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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95895_evm1 >transcript:BL95895_evm1-protein ID=transcript:BL95895_evm1-protein|Name=transcript:BL95895_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=194bp
MMRVCIVTLAASHPLVADGKTVARVDFQVTEKVNRLDNKVIGKGKRGAQW
LQESSPLCRVTCTDNTEFTIYSCIKGKLVEVNENLINSPQLLTEKPSSEG
YIAIVLPKFGESDKEMARLLSQQQYQDALERREREVPSAVREREEGQSCS
KMEEQSTSSADPGKKRAGESKDAADEPQQKRAKLEVTDKEQLSS Run BLAST on NCBI mRNA from alignment at Sc0000199:185739..194262- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95895_evm1 ID=transcript:BL95895_evm1|Name=transcript:BL95895_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=8524bp|location=Sequence derived from alignment at Sc0000199:185739..194262- (Branchiostoma lanceolatum)
ATGATGAGGTACATTTGCATGTAGATGATGATTAAGATTTTTTTTATATC
TATACCTTCAGATGTGCAAGGGAGACACGGAGAGGACCTGTGCATATTGC
AGCATTCCAACAAGTAAGTGTACACACTGCCATACATGTACTAAAGATAA
CATACCTAGCATAGCCTGGTATTCTTTCATGCAAGTAAACAGGTGTAATT
TGTGGTGATACCATTTGTAGCAGCTAGGGGGCGCTGTGGTACAATTTCCA
TATTTGTTTTCCCACCACTGAAACCTTCTTACTCCATCCATCCTTTAGGT
TACTGGTATCTTTTGTCCTTAGACGAGACTTCATGCTAAGTAAATGTTTG
GTTTCACAGCCACCAAATAAGTTTATGTCACCATGACCATGAAAAATCAT
AATTTGACCACATTGAAAGCTCTTTGAAGATAGGTCCTACAGTCAAAGCT
GTCTATAATGACCACTGAAGGCATTTGAATAAAATGTTGTTTGAAAACAT
AGGATTATTAATATCTTGGTAGAAATGATTTGAAATGATTTTAAAGTACC
ACCAAAAAGTGACCACAATGCCTAAGTGGTCTTAATGTAGTCGGGTGGAC
ACCAGTACAGATTTGAATGATAGAAGAAAATAAAATCAGAAAAAGTTTGA
AAATGTGTATCACTGACTTCACCAAAAAGGTTTTCCTCTGTTTCTATATA
GGTACAACATCTAAAAAGCAGATATTTTGGAAAATGTGTTGATTTTATAA
CCTTTACTACAATTTCATACCTTGGTTACTACCCTACAACACCAGAACAT
TGTTATTTTGGTAGATATAAGATCACATAACCGTAACATAACACTTTGAG
TGAATGAAAGTTTATCACAAATTCTTGCCCGCAGGCTAATTGCAAGTACA
TGTAACATTAAAAGGATGGATAGATAACAATATAGCATGTGAACTCTAGT
TAAAGTATAGACCCTGAATTTCAACTTATTGGGTTCGACTTCTTTTTCCG
AGTGGATTTCCAAGACGAAGGATCGCACCTTTTCTGTAACGTGTGGATTT
TGTGATGCTAAGAGGGTAGTTTTTTTCTACGTTTTCTCTATAGAGGAACA
AATAGAAAGATTATTGCAAATTCCTGCCCGTAGGCTAATTGCAAGTACAT
GTACATATAGGTACGTAACACAGAGTGGACGGACAGATAATGATGAACAA
TATAACATATGACTACTCTAGTCTTAGCTACTGACACTAAGTTCTAGCTT
ATTGGGTTCGGCTTCTTTTTGCGAGACAGTGGAAGACGAATGATCCCACT
