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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95898_evm0 >transcript:BL95898_evm0-protein ID=transcript:BL95898_evm0-protein|Name=transcript:BL95898_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=698bp
MCRRAHQHGSATDLDEYKEQEALRILDVPETRSSEPLKLAVDAVQDSAGE
DALASHSRRQMDDGRVASYLAPYKGWHYYKVPVTGAMTSSNVKLTCEAAG
YVTPCNGDSGCSYASSACVITGLDNCGNPMMEISQALCGSSPSGCSQLYG
VYMFMTNWGPDDACGAESGSWCVGGSGQQDKYAFCAADRIVTTAAPRETT
TAPDKGPRNCCGSILRHETEEVDQSTSYSVPDGWTMCYIDQRDTAYYNTP
CRDLLQGLPNYGDADQLLAAGGNFGCWHGNTGSSPGAAFATNNVIEQSCR
DNIQQGNQLASWSPSTTTFGVCIKGITCEPIATTAAATKEPKIQPASTAM
PVQDLMASTSCTNDYMELAIPVDELTDITLNDLHWEPDQNCGATTNGTHY
LFRTDLYGCGTQVSFDPKYVIFLNTINILSIEQKIGVITREGGIKITSKC
EYERQQWVDSTFLPIPGGLNFTEEGFGQLEVRLSMFPTRQYQTPFLADQY
PIHLKLRQHMYMQLEVQGHGQNLAVLALNCKATMSPEPNDTLNYQLINDG
CASDPTLDIFSIDDPAKERFGFEAFRFIQEVKTVYVHCEVMVCDAADPGS
RCAEGCVARRKRATEEKVDMIGRHMIYLGPVTLDDDDAAASNLRDRRSAP
WSMLAAGGGLMALALAVMGAAIVLKRSRREEWAYRGLTDVEVEEEEEE Run BLAST on NCBI mRNA from alignment at Sc0000200:185362..191931+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95898_evm0 ID=transcript:BL95898_evm0|Name=transcript:BL95898_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=6570bp|location=Sequence derived from alignment at Sc0000200:185362..191931+ (Branchiostoma lanceolatum)
ATGTGCAGACGTGCCCACCAGCACGGTCGGGATACGCCCGTGATTCAGTC
TGGTATAGTTGTACAAAGGGGTACATTGACATCCTCCAAAGGATACTACC
AGCATAGCAGGACTTCAATTAGTTTTTGCAATCATGTATGAACGATGTGT
ATCGAAGGGGGATCAATTTTCTCTAACAACATAGTTTACGTGATGAACCC
ACCTGTCTGTCTGCTTGTTTGTTTGTTTGTTTTTGTTTGTTTGTTTGTTT
GTTGAACTAAAAGATGAACATTTTTTTTCAATAATGCTGGCTCACTTTGC
ATGCTTCAGCATATCTTGTACCAATTCTAGCTATGAATATAATTGAAGCA
TTGGTGAAGTCGAAGGAAAACTCCTAAAACTTAAAGTCCCTTGTTTACTG
TGCTACCGAAAATTACGACAGGACTGACTTAAAAGAAAGTAATACAATTA
AAGTCGACCTCACCCCACTTGTGTAACCTGGTGTATGATAATGTATCTGC
CATCTATTTCTTATGAGTCGATGAAAACATGCATAGCTAGCATAACTTTC
GAAACGGAATTTATTTACACAATACTACGTCAAGTCTGGATGTGCGGCGA
TGTGAAAAAACGTCTTCAACGTCATCAACATACAACAAACAACAAGCAAG
ATTTAGATATTTAAAAAAATATTTCTTTTAACCACGACGTGCTTCTCCCC
AAATCCAACAACAGCTGAAAATATATTGCTTATGATTTTGAGTTAACTCT
GTAGCAATTGTTTCCTCACACGCAGGCAGCGCCACAGACCTGGACGAGTA
