|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95960_evm1 >transcript:BL95960_evm1-protein ID=transcript:BL95960_evm1-protein|Name=transcript:BL95960_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=357bp
MHASRTAPTLKQREQALTMSLHNADASSFHFIVPLNVGGHHYTSTLPVLR
KYEESMLAAMFSGRHIVVKDKDDRYFIERDGSNFGHILNFLRNSSRLPPL
DKVKDVYQEALYYGIKPLADILRRHRSIHEGEEVARWAEQCPAAQEKADE
IADLVLKKFADTLRRTSRVVLQFDQEPSWESVHLTGSTGETLGNYYKPYD
FQQDEGHKDHKCPLPDISMGEMSEKEREKTLSFLDHHFEKLGYKFDQEPS
WESVFLTGSTGETLGNYYKPYDFQQDEGHKDHKCPQPEISMGEMSEKERE
KTLSFFDHYFEKLGYKVEVVAGECREAVWSQKITWPGDGRDSITVYCAKQ
IYTLTFT Run BLAST on NCBI mRNA from alignment at Sc0000244:249268..252409+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95960_evm1 ID=transcript:BL95960_evm1|Name=transcript:BL95960_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3142bp|location=Sequence derived from alignment at Sc0000244:249268..252409+ (Branchiostoma lanceolatum)
ATGCATGCATCTCGGACCGCCCCCACGCTTAAGCAGAGGGAACAAGCTCT
CACCATGTCTCTACATAACGCGGACGCTTCGTCGGTAGGTCCTACGGGGT
TTAAGCGGGGCATTGCGTGTTGCATAGCCAGGGTTCACGGTTTAGGTCTA
AATAGCTGAGAGGAGACTTCTGGACAAGCTAGCGGACCTGTTACACTACT
AGATGTATAGATGTTACTTTTCAATCATATGCATGTAACATAATGTGACT
CCATTAGAAAATATGGGAGTTATTGTATTTTTTCGGAAATATGAATCGTG
AGGTGTTAGTGGAATGGAATGACTAATGATTGACAGGAATGGGATTGTTG
GTTGTGCCAATACAGTTTAACAGACGTCTAGACAGTGATCAAATAGGGCA
AGTAGGGCATTGACACGGCTAAAGATGCCAGAATTGCGGCGTTTAGCGCC
CAGGGCGACTGCTTATGCTTCGGTCCGAACTGCACCGGTACCCGTCGGGG
ATGTAGCCCCGGCCGTCAATGGCCGTGCTCTGAAGTTTCCTTCTCACTGC
CCTGCAGGGGTCCCGGTGCTCCGGCGGGCAATCAATTTTGAGGAGGAGGG
CCCAGTATAATTTTTATACGCCTTTTGCTTTGTCTTGCACCTGTTTTTAT
CTATTGTTTATATAGAATTATATGTATTATGTATTTTCTTGATGTGCAAA
TAAATAAATAAACAAACATACAAATTGATATTTGTCCCGGTGGACCTCTC
GATGTTCTCACGGTTAGGTCACGGTGTCTTTTTAAAAAGTTTCTTTTAGG
GGCACGTCTTACCGCGTAGGGCTGACGTCACTGTTGAGTTGCGTAGTGGC
GTGCAAATGTGGTCCTTACACTAAACTTTTGAAACCCCTTTTTTCATTGA
AAATTTTGGTCCATTTTGGATACTTTTGGGCTAGAAGGAACAGGTAGGGT
CTAAGCTTTCCCAGTTTGGTCAAAATTTGTATGATTCAGTCGTTTAGTGG
GCGTAAGGAGATATCTTTGTGGTTTGGTTTAACATGCTCCGAGTGGACTG
TTCCAGGCTGGAAGTAGGTCAAAGTTGACGATTGTTTTCGTCTGTCAGCT
GTTACGAGAGAACGAGCTGGTCAACTGTCTATTTTCTTTGCATGATTCTA
AAGTAGACAGATGTGGCTTTCTGGTGCATAAGAATTTTGGGGGCTTGCAA
TGAAGGTGAATACTTTTCTGAGCCCTTATTTTTGTGCTTTAAAGCATTAC
TGCCTACGGGCAAGTCTATCACTTGTATATGCCCTGTACTGTTTTTTTTT
