTGGAGGACCTGAA
TAGCCGTCTGCCCAGTCCTGTGGACATGCGCGTCTTCAGACCCAACATAG
TGGTGCATGGGAGTAACCCCTACCAGGAGGACGACTGGAACTACATCCGT
ATCGGACAGGCGGAGCTGAGGAGAATGCTGCCCTGTAACAGGTGTAAAGT
TACCATGGTCGATCCTGAAACTGCAGCAAAGGATGAAGAGGAGCCATTGA
ACACCCTGAGAAGCTATCGTCTCCCCAAGGAGGAAATGCACAAGGCGCTA
TTTGGACAGAGTCCTCTTTTTGGCGTCACCCTAGGAGTGGAGCATGAAGG
AGTCATAAATGTCGGAGATACAATTTATGCCTGTGGATAGATGGACGACA
TGAAGGCTACCTTACAGTCGAGACAAGTTGTGGTGGCTGCCGTGGCCACA
GCGGCTGTAGTGGGGGCCGGGATAGCCTACATGAGGTGGCGGAGGCCGCG
CCGAGAGTACGTCCCAGTCGGCCGTGTCTCCAAAATCTACGTCCACCCGG
TTAAAGCGTGCCGGGGCCTGGAGGTGGGGGAGGCCCAGGTGACCAAACTC
GGCGTCCGGTCTGGAGGAGTCCTGGACAGAGACCTGATCATCCTTGACGA
GACGGGCAGGTTTGTGACGGCTCGTACTGAACCCCGTATCGTCCTGATCT
CACCGCAGTGTGCTGGCGACGGACAGGTCCGGCTGGAGGCACCTGGTATG
GACCCGTACACTGTACCCAAACCTGACGTCAGCGGGGAAGTCATGGAGAT
CAGTATGAAAGACGGCATGATCGGACATGCTCTGGACTGTGGTCCCCTGG
CTGGGCTGTGGCTGGACAAGTTCTTTGGAAAACAGGGCTACAGCATGGTC
ATGGCCAAGCCTGGTGGTCAGAAGAGACACCCCGCCAACAGCAGGAGGTA
CAAGGACGTGGCCAGAGCTGATGACAAGGTGGGATTCCAGGACTACACTC
CCTTGAACATGGCATCGGCAACTTCCCTGGAGGACCTGAATAGCCGTCTG
CCCAGTCCTGTGGACATGCGCGTCTTCAGACCCAACATAGTGGTGCATGG
GAGTAACCCCTACCAGGAGGACGACTGGAACTACATCCGTATCGGACAGG
CGGAGCTGAGGAGAATGCTGCCCTGTAACAGGTGTAAAGTTACCATGGTC
GATCCTGAAACTGCAGCAAAGGATGAAGAGGAGCCATTGAACACCCTGAG
AAGCTATCGTCTCCCCAAGGAGGAAATGCACAAGGCGCTATTTGGACAGA
GTCCTCTTTTTGGCGTCACCCTAGGAGTGGAGCATGAAGGAGTCATAAAT
GTCGGAGATACAATTTATGCCTGTGGATAGATGGACGACATGAAGGCTAC
CTTACAGTCGAGACAAGTTGTGGTGGCTGCCGTGGCCACAGCGGCTGTAG
TGGGGGCCGGGATAGCCTACATGAGGTGGCGGAGGCCGCGCCGAGAGTAC
GTCCCAGTCGGCCGTGTCTCCAAAATCTACGTCCACCCGGTTAAAGCGTG
CCGGGGCCTGGAGGTGGGGGAGGCCCAGGTGACCAAACTCGGCGTCCGGT
CTGGAGGAGTCCTGGACAGAGACCTGATCATCCTTGACGAGACGGGCAGG
TTTGTGACGGCTCGTACTGAACCCCGTATCGTCCTGATCTCACCGCAGTG
TGCTGGCGACGGACAGGTCCGGCTGGAGGCACCTGGTATGGACCCGTACA
CTGTACCCAAACCTGACGTCAGCGGGGAAGTCATGGAGATCAGTATGAAA
GACGGCATGATCGGACATGCTCTGGACTGTGGTCCCCTGGCTGGGCTGTG
GCTGGACAAGTTCTTTGGAAAACAGGGCTACAGCATGGTCATGGCCAAGC
CTGGTGGTCAGAAGAGACACCCCGCCAACAGCAGGAGGTACAAGGACGTG
GCCAGAGCTGATGACAAGGTGGGATTCCAGGACTACACTCCCTTGAACAT
GGCATCGGCAACTTCCCTGGAGGACCTGAATAGCCGTCTGCCCAGTCCTG
TGGACATGCGCGTCTTCAGACCCAACATAGTGGTGCATGGGAGTAACCCC
TACCAGGAGGACGACTGGAACTACATCCGTATCGGACAGGCGGAGCTGAG
GAGAATGCTGCCCTGTAACAGGTGTAAAGTTACCATGGTCGATCCTGAAA