CAAAGAGCAGGAGGCGCTCCGTATTCTGGACGTCCCGGAAACAAGGAGCA
GTGAACCACTTAAGCTTGCTGTGGATGCAGTCCAGGTCTGTTTGGTATTC
AAGTATTCAAAGGGGCTATCTTAAGATTCATGAAACGCAAGTCATGCTGC
ACAACTTCAATTGTATGCAGTTGCATGTAAAAAACACATGTAAAGCAACG
AAAGATGGGGTTACAACGAAGGTTTTAAGAAAGCCATTATTGCATACCAA
CAGCGCGTCAAACTCTGTTGTTGTTCTGAACAAAAGTTCCTGTTTTTTCG
CTCTCGGTTAAGTCTAGTTGACTTCCCCTCAACCATTTAGCTACTGTTAT
TGACCTAGCCGTGTACACATCTACCTGGACATTCGTTAATTGATTGATTA
TTTCAATCACTACATATCACTACTCTCGACACAGGATTCCGCTGGTGAAG
ATGCGCTGGCCTCCCACAGTCGCCGTCAGATGGACGACGGTATGTCCCTT
ACCAACTGCCACTCACTAATATACATACTTGTGCATAGATATAGGGCTCG
AATCAATGACATATTCAGATTTATCTCTGACCGCTGCTTTATGGCTAGAC
ATCAATCACAGCTACGGTGTAAAATTCAAGGAGGGGGTCACAAATAAGAA
ATAATCTAAAGTAATTTTTTCAGAGCTTCAGACTGATTCTTTGTCTTTTT
TACAGGACGAGTGGCGTCATATCTGGCTCCGTATAAGGGATGGCACTACT
ACAAAGTACCTGTCACCGGAGCCATGACGTCATCCAACGTGAAGCTTACG
TGTGAGGCAGCCGGGTACGTCACGCCGTGTAACGGGGACAGCGGGTGTAG
TTACGCCTCGTCCGCCTGCGTCATCACAGGCTTAGACAACTGTGGCAACC
CGATGATGGAAATATCCCAAGCCCTGTGCGGCAGCAGTCCTAGCGGCTGT
TCTCAGCTGTACGGTGTGTACATGTTCATGACCAACTGGGGACCTGATGA
CGCTTGTGGCGCAGAGTCGGGAAGTTGGTGCGTCGGGGGTTCTGGACAGC
AGGACAAATACGCCTTCTGTGCAGCAGGTATTTTGAAAAGTTGTGCTTTT
AGCTGACTTCTCTCAGGCTAGGAAATGTTTACTGTTGTGATAGATTGCAG
TGACCGTTACGGCGTACCAGGATTATATTTCAAAGAGTCCCAATGGTTTC
TTTTCGACAGGCGATTGAGCTAAGAGTGAGCCAGAGGTGCTTAGAACGGC
CAGAGTAACATTATGATAGGAAGTTGTGTGCTAGAGCCCTAGAGATGCTT
GCAAAGGCCAGAGCGACATGGAATGTCAAGAGTGAATTAGAGGTGCGTAG
AGTGGCCAGAGCGACAAAGGATTTTAAGAGTGAATCATAGGTGTTTATTA
TTTTTTCTTGTTGTTCTGTTGTAGACCGGATTGTTACAACTGCTGCGCCT
CGAGAAACAACCACTGCACCCGATAAAGGACCGAGTAAGTAATTTGAATT
GATACAATAAGACTTTTATTCTGTCTAAAAATGTATTCAATTGAACATAG
AAATATTTCAATAGAACCATAAATGATTTCATTGTACGCTGATTAACTAT
GTGTAGATGATATAACTAATGATATTCGACCACTGACAGATAAAACCAAC
TATTACCAACTTTATAGGGAACTGCTGTGGTAGCATACTGCGGCACGAGA
CCGAGGAGGTTGACCAGTCCACCAGCTACAGTGTCCCAGATGGTTGGACC
ATGTGTTACATCGACCAGCGCGACACCGCCTACTACAACACCCCATGTCG
GGACCTGCTCCAGGGACTTCCCAACTACGGAGATGCCGATCAACTGCTCG
CAGCCGGAGGGAACTTCGGGTGCTGGCACGGGAACACCGGTAGTTCTCCA
GGAGCGGCATTTGCGACCAATAACGTCATCGAGCAGAGCTGCCGAGATAA
CATCCAGCAGGGGAACCAGCTGGCATCCTGGAGTCCGAGTACTACAACAT
TTGGCGTTTGCATCAAGGGCATCACCTGTGGTGAGTACTGTTAGGCTGGG
CTTACACACGCGTTTCTAAGTCCACTCGGAGCAGCACACTCCGAGCGAGT