TCAAGGCTGAGTGGCACCCGGTAAAAAATTAGCGCCGTAAACTAATCGTG
AGAACACCGAGAAGTACCCTTCCGTGCCCGGCAGTCCAACGGGACGAATT
TGTGTCTTCGGGGCCCGACCGAGACTCCACCGGTGCAAATGTGACCGTAG
CATTAGGAGCCCAGACGAGACGATAAATCGTTACACTCTTAGGTACCAAT
CATGTAAAGGTCATGACGTTTCCAAAATATGGTGATTAAAGTAAACTATG
TAGTCCGTTTTTTTTGTATCTCAGTTGTAATGGGTCGATATGGGCCTAGA
GTCTGATACTTTTTGGGGACGCCTCAGGAGCGAGCCAAAATAAAACTTAT
TTCTTTTTTTTTCTTTCACTTGTACCGGTACCGGTACCGTTTCGTGTTGT
GGCAACTTTTCTTTCAGTCACAAGGTGGGTAGCGTGAACTTCTGCCATGT
TGTGCTCTCGTAGGTAGTATTTTATGCTGTGTCTGCCTCTTTCCATGCAG
GCAGAGAACCTCAAGTTATTTGTTTGAGCAGCTGATACAATGTAGTGAAA
TGTACGATTTTGTTTTTACAGTTTCACTTCATCGTGCCCCTGAACGTTGG
CGGCCATCACTACACCAGCACCCTGCCGGTACTGCGCAAGTACGAGGAGT
CCATGCTGGCGGCCATGTTCAGCGGCCGCCATATTGTTGTGAAGGATAAA
GACGATCGCTACTTCATCGAACGAGACGGCAGCAACTTCGGCCACATCCT
GAACTTCCTGCGCAACAGCAGCAGGCTGCCTCCTCTAGATAAGGTGAGAA
AAAGACATAGCCGTGGTGATACTTGGGGTGTGGGTGTATGGCGTCGGATA
CTCGTTGGGATGTAGGCGCCGATAAAGCACAAAGGTAACGCTACGCAATG
TAAATCTTCGCTACCTCAGTTGGGTGGATTTCATAATTTCAACGTTATTA
TTAACCGTTATCGATAAAGTGAGACCGGAAAGTTCAATTAGGCCCGCTGT
TCCTTCCCAGGTCAAGGATGTCTACCAGGAGGCGCTCTACTACGGGATCA
AACCCCTCGCCGACATCCTCCGCCGCCACAGGTCGATCCACGAGGGGGAG
GAGGTCGCCAGGTGGGCCGAGCAGTGCCCCGCCGCCCAGGAGAAGGCCGA
CGAGATCGCCGACCTGGTCCTGAAGAAGTTTGCGGACACCCTGCGCAGGA
CGAGCCGCGTGGTTCTCCAGTTCGACCAGGAGCCGAGCTGGGAGTCCGTG
CACCTGACGGGAAGCACGGGCGAGACTCTCGGCAACTACTACAAGCCGTA
CGACTTCCAGCAAGACGAGGGTCACAAGGACCACAAGTGCCCCCTGCCAG
ACATATCCATGGGAGAGATGTCGGAGAAGGAGAGGGAGAAGACGCTGAGT
TTCTTGGATCATCACTTCGAGAAGCTTGGCTATAAGGTGGAAGTCGTCGC
CGGGGAGTGTCGGGAAGCGGTGTGGTCCNACGACCCGCGTGGTTCTCCAG
TTCGACCAGGAGCCGAGCTGGGAGTCCGTGTTCCTGACGGGAAGCACGGG
CGAGACTCTCGGCAATTACTACAAGCCCTACGACTTCCAGCAAGACGAGG
GTCACAAGGACCACAAGTGCCCCCAGCCAGAGATATCCATGGGAGAGATG
TCGGAGAAGGAGAGGGAGAAGACGCTGAGTTTCTTCGATCATTACTTCGA
GAAGCTTGGCTATAAGGTGGAAGTCGTCGCCGGGGAGTGTCGGGAAGCGG
TGTGGTCCCAAAAGATCACCTGGCCAGGCGACGGGCGGGACTCCATAACC
GTCTACTGTGCCAAGCAGATCTACACACTCACCTTTACTTGA Coding sequence (CDS) from alignment at Sc0000244:249268..252409+ >transcript:BL95960_evm1 ID=transcript:BL95960_evm1|Name=transcript:BL95960_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=4296bp|location=Sequence derived from alignment at Sc0000244:249268..252409+ (Branchiostoma lanceolatum)
ATGCATGCATCTCGGACCGCCCCCACGCTTAAGCAGAGGGAACAAGCTCT