TTTTCTGTAATGTGTGGGTTTTGTGATGTTAAGAGGAGAGTAGTTTTCTT
TTCGTCTGAAAACGTGGAGAAATTAGGATGGAAAATGGTGGCGTCTTTAA
ACAGCTCATTTCTTTCGTGGTCGTAGAATGGGCAACTTGACATAAAATGT
GTTTCGTCTTCCACCTTGTTTGACATGCAGTATTCACAAATTCTTTCACA
CACAGGTAAGTTCTTGTACCGCCTAAATTAACATCCACTTGTGTCCTTTT
GTTATGAAATGCCTGTGTCCATATTGAAAGTTCACTCATGTCCCTGGTTC
TTGTAGGGTCTGTATTGTGACACTAGCGGCATCGCATCCACTGGTGGCTG
ATGGGAAGACTGTGGCCAGGGTCGACTTCCAGGTCACGGAAAAGGTCAAT
CGGCTGGACAACAAGGTCATCGGCAAGGGCAAGAGGGTAGGAACATTATC
ATAGAATATCAACACATCCAATTGTCTAAACAGATATTCTATATGATATG
TTTGATGCTGTAGTAGTAGTAGCCGGTCCACTGTGTTCTGCTGCTGCTTT
GGTCTGGAAACTCAGCAGCTTCATTCAGTCTTTCTTCAATTCTATATCGG
ATTCGATACATGTAAGCCAACATTGAACCAGTTATCAGTTATCAGTTATA
TGAATTTTACCAATGTTTTTTATATTGTTCTATTTTTGTATTGTTACATG
CAGTGGAAAGTTTATACCCCTGCACTATTATTACATGAAAAAAAAATACA
CAATTGCTGTATAAACAGTACTAGTAGATTGTTAGATACTGTTTTCTTGA
TCTCGGATTCTTTATGGGGTTGGTATTACTATTCTCTGTACACTAGCAGT
AACAATCACCTTCCAACGTTTTAGTATTCCTTCTGTAGCCTCTACCAGGG
TCCGCGGATGGCTGGAAAAAATAGTAGAAATTGGCCGAGTGAATAGGATA
TAAGGGAGTCGGTTATGGAGATAGGGACAATAGGCGACCCTCTCTTCTTA
GCCGACTCCCTTTGTATATTATTCACTCTATTTGGCCAATTTCTGCTATT
TTTCAAGCAATCCGCGGAGCCTGGTAGAGGCTAGTCCTTCTGGTATGCCT
GTCAGTTCTGCTACCTTCCACATGTATATGGTAATAATGACAATTCCACT
TCCCACAGCTAGGTGGCGCTGCAGTGAGAGCAATGCAGTTCCATACATGA
CTAAGCTTGTATCCCCCCTCTCATCACAGCTCATCACTGGAGTAGACTCT
CTGATCCATAAGTGAGAAGTAAAAAGTGGTCAAACCTGATCACTGAGGAC
GAAGCATGACGCTTTTTCCTATTCTATTAGTGCAATCCAGCTTTGATACG
GTTCGCATATTTTTGGCCAAGCACACCAGATCATCCCTACTCTTCTCGAT
AAGTGTGTTGGTTAATTCTTTTACGTGCAGAGGTTTGAAAGATTCCTCAT
ACGCGGGCCGCCGTCTTTATGTCCCCCTCTGATAGGACGATTCGATTCTT
TTCCTGTTGTGTCCAGGCCCAAATGTAGAAACAATCACTACTGCTTCGAG
GAAGCTAGCAGAAGGACCTCTGAAACGTTAGCAGGTAATTTTCAAAGACA
AAGAACCTTTATATCCACTTATCAACCAACCTGATGGAACTGTTTCTGAA
TGTGTTATAGGGTGCCCAGTGGCTGCAGGAGTCTTCCCCTCTGTGCCGAG
TGACCTGTACCGACAACACTGAGTTCACTATATACAGGTAAGGAGGTCTT
CAGTGTTGACATGATCAGATATAAATCATGGCTTGTTTAATTGAACTAAC
CCTACAATGTAGAAGGGATGGTAAAATGGGTGTCAAGATAGCAAGTTGCT
GTCCCAGAAAACAAAATATACAGACAAAAATGACATTTAGAAAACAATTA
CATTGCATGGAAGTTTTAAATTCCAAACATCTAAAATCTAAACATAGATT
TTTATTGGTTTGGATCTTGATGCACTCAACAATGATGAAAGAGCTTGTAC
CCATTAAATTAGGACTGTTTAATTTTTTTATTGTTATATCAATAGATTTC
AGTTAAGTTTTCCTCTGGAGCTTCTATTTTCATCTCATCTTCGAATTCTG