GTATGTGCTTCGTGCACTCGGAGCACACTCAGAGTGTACTTGGAAATGCG
TGTGTAAACCCAGCCTTATGTAGACTACTACGAAGTGTCTGAAAAATAAT
TCACTTGTGATTTTATTGTTCACAATTAGCAAGCCTTTACATGTACGTGA
TGCCGGATCTGGTACGAATTTGTCTTCATTTTTCTTGCAACAGAGCCGAT
TGCCACCACTGCTGCAGCAACCAAAGAGCCAAAGAGTGAGTAATGTGTAG
ACATAGCTCTGTTAGATCAACCACTGTGTTTCAACGACATCATCGTCAGA
TAGACAGCATGCTTGTAAATTTGTTGACATATTCTCTCTAACATCTGGAA
TGTAGACTATTTTATGTGATTGCTTGGAATGATGTATGGCAGCCTTTATC
CTTAGTTGATGGATAAATGAGAAATGAAGAAAAAAAATACATGTGTCCGT
TGATTAGACGCGTCCACTGTTTCATCAGTGATTATACGAGTAAAATGAAT
CCTCGTGATACAACAACACATGGCTGAATGTGCCGTGATTGAGGAATCCA
TCATATTATTCATGTTTAACTTTCCACAGTCCAACCAGCCTCAACTGCCA
TGCCAGTGCAAGATCTAATGGGTATGTATTTCGTTTCTCAAATATATTAC
CAGGTACCGGTGTATGGTAGTTTTACGAACATTACAATGTTGTTTATGAA
TTAGAGCTCCAAGTCACCAAGTTGATAGATGTGCATACTGTCATACATGC
ACGCTACGTTAGGACTGTACATGTAAAACAATAATTTCTTCCACCTCTTA
TCTTCTACGTCGATTTTCTGTTTTAGCCTCCACATCCTGCACCAATGACT
ACATGGAACTGGCGATTCCTGTGGACGAACTGACTGACATCACCCTCAAC
GACCTTCACTGGGAGCCTGACCAGAACTGTGGCGCCACAACTAACGGTAC
TCACTACCTTTTCCGTACAGATCTGTACGGCTGTGGAACACAGGTATGTG
TACTATGTGTCGATGGAAAAAGAGTTCGCAACTATTTAAGTTCATTGTTC
TTTGGCTTGATACTGAGTAGATAATCATTTTATAACGAAGTCAAGATTCT
AATCATCATCATCATCATAATCATCAGTTGAGCAACAATATCAATAACAA
CCTTTAAGTATTGTCTGACAGCCTTGTTAAGTGTTTATTTTATAACGAGC
ATCTTTTGTCCATAAGGTGTCCTTCGACCCGAAGTACGTCATCTTTCTGA
ACACCATCAACATCCTGAGTATAGAACAGAAGATCGGCGTCATCACACGA
GAGGGGGGCATTAAGATTACTTCCAAGTATGTAAAGCGACATTTGACTTT
CATACCGTGACATTTAAGATTGCTCTTTCTTTTTGCTGTCTATCTCTGTG
AAGATATCTGGGTGGTATTTCTTGTTGATGTCATTATCTTCAAGCTTGTT
AATAGCAATGGCAATATCGATGATGCTGTAGCTAGTAAGACCAATAAAAC
TGATGTACGTTTCGAATGAGATTGCTGCCATGAAGCATACTTTCTCAAGG
AATCTTAACAGATTGATTTAACATCCATATTACTTGGCTATTAGCCCTTA
AGCTGCCAGGTTTTTTAGCCAAGTAAAAATCAAAAATGTTTGACCCCTGA
CCTCCCTCACGAAACCCGCGAAACACCCGGCGGCGCTAACTCCCCTAACT
TCCCGGCTTCGCGCGCTACACGCACGCAAAGCTGTTTTGTTCTGGGGAAT
ACCCTATCCCGGTTATAACCGGGTCCAGCACACAAGGCATATTTCTGTAT
CCCTAATTAAGTCGGGACTGGCAGCTTAAGGGTTTTAGGGGTACAAAAAA
GCTAACACACCATTACTACGATAGAATATGAATATGCACTGTAACGATAG
CAATGAATAGACGTGAAGATTGATACGCAAAGGACTCCCTCTATCCTGAC
AACAAATATTTCCTTCTTTTCACAGGTGCGAGTACGAGCGTCAGCAATGG
GTGGATTCCACCTTCCTACCCATCCCGGGCGGTCTGAACTTTACGGAGGA
AGGGTTCGGGCAGCTGGAGGTTCGTCTCTCCATGTTTCCCACACGTCAGT
