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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96012_evm1 >transcript:BL96012_evm1-protein ID=transcript:BL96012_evm1-protein|Name=transcript:BL96012_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=366bp
MGCNWSKFKVKPAEAEVAPQTLYKTSHASSYHLMPIPVFLRFFFHLAFFS
PYEATTPRIVIGTDEATTSPRIVVGTDEATTSPRIVVGTDEATTPRIVVG
TDEATTPQIVVGTDEATTPQIVVGTDEAATPQIVVGTDEATTPRNVVGTD
EATTPRIAGGEDPSSHISKAIDPIAVEDQATEQPRPLMVVHQPSLRHKQS
TFFKKPSAKRLLEERISSLGYERDRVPGDGNCFFWAASRQLCRGEPRVAT
TAQMLRQDLVEYIQSHAEFYIPFLVGGPQAFWRQLKRLSVEGQWSSDLAD
ALPHALANFTSRRVTLITSKPNQPTISIEPDGGNESGTPVVLSYFARRGT
EHYDAVIRKRCEDNVI Run BLAST on NCBI mRNA from alignment at Sc0000297:190403..192093- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96012_evm1 ID=transcript:BL96012_evm1|Name=transcript:BL96012_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=1691bp|location=Sequence derived from alignment at Sc0000297:190403..192093- (Branchiostoma lanceolatum)
ATGGGTTGTAATTGGTCAAAATTTAAGGTTAAGCCAGCGGAAGCAGAGGT
CGCTCCTCAAACCCTGTACAAAACCAGGTAAGCGGGTTTCAGACTGAACA
ACATGACAGCAAAGTTTTCAAAACTGTTACATTGTCACCTTGGTAGATGT
GCAGTTATGTCAAGTTGGATTCATAGTACCATATGAATGTTTGACTTAGA
TTTAGGATCTGCTTTGTTGATTCAGTGTTCCTGGAAAACATCTAGGCGTT
AGTTTCTGTGTAGAAAAATTGCAATTTTATATCAGTATGATCGTAAAGAC
TATCAAATGAGAAACAAGTCCGCACGAGGAGGGCGATAAGCAAAACATAT
AGCGCCGAAAGAAAAACATGACGACGGGGTTGGTCACAGTTTACAACTGT
TGTTGCACGTGATCTTTAACCAGACATAAGATATCATTTAGTTATGTTTC
ATGATTCCATAATCGAATTAATTGCACCTATCAAACAGTCATGCATCGTC
GTATCATCTGATGCCGATTCCTGTCTTTCTCCGTTTCTTCTTCCACCTCG
CATTCTTCTCTCCGTGTATGTAGGAAAACAAAACCGTAATGACAGTCTTT
TCTCTGAATGCAGGTTAGCTACCCGGGCAAAAAAGCAGGCTAGGAAACTT
CAAACAAAAATTGTCAAATGTTTCCAAAAAAGGTCCAATAGAGTTGCCCC
TTACATAGCCGAGGTAACGACTTCGCAAATTGTGGTTGGCACAGACGAGG
CAACGACCCCGCGAATTGTGATTGGCACAGACGAGGCAACGACGTCCCCG
CGAATTGTGGTCGGCACAGACGAGGCAACGACGTCCCCGCGAATTGTGGT
CGGCACAGACGAGGCAACGACCCCGCGCATTGTGGTTGGCACAGACGAGG
CAACGACCCCGCAAATTGTGGTTGGCACAGACGAGGCAACTACCCCGCAA
ATTGTGGTTGGCACAGACGAGGCAGCTACCCCGCAAATTGTGGTTGGCAC
AGACGAGGCAACTACCCCGCGAAATGTGGTTGGCACAGACGAGGCAACGA
CCCCGCGAATTGCGGGTGGTGAGGATCCATCTTCCCACATATCTAAGGCA
ATAGATCCTATAGCGGTTGAAGACCAGGCAACCGAGCAACCCAGACCTCT
CATGGTCGTCCACCAGCCCTCCCTCCGTCACAAGCAGTCTACATTCTTCA