TTGCTTTCAAGCAATGAAGAAAGTAAAGCTTTCAGATGTCTAGCTTACAT
TTTGAGAGCCTCTTTATTTTCCAGTTGCATCAAAGGGAAGTTGGTGGAAG
TGAATGAAAACCTGATCAACTCACCTCAGCTGCTGACAGAGAAGGTAAGA
CATCTCACAGGCACTTCTGTTGTCTTCTATAGGTCACCTTTGTAGTGAAC
TTTGCATTTTGGGGTCTTCGTCTTCTCCAAGTACAGAAAAGCCACAAAAC
ATGCATGAACCCTAGCCTCCGTTGCAGGCTTCTCCCACAGCGACTTTTCA
ACTTATTAGGGCAGATTCTTTGGCTGGGGGCCGTATCTGCTTGGAGACCG
TATCTGCTTGAGGCCCCGTATCTGATTAGGATCCTGTAAAGTACCGCCTG
GCCCCAATCCGATAAGTTGAAAAGTTCCCGTGGGAGAAGCCTGCAACAGA
GGCTCCATGAACCCTGAGTTCAGGAAATCTTTAGGCCTGTAAAATCCTGG
TATTCACTCTTGCAGTTCTTTCGTGATGCCCTTCCTATTCTCCTAGTGAT
TGTCCAATCTGGTCAATAACAGTTTTAGTTTCAACCACTAGCTGTGGTAT
AAAGGAGTTCCAGTCCTCATTCTCATTCTGACACTAAATGACTGTCCTCT
AGTTCTGTTCTCAACCAGTGGAACCTTGAGTTTTAAACTATAACCTCTTG
TTGACCGTCCAGCTTGAATTGTGAAGAATGAATCAAGAGGGTTGGAAATT
AGTCCTAACGGCCCAGTACCTTTCTCTAACCCTACATCTGCTTGGGGATT
AGTTCTAACGGTCCTGTACCTACAAATGTTTCTCTAACCTTACATCTGCT
TGGAGATTAGTCCTAATGGTCCTGTACCTCTCTCTAACCCTACATCTGCT
TGGAAATGTGACCCAGTTACCTGACCTCATGATGACCTCACACTAACCAA
TTCTCTTCACGCTCTTCCCATGCACAATCCGATAATGATAGCTTATCGCA
GCAGATTCGTCCAATACAATATGCCATGGGCTATTCATATTGTGTACATG
CAGGTCCAAAGTATTATCGTCAATTTAAAATTTTGCAGCAGTACTGTAGG
GGTTACATTGCTGTGATTCTTCATCAAATAATTCTGTCTTGGAAAAAAGA
TCTGTAGGTACCTTTTTGGAGGTACAACGCCATTGTCTTCATATGCCCAG
TCATATTCAGATTCCATAAAGATCTTTTTCTTGATTATACATGTATTTTG
CTCGTGTCAGATCCGTACCAGCAAATACAAATCGATTCATTCCACATTCA
ACTCCCCAAAAGCTTGTAATGCGATAGTTTCATTTTATACGAAGTGGTAC
ATGTATTGCATGCAATGTTCGTCGACGGGTCGAATTTTGTTTTTATTTTG
CCTAGGCCTTTAGTTAACCTTGAAAAATAACGGTCTTTCTTCATGGAGGT
CATGGGGTCACTCATTACAATACATGGAAATCATGGCATCACAGATCTCA
ATTTATCCTCCTTGACAGTATGTAGCATGTACATGAAAACATGATACGAT
ATTTCTTCTGTATTCTTGCCCCATATCACAAAACGTAAGAGATGAGAATG
TGTGATGATGTCCTGCGGATCCGCATCTGTATACAGTTTCCTCCGCCCAG
CCTGTCTCAGGAGTTCGGTCCGTAACTAGTTCACCAGTCTCTAGGCCGTT
TCATCTATCTAGCATGCAGAACACGTGCGAGAAACCCCCTGGCCTGATGA
ACGGCTTCCGTGCGTCAGAGAAAGAACCCCCCGCGGGGACATCTCATCCA
ATCGCCATCAATCATGGCTTAACAGCTTTCGTCATCAGTCATCTGCTGGG
TGGAGGGGGGTTTCCCTCCATCGACTTCCAATACATCATCGGATTCACTG
ACAAGACTTCTCGTTCTGACGCTCAATTATTGATGCTGAAGGAAAATAGG
CAAACTGTTGCGGCAAAAGCATCTTATTGGACAAATAACAGACCTACCTT
CATCCTTAGACGTAATCCTTTGAGTTTTGCATGATTTCTAGACTAAAATG