ACCAGACTCCGTTCCTGGCTGACCAGTACCCCATTCACCTCAAACTTCGC
CAGCACATGTACATGCAGCTGGAAGTACAGGGACACGGGCAGAATCTCGC
CGTGCTGGCGCTGAACTGTAAGGCGACCATGTCACCTGAACCCAACGACA
CCCTGAACTATCAACTCATCAACGATGGGTAGGCTGAACGTCTAGAGTTT
AGCAACATACTAGTAGACTGATCGATGTACATAGTGTCTTATGTATCTGT
ATTAATTCTGTAAGTTTATTTGAAGATACATGCTTATTTTGAGTAGGCAC
GTTTTTAGGGTTCATCATCGGATAGTTATATTTCAATGCCTTAAAAAGCT
TAAGTTAAACGTTTGTACAACATGTAGACCAAAAGCACAAAGTATTCTTA
CTTCAATCTGAGAAATTTTGTCTGTACTCATGTAAGATTTATGTTCTTGC
AGCTGTGCTTCCGACCCAACCCTGGACATCTTCAGTATTGACGATCCCGC
CAAGGAACGCTTTGGTTTTGAGGCGTTCCGCTTCATCCAGGAGGTGAAGA
CGGTGTACGTGCACTGTGAGGTGATGGTCTGTGACGCCGCTGATCCCGGG
TCCCGCTGTGCAGAGGTAAGCCCCATAGCATTCGGGCACTTGAAATATCT
GAATTTGAATGTTGTATTTCTTAGTTGAAAGATAAGGAAAGAACAACTGC
GTCTGGTTAAAGGTTTCCAATAACAACACGTGAATTACTTTTCAAAAATC
TGTATACTTGTTTGTTATAAGTTTGTTAAATCTTAAGTTTCACGACCTGT
ACCTAGCCCGTCGAGGCATGGATGTGCAATAAAGGTCTTTCATTAATTAT
CACTTCACTTCCCTTTCAGGGTTGTGTTGCAAGGCGCAAAAGGGCCACTG
AGGAGAAGGTCGACATGATTGGACGCCACATGATCTACCTGGGACCAGTC
ACTCTGGACGATGACGACGCAGGTACGTCTTATAATTGTGTCCATGTAGA
ATGTTCGTTTTCCGGGTGATATATTATTTACAGCAAGTTACGGTTAGTTT
AATTCCTTCCTGTACCCACACAGGGCAGCGCCTATCTCCGTTTCAGTAGC
CCTTGGGCCACACAATTTTGTGCAATCACTTCTGTAGGGGGCTAGACCAT
GGATAGTGTTCAACGTCCATACTGTTTCCCAAAAAACTGAGTGCTAAACA
GAGAAAGCAGTATGTACAATTTCTAAAGTCTTTGATATGACTCAGTCGGG
GATCAAACTCACAACATACATGTACCGTATGCAAGACGAACACGAGCTAC
AAATGATGGGCATACAGATAGGCAGATAAGATATCATAAATAATTGGATC
AATAGAGACTCATGTCTTCTAATTCCATTTCATCCTAGCTGCTAGCAACC
TGCGTGATCGCCGCAGTGCACCCTGGTCCATGCTGGCTGCCGGAGGTGGT
CTGATGGCGCTCGCCCTTGCCGTGATGGGCGCGGCCATCGTGCTGAAGCG
GTCCCGCCGTGAGGAGTGGGCCTACCGGGGTCTGACCGACGTGGAAGTGG
AGGAGGAGGAAGAGGAATAG Coding sequence (CDS) from alignment at Sc0000200:185362..191931+ >transcript:BL95898_evm0 ID=transcript:BL95898_evm0|Name=transcript:BL95898_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=2097bp|location=Sequence derived from alignment at Sc0000200:185362..191931+ (Branchiostoma lanceolatum)
ATGTGCAGACGTGCCCACCAGCACGGCAGCGCCACAGACCTGGACGAGTA
CAAAGAGCAGGAGGCGCTCCGTATTCTGGACGTCCCGGAAACAAGGAGCA
GTGAACCACTTAAGCTTGCTGTGGATGCAGTCCAGGATTCCGCTGGTGAA
GATGCGCTGGCCTCCCACAGTCGCCGTCAGATGGACGACGGACGAGTGGC
GTCATATCTGGCTCCGTATAAGGGATGGCACTACTACAAAGTACCTGTCA