CACCATGTCTCTACATAACGCGGACGCTTCGTCGTTTCACTTCATCGTGC
CCCTGAACGTTGGCGGCCATCACTACACCAGCACCCTGCCGGTACTGCGC
AAGTACGAGGAGTCCATGCTGGCGGCCATGTTCAGCGGCCGCCATATTGT
TGTGAAGGATAAAGACGATCGCTACTTCATCGAACGAGACGGCAGCAACT
TCGGCCACATCCTGAACTTCCTGCGCAACAGCAGCAGGCTGCCTCCTCTA
GATAAGGTCAAGGATGTCTACCAGGAGGCGCTCTACTACGGGATCAAACC
CCTCGCCGACATCCTCCGCCGCCACAGGTCGATCCACGAGGGGGAGGAGG
TCGCCAGGTGGGCCGAGCAGTGCCCCGCCGCCCAGGAGAAGGCCGACGAG
ATCGCCGACCTGGTCCTGAAGAAGTTTGCGGACACCCTGCGCAGGACGAG
CCGCGTGGTTCTCCAGTTCGACCAGGAGCCGAGCTGGGAGTCCGTGCACC
TGACGGGAAGCACGGGCGAGACTCTCGGCAACTACTACAAGCCGTACGAC
TTCCAGCAAGACGAGGGTCACAAGGACCACAAGTGCCCCCTGCCAGACAT
ATCCATGGGAGAGATGTCGGAGAAGGAGAGGGAGAAGACGCTGAGTTTCT
TGGATCATCACTTCGAGAAGCTTGGCTATAAGTTCGACCAGGAGCCGAGC
TGGGAGTCCGTGTTCCTGACGGGAAGCACGGGCGAGACTCTCGGCAATTA
CTACAAGCCCTACGACTTCCAGCAAGACGAGGGTCACAAGGACCACAAGT
GCCCCCAGCCAGAGATATCCATGGGAGAGATGTCGGAGAAGGAGAGGGAG
AAGACGCTGAGTTTCTTCGATCATTACTTCGAGAAGCTTGGCTATAAGGT
GGAAGTCGTCGCCGGGGAGTGTCGGGAAGCGGTGTGGTCCCAAAAGATCA
CCTGGCCAGGCGACGGGCGGGACTCCATAACCGTCTACTGTGCCAAGCAG
ATCTACACACTCACCTTTACTTGAATGCATGCATCTCGGACCGCCCCCAC
GCTTAAGCAGAGGGAACAAGCTCTCACCATGTCTCTACATAACGCGGACG
CTTCGTCGTTTCACTTCATCGTGCCCCTGAACGTTGGCGGCCATCACTAC
ACCAGCACCCTGCCGGTACTGCGCAAGTACGAGGAGTCCATGCTGGCGGC
CATGTTCAGCGGCCGCCATATTGTTGTGAAGGATAAAGACGATCGCTACT
TCATCGAACGAGACGGCAGCAACTTCGGCCACATCCTGAACTTCCTGCGC
AACAGCAGCAGGCTGCCTCCTCTAGATAAGGTCAAGGATGTCTACCAGGA
GGCGCTCTACTACGGGATCAAACCCCTCGCCGACATCCTCCGCCGCCACA
GGTCGATCCACGAGGGGGAGGAGGTCGCCAGGTGGGCCGAGCAGTGCCCC
GCCGCCCAGGAGAAGGCCGACGAGATCGCCGACCTGGTCCTGAAGAAGTT
TGCGGACACCCTGCGCAGGACGAGCCGCGTGGTTCTCCAGTTCGACCAGG
AGCCGAGCTGGGAGTCCGTGCACCTGACGGGAAGCACGGGCGAGACTCTC
GGCAACTACTACAAGCCGTACGACTTCCAGCAAGACGAGGGTCACAAGGA
CCACAAGTGCCCCCTGCCAGACATATCCATGGGAGAGATGTCGGAGAAGG
AGAGGGAGAAGACGCTGAGTTTCTTGGATCATCACTTCGAGAAGCTTGGC
TATAAGTTCGACCAGGAGCCGAGCTGGGAGTCCGTGTTCCTGACGGGAAG
CACGGGCGAGACTCTCGGCAATTACTACAAGCCCTACGACTTCCAGCAAG
ACGAGGGTCACAAGGACCACAAGTGCCCCCAGCCAGAGATATCCATGGGA
GAGATGTCGGAGAAGGAGAGGGAGAAGACGCTGAGTTTCTTCGATCATTA
CTTCGAGAAGCTTGGCTATAAGGTGGAAGTCGTCGCCGGGGAGTGTCGGG
AAGCGGTGTGGTCCCAAAAGATCACCTGGCCAGGCGACGGGCGGGACTCC
ATAACCGTCTACTGTGCCAAGCAGATCTACACACTCACCTTTACTTGAAT
GCATGCATCTCGGACCGCCCCCACGCTTAAGCAGAGGGAACAAGCTCTCA
CCATGTCTCTACATAACGCGGACGCTTCGTCGTTTCACTTCATCGTGCCC
CTGAACGTTGGCGGCCATCACTACACCAGCACCCTGCCGGTACTGCGCAA