AGAAGCCGAGCGCCAAACGTCTTCTGGAGGAGCGGATCTCAAGTCTAGGT
TACGAGCGGGACCGGGTGCCTGGAGACGGTAACTGCTTCTTTTGGGCAGC
CTCTAGACAACTCTGTAGAGGAGAGCCACGGGTCGCCACCACAGCACAGA
TGCTGCGACAAGATCTGGTGGAGTACATCCAGTCCCATGCCGAGTTCTAC
ATCCCCTTCCTCGTAGGCGGCCCACAGGCGTTCTGGCGGCAGCTGAAGAG
GTTGTCCGTGGAGGGCCAATGGTCCTCGGACTTGGCCGATGCCTTGCCGC
ATGCCCTGGCGAACTTCACGTCAAGGAGAGTCACCCTCATCACGAGTAAA
CCCAACCAGCCGACCATTTCTATTGAACCTGACGGCGGCAACGAGTCCGG
TACTCCTGTGGTACTGTCATACTTCGCCAGGCGGGGTACGGAGCATTACG
ATGCTGTCATCAGGAAGAGGTGCGAGGATAACGTTATATAG Coding sequence (CDS) from alignment at Sc0000297:190403..192093- >transcript:BL96012_evm1 ID=transcript:BL96012_evm1|Name=transcript:BL96012_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=3303bp|location=Sequence derived from alignment at Sc0000297:190403..192093- (Branchiostoma lanceolatum)
ATGGGTTGTAATTGGTCAAAATTTAAGGTTAAGCCAGCGGAAGCAGAGGT
CGCTCCTCAAACCCTGTACAAAACCAGTCATGCATCGTCGTATCATCTGA
TGCCGATTCCTGTCTTTCTCCGTTTCTTCTTCCACCTCGCATTCTTCTCT
CCGTACGAGGCAACGACCCCGCGAATTGTGATTGGCACAGACGAGGCAAC
GACGTCCCCGCGAATTGTGGTCGGCACAGACGAGGCAACGACGTCCCCGC
GAATTGTGGTCGGCACAGACGAGGCAACGACCCCGCGCATTGTGGTTGGC
ACAGACGAGGCAACGACCCCGCAAATTGTGGTTGGCACAGACGAGGCAAC
TACCCCGCAAATTGTGGTTGGCACAGACGAGGCAGCTACCCCGCAAATTG
TGGTTGGCACAGACGAGGCAACTACCCCGCGAAATGTGGTTGGCACAGAC
GAGGCAACGACCCCGCGAATTGCGGGTGGTGAGGATCCATCTTCCCACAT
ATCTAAGGCAATAGATCCTATAGCGGTTGAAGACCAGGCAACCGAGCAAC
CCAGACCTCTCATGGTCGTCCACCAGCCCTCCCTCCGTCACAAGCAGTCT
ACATTCTTCAAGAAGCCGAGCGCCAAACGTCTTCTGGAGGAGCGGATCTC
AAGTCTAGGTTACGAGCGGGACCGGGTGCCTGGAGACGGTAACTGCTTCT
TTTGGGCAGCCTCTAGACAACTCTGTAGAGGAGAGCCACGGGTCGCCACC
ACAGCACAGATGCTGCGACAAGATCTGGTGGAGTACATCCAGTCCCATGC
CGAGTTCTACATCCCCTTCCTCGTAGGCGGCCCACAGGCGTTCTGGCGGC
AGCTGAAGAGGTTGTCCGTGGAGGGCCAATGGTCCTCGGACTTGGCCGAT
GCCTTGCCGCATGCCCTGGCGAACTTCACGTCAAGGAGAGTCACCCTCAT
CACGAGTAAACCCAACCAGCCGACCATTTCTATTGAACCTGACGGCGGCA
ACGAGTCCGGTACTCCTGTGGTACTGTCATACTTCGCCAGGCGGGGTACG
GAGCATTACGATGCTGTCATCAGGAAGAGGTGCGAGGATAACGTTATATA
GATGGGTTGTAATTGGTCAAAATTTAAGGTTAAGCCAGCGGAAGCAGAGG
TCGCTCCTCAAACCCTGTACAAAACCAGTCATGCATCGTCGTATCATCTG
ATGCCGATTCCTGTCTTTCTCCGTTTCTTCTTCCACCTCGCATTCTTCTC
TCCGTACGAGGCAACGACCCCGCGAATTGTGATTGGCACAGACGAGGCAA
CGACGTCCCCGCGAATTGTGGTCGGCACAGACGAGGCAACGACGTCCCCG
CGAATTGTGGTCGGCACAGACGAGGCAACGACCCCGCGCATTGTGGTTGG