GCCAAATTTATCTCATATTCATCCTTTGACATAATCCTTTGAATTTCCAT
AACTTCTAGACTGAAATAGCCACATACTTAGGTCGCAAAATGAGAACTTT
TGTCATAACTCAGACAAAGGCACGTTTCCGTAAATGAATGAATGTGCCCT
CCATGTCGTTATGGATTTTCATTAACAGAATTTGTCTTTTGAATGATGAC
GGTAATCTGTTTAACGTGCTAAGCACCTGCACACCCTATTATATCCATCA
CACTTACGTCGAAATTTATTGGCATTTCAGCATGTCGTAAACCAGTAGAA
TTTGAAACTTTTTCAAAAAGTTCTAGGACCTGGTCTCCATTCAAGCATTC
AACTTCCCATAGTCTCCCCCTCATTCACACCTAACGTTACTGATTTTTAA
AAGGGGGTCGCCTGCAAAGAAATTGTCACAACGATTTAAGTTTTAGGGGG
CATTATAATAATTAGAGTTTACGATAATAATAATAACCTTTATTGTAAAT
TCATGCCCTGTCGGGCTAAGTACAGGCATACAGATACAAAAGTCGTGGTA
AAGTGCTTAACATGACACTAACAACATGACTTCTACTTCTAATCTGAAAC
ATACAGATCCAGCACTGCGAGATACCATATTTACATAGAGGAGGTCTCAT
ATCAGTTAAACGATCCAGCGGACAGGACCGTTAGGAAAACTGCTGAGAGA
GGGTAATGTGGGGTAATTGATGACGTTTGAATGGCGAGGCACGTGCAGAG
CGTGGTGTGATTTAAGCCTTCTTGATGACAACACCTCTCTGATACGGCGA
TTGGAATCCGCAGGACATACATCAGGATTTGAAACGACAGCCATCTAACG
GTCAATTTAGCGCAAATGAAAGATCGCAGGGAGGCTTTTATGGTGTCGAA
GGTGATGAGAGAGTAGATTGAGTGGTGAGGAGTTATTACGCCGAGTTCTC
GGGGTGGCCAGGCGGTCACCAGGTCAGCGTGATCTACGTTGAAGTACTCG
GGCTGTCGAGCAGATTTCGCCAAGACTGGTTTTAAGCTTTAATGCCCAAC
ACGACAAAAACTGGACACACTTTCGGCTGCATGGCANCGTATATACAGAT
CCAGTACTGCGAGATACCGTATTTACATAGAGGAGGTCTCATTTAAACGA
TCCAGCGGACAGGGCCGTTAGGAAAACTGCTGAGAGAGGGAATGTGGGAT
AATTGATGACGTTTGAATGAGGCACGTGCAGAGCGTGGTGTGATTTAAGG
GTTCTTGATGACAACACCTCTCTGATACGGCGATTGGAATCCGCAGGACA
TACATCAGGATTTGAAACGACAGCCATCTAACGGTCAATTTAGCGCAAAT
GAAAGATCGCAGGGAGGCTTTTATGGTGTCGAAGGTGATGAGAGAGTAGA
TTGAGTGGTGAGGAGTTATTACGCCGAGTTCTCGGGGTGGCCAGGCGGTC
ACCAGGTCAGCGTGATCTACGTTGAAGTACTCGGGCTGTCGAGCAGATTT
CGCCAAGACTGGTTTTAAGCTTTAATGCCCAACACGACAAAAACTGGACA
CACTTTCGGCTGCATGGCACCTGTATTTGTCAAAGAATGAATCCACGGCA
TCTACTAGTGCGTCTATCAGCTTATGGGCACGTGACACATTAAGCAGTGG
AGCAAATGGAGCATAGTTTATGACGTCCTCCGTCTCTTCTTGATGCCATG
GTGGAAGCGCCCTGCTGATATATATTTATATTCCCCTTCCAGTGGGAAGG
GGGATATATTGTTTTTGCTTGCCTGTTCTTCTTCTTCTTCTTCTTCTTCT
TCTTCTTCTTCTTCTTTCTTCTTCTTCTGCCAAAAACCAAGTAGATGTGC
GGTGGCAGCTCTACTAATGGTATTGCAGAAAGTTATATGTACCTTATGTT
ACAATGTACGGATGTTATATTTGAGATGTAGGTACCTATAGGAAAGGTGA
ATACACCTGACAATAAATTATGCTAATGAGTACCTTATTTGCATAATCTA
TGCATAAACTTGTATTTCCCTTACCGTAAAAGCTGCGGATGTCATCTTTG
AAATGAAGGTACCTTTAGGAAAGGTGAATGCACCTGGACATAAATTATGC