CTGCAGCAAAGGATGAAGAGGAGCCATTGAACACCCTGAGAAGCTATCGT
CTCCCCAAGGAGGAAATGCACAAGGCGCTATTTGGACAGAGTCCTCTTTT
TGGCGTCACCCTAGGAGTGGAGCATGAAGGAGTCATAAATGTCGGAGATA
CAATTTATGCCTGTGGATAGATGGACGACATGAAGGCTACCTTACAGTCG
AGACAAGTTGTGGTGGCTGCCGTGGCCACAGCGGCTGTAGTGGGGGCCGG
GATAGCCTACATGAGGTGGCGGAGGCCGCGCCGAGAGTACGTCCCAGTCG
GCCGTGTCTCCAAAATCTACGTCCACCCGGTTAAAGCGTGCCGGGGCCTG
GAGGTGGGGGAGGCCCAGGTGACCAAACTCGGCGTCCGGTCTGGAGGAGT
CCTGGACAGAGACCTGATCATCCTTGACGAGACGGGCAGGTTTGTGACGG
CTCGTACTGAACCCCGTATCGTCCTGATCTCACCGCAGTGTGCTGGCGAC
GGACAGGTCCGGCTGGAGGCACCTGGTATGGACCCGTACACTGTACCCAA
ACCTGACGTCAGCGGGGAAGTCATGGAGATCAGTATGAAAGACGGCATGA
TCGGACATGCTCTGGACTGTGGTCCCCTGGCTGGGCTGTGGCTGGACAAG
TTCTTTGGAAAACAGGGCTACAGCATGGTCATGGCCAAGCCTGGTGGTCA
GAAGAGACACCCCGCCAACAGCAGGAGGTACAAGGACGTGGCCAGAGCTG
ATGACAAGGTGGGATTCCAGGACTACACTCCCTTGAACATGGCATCGGCA
ACTTCCCTGGAGGACCTGAATAGCCGTCTGCCCAGTCCTGTGGACATGCG
CGTCTTCAGACCCAACATAGTGGTGCATGGGAGTAACCCCTACCAGGAGG
ACGACTGGAACTACATCCGTATCGGACAGGCGGAGCTGAGGAGAATGCTG
CCCTGTAACAGGTGTAAAGTTACCATGGTCGATCCTGAAACTGCAGCAAA
GGATGAAGAGGAGCCATTGAACACCCTGAGAAGCTATCGTCTCCCCAAGG
AGGAAATGCACAAGGCGCTATTTGGACAGAGTCCTCTTTTTGGCGTCACC
CTAGGAGTGGAGCATGAAGGAGTCATAAATGTCGGAGATACAATTTATGC
CTGTGGATAGATGGACGACATGAAGGCTACCTTACAGTCGAGACAAGTTG
TGGTGGCTGCCGTGGCCACAGCGGCTGTAGTGGGGGCCGGGATAGCCTAC
ATGAGGTGGCGGAGGCCGCGCCGAGAGTACGTCCCAGTCGGCCGTGTCTC
CAAAATCTACGTCCACCCGGTTAAAGCGTGCCGGGGCCTGGAGGTGGGGG
AGGCCCAGGTGACCAAACTCGGCGTCCGGTCTGGAGGAGTCCTGGACAGA
GACCTGATCATCCTTGACGAGACGGGCAGGTTTGTGACGGCTCGTACTGA
ACCCCGTATCGTCCTGATCTCACCGCAGTGTGCTGGCGACGGACAGGTCC
GGCTGGAGGCACCTGGTATGGACCCGTACACTGTACCCAAACCTGACGTC
AGCGGGGAAGTCATGGAGATCAGTATGAAAGACGGCATGATCGGACATGC
TCTGGACTGTGGTCCCCTGGCTGGGCTGTGGCTGGACAAGTTCTTTGGAA
AACAGGGCTACAGCATGGTCATGGCCAAGCCTGGTGGTCAGAAGAGACAC
CCCGCCAACAGCAGGAGGTACAAGGACGTGGCCAGAGCTGATGACAAGGT
GGGATTCCAGGACTACACTCCCTTGAACATGGCATCGGCAACTTCCCTGG
AGGACCTGAATAGCCGTCTGCCCAGTCCTGTGGACATGCGCGTCTTCAGA
CCCAACATAGTGGTGCATGGGAGTAACCCCTACCAGGAGGACGACTGGAA
CTACATCCGTATCGGACAGGCGGAGCTGAGGAGAATGCTGCCCTGTAACA
GGTGTAAAGTTACCATGGTCGATCCTGAAACTGCAGCAAAGGATGAAGAG
GAGCCATTGAACACCCTGAGAAGCTATCGTCTCCCCAAGGAGGAAATGCA
CAAGGCGCTATTTGGACAGAGTCCTCTTTTTGGCGTCACCCTAGGAGTGG
AGCATGAAGGAGTCATAAATGTCGGAGATACAATTTATGCCTGTGGATAG
ATGGACGACATGAAGGCTACCTTACAGTCGAGACAAGTTGTGGTGGCTGC