CACAGACGAGGCAACGACCCCGCAAATTGTGGTTGGCACAGACGAGGCAA
CTACCCCGCAAATTGTGGTTGGCACAGACGAGGCAGCTACCCCGCAAATT
GTGGTTGGCACAGACGAGGCAACTACCCCGCGAAATGTGGTTGGCACAGA
CGAGGCAACGACCCCGCGAATTGCGGGTGGTGAGGATCCATCTTCCCACA
TATCTAAGGCAATAGATCCTATAGCGGTTGAAGACCAGGCAACCGAGCAA
CCCAGACCTCTCATGGTCGTCCACCAGCCCTCCCTCCGTCACAAGCAGTC
TACATTCTTCAAGAAGCCGAGCGCCAAACGTCTTCTGGAGGAGCGGATCT
CAAGTCTAGGTTACGAGCGGGACCGGGTGCCTGGAGACGGTAACTGCTTC
TTTTGGGCAGCCTCTAGACAACTCTGTAGAGGAGAGCCACGGGTCGCCAC
CACAGCACAGATGCTGCGACAAGATCTGGTGGAGTACATCCAGTCCCATG
CCGAGTTCTACATCCCCTTCCTCGTAGGCGGCCCACAGGCGTTCTGGCGG
CAGCTGAAGAGGTTGTCCGTGGAGGGCCAATGGTCCTCGGACTTGGCCGA
TGCCTTGCCGCATGCCCTGGCGAACTTCACGTCAAGGAGAGTCACCCTCA
TCACGAGTAAACCCAACCAGCCGACCATTTCTATTGAACCTGACGGCGGC
AACGAGTCCGGTACTCCTGTGGTACTGTCATACTTCGCCAGGCGGGGTAC
GGAGCATTACGATGCTGTCATCAGGAAGAGGTGCGAGGATAACGTTATAT
AGATGGGTTGTAATTGGTCAAAATTTAAGGTTAAGCCAGCGGAAGCAGAG
GTCGCTCCTCAAACCCTGTACAAAACCAGTCATGCATCGTCGTATCATCT
GATGCCGATTCCTGTCTTTCTCCGTTTCTTCTTCCACCTCGCATTCTTCT
CTCCGTACGAGGCAACGACCCCGCGAATTGTGATTGGCACAGACGAGGCA
ACGACGTCCCCGCGAATTGTGGTCGGCACAGACGAGGCAACGACGTCCCC
GCGAATTGTGGTCGGCACAGACGAGGCAACGACCCCGCGCATTGTGGTTG
GCACAGACGAGGCAACGACCCCGCAAATTGTGGTTGGCACAGACGAGGCA
ACTACCCCGCAAATTGTGGTTGGCACAGACGAGGCAGCTACCCCGCAAAT
TGTGGTTGGCACAGACGAGGCAACTACCCCGCGAAATGTGGTTGGCACAG
ACGAGGCAACGACCCCGCGAATTGCGGGTGGTGAGGATCCATCTTCCCAC
ATATCTAAGGCAATAGATCCTATAGCGGTTGAAGACCAGGCAACCGAGCA
ACCCAGACCTCTCATGGTCGTCCACCAGCCCTCCCTCCGTCACAAGCAGT
CTACATTCTTCAAGAAGCCGAGCGCCAAACGTCTTCTGGAGGAGCGGATC
TCAAGTCTAGGTTACGAGCGGGACCGGGTGCCTGGAGACGGTAACTGCTT
CTTTTGGGCAGCCTCTAGACAACTCTGTAGAGGAGAGCCACGGGTCGCCA
CCACAGCACAGATGCTGCGACAAGATCTGGTGGAGTACATCCAGTCCCAT
GCCGAGTTCTACATCCCCTTCCTCGTAGGCGGCCCACAGGCGTTCTGGCG
GCAGCTGAAGAGGTTGTCCGTGGAGGGCCAATGGTCCTCGGACTTGGCCG
ATGCCTTGCCGCATGCCCTGGCGAACTTCACGTCAAGGAGAGTCACCCTC
ATCACGAGTAAACCCAACCAGCCGACCATTTCTATTGAACCTGACGGCGG
CAACGAGTCCGGTACTCCTGTGGTACTGTCATACTTCGCCAGGCGGGGTA
CGGAGCATTACGATGCTGTCATCAGGAAGAGGTGCGAGGATAACGTTATA
TAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000297 | genome | Sc0000297:190403..192093 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96012_evm1 |
| Biotype | protein_coding |
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