GTACGAGGAGTCCATGCTGGCGGCCATGTTCAGCGGCCGCCATATTGTTG
TGAAGGATAAAGACGATCGCTACTTCATCGAACGAGACGGCAGCAACTTC
GGCCACATCCTGAACTTCCTGCGCAACAGCAGCAGGCTGCCTCCTCTAGA
TAAGGTCAAGGATGTCTACCAGGAGGCGCTCTACTACGGGATCAAACCCC
TCGCCGACATCCTCCGCCGCCACAGGTCGATCCACGAGGGGGAGGAGGTC
GCCAGGTGGGCCGAGCAGTGCCCCGCCGCCCAGGAGAAGGCCGACGAGAT
CGCCGACCTGGTCCTGAAGAAGTTTGCGGACACCCTGCGCAGGACGAGCC
GCGTGGTTCTCCAGTTCGACCAGGAGCCGAGCTGGGAGTCCGTGCACCTG
ACGGGAAGCACGGGCGAGACTCTCGGCAACTACTACAAGCCGTACGACTT
CCAGCAAGACGAGGGTCACAAGGACCACAAGTGCCCCCTGCCAGACATAT
CCATGGGAGAGATGTCGGAGAAGGAGAGGGAGAAGACGCTGAGTTTCTTG
GATCATCACTTCGAGAAGCTTGGCTATAAGTTCGACCAGGAGCCGAGCTG
GGAGTCCGTGTTCCTGACGGGAAGCACGGGCGAGACTCTCGGCAATTACT
ACAAGCCCTACGACTTCCAGCAAGACGAGGGTCACAAGGACCACAAGTGC
CCCCAGCCAGAGATATCCATGGGAGAGATGTCGGAGAAGGAGAGGGAGAA
GACGCTGAGTTTCTTCGATCATTACTTCGAGAAGCTTGGCTATAAGGTGG
AAGTCGTCGCCGGGGAGTGTCGGGAAGCGGTGTGGTCCCAAAAGATCACC
TGGCCAGGCGACGGGCGGGACTCCATAACCGTCTACTGTGCCAAGCAGAT
CTACACACTCACCTTTACTTGAATGCATGCATCTCGGACCGCCCCCACGC
TTAAGCAGAGGGAACAAGCTCTCACCATGTCTCTACATAACGCGGACGCT
TCGTCGTTTCACTTCATCGTGCCCCTGAACGTTGGCGGCCATCACTACAC
CAGCACCCTGCCGGTACTGCGCAAGTACGAGGAGTCCATGCTGGCGGCCA
TGTTCAGCGGCCGCCATATTGTTGTGAAGGATAAAGACGATCGCTACTTC
ATCGAACGAGACGGCAGCAACTTCGGCCACATCCTGAACTTCCTGCGCAA
CAGCAGCAGGCTGCCTCCTCTAGATAAGGTCAAGGATGTCTACCAGGAGG
CGCTCTACTACGGGATCAAACCCCTCGCCGACATCCTCCGCCGCCACAGG
TCGATCCACGAGGGGGAGGAGGTCGCCAGGTGGGCCGAGCAGTGCCCCGC
CGCCCAGGAGAAGGCCGACGAGATCGCCGACCTGGTCCTGAAGAAGTTTG
CGGACACCCTGCGCAGGACGAGCCGCGTGGTTCTCCAGTTCGACCAGGAG
CCGAGCTGGGAGTCCGTGCACCTGACGGGAAGCACGGGCGAGACTCTCGG
CAACTACTACAAGCCGTACGACTTCCAGCAAGACGAGGGTCACAAGGACC
ACAAGTGCCCCCTGCCAGACATATCCATGGGAGAGATGTCGGAGAAGGAG
AGGGAGAAGACGCTGAGTTTCTTGGATCATCACTTCGAGAAGCTTGGCTA
TAAGTTCGACCAGGAGCCGAGCTGGGAGTCCGTGTTCCTGACGGGAAGCA
CGGGCGAGACTCTCGGCAATTACTACAAGCCCTACGACTTCCAGCAAGAC
GAGGGTCACAAGGACCACAAGTGCCCCCAGCCAGAGATATCCATGGGAGA
GATGTCGGAGAAGGAGAGGGAGAAGACGCTGAGTTTCTTCGATCATTACT
TCGAGAAGCTTGGCTATAAGGTGGAAGTCGTCGCCGGGGAGTGTCGGGAA
GCGGTGTGGTCCCAAAAGATCACCTGGCCAGGCGACGGGCGGGACTCCAT
AACCGTCTACTGTGCCAAGCAGATCTACACACTCACCTTTACTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000244 | genome | Sc0000244:249268..252409 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95960_evm1 |
| Biotype | protein_coding |
|