CCGGAGCCATGACGTCATCCAACGTGAAGCTTACGTGTGAGGCAGCCGGG
TACGTCACGCCGTGTAACGGGGACAGCGGGTGTAGTTACGCCTCGTCCGC
CTGCGTCATCACAGGCTTAGACAACTGTGGCAACCCGATGATGGAAATAT
CCCAAGCCCTGTGCGGCAGCAGTCCTAGCGGCTGTTCTCAGCTGTACGGT
GTGTACATGTTCATGACCAACTGGGGACCTGATGACGCTTGTGGCGCAGA
GTCGGGAAGTTGGTGCGTCGGGGGTTCTGGACAGCAGGACAAATACGCCT
TCTGTGCAGCAGACCGGATTGTTACAACTGCTGCGCCTCGAGAAACAACC
ACTGCACCCGATAAAGGACCGAGGAACTGCTGTGGTAGCATACTGCGGCA
CGAGACCGAGGAGGTTGACCAGTCCACCAGCTACAGTGTCCCAGATGGTT
GGACCATGTGTTACATCGACCAGCGCGACACCGCCTACTACAACACCCCA
TGTCGGGACCTGCTCCAGGGACTTCCCAACTACGGAGATGCCGATCAACT
GCTCGCAGCCGGAGGGAACTTCGGGTGCTGGCACGGGAACACCGGTAGTT
CTCCAGGAGCGGCATTTGCGACCAATAACGTCATCGAGCAGAGCTGCCGA
GATAACATCCAGCAGGGGAACCAGCTGGCATCCTGGAGTCCGAGTACTAC
AACATTTGGCGTTTGCATCAAGGGCATCACCTGTGAGCCGATTGCCACCA
CTGCTGCAGCAACCAAAGAGCCAAAGATCCAACCAGCCTCAACTGCCATG
CCAGTGCAAGATCTAATGGCCTCCACATCCTGCACCAATGACTACATGGA
ACTGGCGATTCCTGTGGACGAACTGACTGACATCACCCTCAACGACCTTC
ACTGGGAGCCTGACCAGAACTGTGGCGCCACAACTAACGGTACTCACTAC
CTTTTCCGTACAGATCTGTACGGCTGTGGAACACAGGTGTCCTTCGACCC
GAAGTACGTCATCTTTCTGAACACCATCAACATCCTGAGTATAGAACAGA
AGATCGGCGTCATCACACGAGAGGGGGGCATTAAGATTACTTCCAAGTGC
GAGTACGAGCGTCAGCAATGGGTGGATTCCACCTTCCTACCCATCCCGGG
CGGTCTGAACTTTACGGAGGAAGGGTTCGGGCAGCTGGAGGTTCGTCTCT
CCATGTTTCCCACACGTCAGTACCAGACTCCGTTCCTGGCTGACCAGTAC
CCCATTCACCTCAAACTTCGCCAGCACATGTACATGCAGCTGGAAGTACA
GGGACACGGGCAGAATCTCGCCGTGCTGGCGCTGAACTGTAAGGCGACCA
TGTCACCTGAACCCAACGACACCCTGAACTATCAACTCATCAACGATGGC
TGTGCTTCCGACCCAACCCTGGACATCTTCAGTATTGACGATCCCGCCAA
GGAACGCTTTGGTTTTGAGGCGTTCCGCTTCATCCAGGAGGTGAAGACGG
TGTACGTGCACTGTGAGGTGATGGTCTGTGACGCCGCTGATCCCGGGTCC
CGCTGTGCAGAGGGTTGTGTTGCAAGGCGCAAAAGGGCCACTGAGGAGAA
GGTCGACATGATTGGACGCCACATGATCTACCTGGGACCAGTCACTCTGG
ACGATGACGACGCAGCTGCTAGCAACCTGCGTGATCGCCGCAGTGCACCC
TGGTCCATGCTGGCTGCCGGAGGTGGTCTGATGGCGCTCGCCCTTGCCGT
GATGGGCGCGGCCATCGTGCTGAAGCGGTCCCGCCGTGAGGAGTGGGCCT
ACCGGGGTCTGACCGACGTGGAAGTGGAGGAGGAGGAAGAGGAATAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000200 | genome | Sc0000200:185362..191931 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95898_evm0 |
| Biotype | protein_coding |
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