TAATGAGGACCTCATTTGCATAATTTATGCATAAACTTGAATTTTCCTTA
CCGTAAAAGCTATGGATGTCATATTTGAGTTGTAGGTACCTTTAGGAAAG
GCGAATACACCTGGCCATAAATTATGCTAATGTGGACCTCATTTCCATAA
TTTAGGCATAAACTTGTATTTCCCTTACCGTGAAAGCTACGGATGTCATA
TTTGAGATGTAGGTACCATTAGGAAGGGTAATAAAACCTGGCCATAAATT
ATGCTAATGAGGGCCTCGTTTGCATAATTTATGCATGTCCCTCACCGTAA
AGGCTACGATTGTCATATTTCAGATGTAGGTACCTTTAGGAGAGGTGAAC
ACACCTGACCATAAATTATGCTAATGGCGACCTCATTTGCATAATTTATG
CAGAAACTTCATAATACCCTTACAGCCGATGCTAAGGATGTCATATTTGA
GGTAATGGAAGGGGAATATCCTGCATTTTCCCGAAAATGTTGCCATTCTA
GTTCTTCTTTTTATTACCTTCGACAAGAAGGTTATATTTTCGTTAGCGTT
TGGTGTGTGTGTCCTTCCGCCTGTCAACACTATAACTCAAGAATGCCTGG
ATGGATTGTCTTGAAACTTGGTAAGTGGGTAGGTCTTCTTGTTTGATGTT
AATTTTTCATGATTTTTTTTTCAGCCGAGTTCAGAAGGCTACATCGCCAT
CGTGCTTCCAAAGTTCGGCGAAAGTGACAAAGAGATGGCCAGGCTGCTGT
CCCAACAACAGTACCAGGACGCACTGGAACGTAGGGAACGAGAAGTCCCA
TCGGCGGTCCGGGAACGAGAAGAGGGCCAGTCCTGCTCCAAAATGGAGGA
GCAAAGTACTTCCAGCGCGGATCCGGGAAAAAAACGGGCGGGGGAAAGTA
AAGATGCTGCCGACGAGCCACAACAGAAGAGAGCTAAGCTAGAAGTGACG
GATAAGGAACAACTATCTTCTTAG Coding sequence (CDS) from alignment at Sc0000199:185739..194262- >transcript:BL95895_evm1 ID=transcript:BL95895_evm1|Name=transcript:BL95895_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=585bp|location=Sequence derived from alignment at Sc0000199:185739..194262- (Branchiostoma lanceolatum)
ATGATGAGGGTCTGTATTGTGACACTAGCGGCATCGCATCCACTGGTGGC
TGATGGGAAGACTGTGGCCAGGGTCGACTTCCAGGTCACGGAAAAGGTCA
ATCGGCTGGACAACAAGGTCATCGGCAAGGGCAAGAGGGGTGCCCAGTGG
CTGCAGGAGTCTTCCCCTCTGTGCCGAGTGACCTGTACCGACAACACTGA
GTTCACTATATACAGTTGCATCAAAGGGAAGTTGGTGGAAGTGAATGAAA
ACCTGATCAACTCACCTCAGCTGCTGACAGAGAAGCCGAGTTCAGAAGGC
TACATCGCCATCGTGCTTCCAAAGTTCGGCGAAAGTGACAAAGAGATGGC
CAGGCTGCTGTCCCAACAACAGTACCAGGACGCACTGGAACGTAGGGAAC
GAGAAGTCCCATCGGCGGTCCGGGAACGAGAAGAGGGCCAGTCCTGCTCC
AAAATGGAGGAGCAAAGTACTTCCAGCGCGGATCCGGGAAAAAAACGGGC
GGGGGAAAGTAAAGATGCTGCCGACGAGCCACAACAGAAGAGAGCTAAGC
TAGAAGTGACGGATAAGGAACAACTATCTTCTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000199 | genome | Sc0000199:185739..194262 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95895_evm1 |
| Biotype | protein_coding |
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