transcript:BL95983_evm0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL95983_evm0
Unique Nametranscript:BL95983_evm0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL95983_evm0

>transcript:BL95983_evm0-protein ID=transcript:BL95983_evm0-protein|Name=transcript:BL95983_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=140bp
MSRYFPTGTADEFSEHVFRTFDTNGDGVVDFREFLMAASATSKGTAEDKL
RWAFNMYDMDGDGCITRAEMVEILQSIHKMMTPQMRTALLTDNYSPQERT
DELFKLMDANKDDEININEFIRGAQRDKDLIAMLTQNVVQ
Run BLAST on NCBI

mRNA from alignment at Sc0000262:100895..102219-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL95983_evm0 ID=transcript:BL95983_evm0|Name=transcript:BL95983_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=1325bp|location=Sequence derived from alignment at Sc0000262:100895..102219- (Branchiostoma lanceolatum)
ATGAGCAGGTAGATGTTACAAGAAGTCCTGTTGAAAAACAGATAGCATAA ACCCTTTCCACTTGGAAGGCCCTTCGCTGTTTTCCCCTTAGAGCCTAATT TGTTCTATACACCATACTCTTTGAAACCTCAACATCCAGTCAACTGGATT TTACCGAATCAATTTTGTATCTGGGTCGGCGACTTAATGCCAGTTGATGA GATGATGGTATGAAGGGATAATCAATACGTGTCACTAAGCTACAGGAATG TGTCGTTTTGATCGATGTTAATTTTGGCTTGCTGTTTGTGACTATGAATG TCAGATACTCCGTGTGTGGCGAACATCAATTTATCTAAATCTAATAAAGG GTGAGTTTGATTTGTCAAAACAGCTTCAACTTAACGTATATTCATAATTT TTTGCGCAAGAGAAAAATCAGCCATTTTCTATAATATGTTTTGTTTTTAG GTACTTTCCAACAGGAACGGCTGACGAGTTCTCCGAGCACGTGTTCAGGA CGTTCGACACTAACGGGGACGGCGTGGTGGACTTCCGGGAGTTCCTGATG GCCGCCAGCGCCACGTCCAAGGGCACGGCAGAGGACAAGCTGAGATGGGC CTTCAACATGTACGACATGGACGGGGACGGCTGCATCACCAGGGCAGAGA TGGTGGAGATCTTACAGGTGGGTGGGCAAGGGGGGAGGCTGGACGTGGGG TGTTACCAGGACCGACGTGGTTAAGATACTACAGGCAAGGTTCAATATGA AGCCTAAATGCAGGTGTATAACCAGGACCAACATGGTCGAGTTACCAGAG GCACTAAATGTGTGGTCAATATGAACGCTAAAGGCAGGGGATGGAGGTAC ATATCTGTATCCATATCGTTAGAAGCAAAATAGTTCTCATACTTCGGTTG GGTATCAATACCGGCACCTAACTATAAGGGGTAAATGTAAGGCTCTTATC ATAACTGCATGTTGTCTCAAAATATAGTTATGACGATAGAATTAATTGAA ATAACGGTTTGTTGTTATTGAGAACTTTATTATTGTTATTGCCAGCGACA GAGTTGGTTCGTAATGAAAACGTTGTATGTTCCATGATCTTCCATTAACC AGAAGAAAATCCATCCCCTCATATCAGTCCATCCACAAGATGATGACGCC CCAGATGAGGACAGCGCTGCTGACAGACAATTACTCCCCACAAGAACGGA CGGACGAACTCTTCAAACTTATGGACGCCAACAAGGACGACGAGATCAAC ATCAACGAGTTCATCAGGGGGGCCCAGCGGGACAAGGACCTCATCGCCAT GTTAACGCAAAACGTCGTGCAGTAG

Coding sequence (CDS) from alignment at Sc0000262:100895..102219-

>transcript:BL95983_evm0 ID=transcript:BL95983_evm0|Name=transcript:BL95983_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=423bp|location=Sequence derived from alignment at Sc0000262:100895..102219- (Branchiostoma lanceolatum)
ATGAGCAGGTACTTTCCAACAGGAACGGCTGACGAGTTCTCCGAGCACGT
GTTCAGGACGTTCGACACTAACGGGGACGGCGTGGTGGACTTCCGGGAGT
TCCTGATGGCCGCCAGCGCCACGTCCAAGGGCACGGCAGAGGACAAGCTG
AGATGGGCCTTCAACATGTACGACATGGACGGGGACGGCTGCATCACCAG
GGCAGAGATGGTGGAGATCTTACAGTCCATCCACAAGATGATGACGCCCC
AGATGAGGACAGCGCTGCTGACAGACAATTACTCCCCACAAGAACGGACG
GACGAACTCTTCAAACTTATGGACGCCAACAAGGACGACGAGATCAACAT
CAACGAGTTCATCAGGGGGGCCCAGCGGGACAAGGACCTCATCGCCATGT
TAACGCAAAACGTCGTGCAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL95983gene:BL95983Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL95983_evm0-E1BL95983_evm0-E1-1564476830-413576Branchiostoma lanceolatumexon
BL95983_evm0-E2BL95983_evm0-E2-1564476830-413574Branchiostoma lanceolatumexon
BL95983_evm0-E3BL95983_evm0-E3-1564476830-413572Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL95983_evm0transcript:BL95983_evm0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000262genomeSc0000262:100895..102219 -
Properties
Property NameValue
Transcript idBL95983_evm0
Biotypeprotein_coding