CGTGGCCACAGCGGCTGTAGTGGGGGCCGGGATAGCCTACATGAGGTGGC
GGAGGCCGCGCCGAGAGTACGTCCCAGTCGGCCGTGTCTCCAAAATCTAC
GTCCACCCGGTTAAAGCGTGCCGGGGCCTGGAGGTGGGGGAGGCCCAGGT
GACCAAACTCGGCGTCCGGTCTGGAGGAGTCCTGGACAGAGACCTGATCA
TCCTTGACGAGACGGGCAGGTTTGTGACGGCTCGTACTGAACCCCGTATC
GTCCTGATCTCACCGCAGTGTGCTGGCGACGGACAGGTCCGGCTGGAGGC
ACCTGGTATGGACCCGTACACTGTACCCAAACCTGACGTCAGCGGGGAAG
TCATGGAGATCAGTATGAAAGACGGCATGATCGGACATGCTCTGGACTGT
GGTCCCCTGGCTGGGCTGTGGCTGGACAAGTTCTTTGGAAAACAGGGCTA
CAGCATGGTCATGGCCAAGCCTGGTGGTCAGAAGAGACACCCCGCCAACA
GCAGGAGGTACAAGGACGTGGCCAGAGCTGATGACAAGGTGGGATTCCAG
GACTACACTCCCTTGAACATGGCATCGGCAACTTCCCTGGAGGACCTGAA
TAGCCGTCTGCCCAGTCCTGTGGACATGCGCGTCTTCAGACCCAACATAG
TGGTGCATGGGAGTAACCCCTACCAGGAGGACGACTGGAACTACATCCGT
ATCGGACAGGCGGAGCTGAGGAGAATGCTGCCCTGTAACAGGTGTAAAGT
TACCATGGTCGATCCTGAAACTGCAGCAAAGGATGAAGAGGAGCCATTGA
ACACCCTGAGAAGCTATCGTCTCCCCAAGGAGGAAATGCACAAGGCGCTA
TTTGGACAGAGTCCTCTTTTTGGCGTCACCCTAGGAGTGGAGCATGAAGG
AGTCATAAATGTCGGAGATACAATTTATGCCTGTGGATAGATGGACGACA
TGAAGGCTACCTTACAGTCGAGACAAGTTGTGGTGGCTGCCGTGGCCACA
GCGGCTGTAGTGGGGGCCGGGATAGCCTACATGAGGTGGCGGAGGCCGCG
CCGAGAGTACGTCCCAGTCGGCCGTGTCTCCAAAATCTACGTCCACCCGG
TTAAAGCGTGCCGGGGCCTGGAGGTGGGGGAGGCCCAGGTGACCAAACTC
GGCGTCCGGTCTGGAGGAGTCCTGGACAGAGACCTGATCATCCTTGACGA
GACGGGCAGGTTTGTGACGGCTCGTACTGAACCCCGTATCGTCCTGATCT
CACCGCAGTGTGCTGGCGACGGACAGGTCCGGCTGGAGGCACCTGGTATG
GACCCGTACACTGTACCCAAACCTGACGTCAGCGGGGAAGTCATGGAGAT
CAGTATGAAAGACGGCATGATCGGACATGCTCTGGACTGTGGTCCCCTGG
CTGGGCTGTGGCTGGACAAGTTCTTTGGAAAACAGGGCTACAGCATGGTC
ATGGCCAAGCCTGGTGGTCAGAAGAGACACCCCGCCAACAGCAGGAGGTA
CAAGGACGTGGCCAGAGCTGATGACAAGGTGGGATTCCAGGACTACACTC
CCTTGAACATGGCATCGGCAACTTCCCTGGAGGACCTGAATAGCCGTCTG
CCCAGTCCTGTGGACATGCGCGTCTTCAGACCCAACATAGTGGTGCATGG
GAGTAACCCCTACCAGGAGGACGACTGGAACTACATCCGTATCGGACAGG
CGGAGCTGAGGAGAATGCTGCCCTGTAACAGGTGTAAAGTTACCATGGTC
GATCCTGAAACTGCAGCAAAGGATGAAGAGGAGCCATTGAACACCCTGAG
AAGCTATCGTCTCCCCAAGGAGGAAATGCACAAGGCGCTATTTGGACAGA
GTCCTCTTTTTGGCGTCACCCTAGGAGTGGAGCATGAAGGAGTCATAAAT
GTCGGAGATACAATTTATGCCTGTGGATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000193 | genome | Sc0000193:326802..329187 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95888_evm0 |
| Biotype | protein_coding |
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