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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96022_evm0 >transcript:BL96022_evm0-protein ID=transcript:BL96022_evm0-protein|Name=transcript:BL96022_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=425bp
MFTVFLLIIASTSSSDAQSICEHPANLTADSGQFYSPGYPGNYPVNTQCS
WRITVPEGKLVRISLLTFDLEDGSGCGYDSLVIHDGDSILDYRLLSACGS
NIPRSIVSSTNTVLVVFTSDGSITKAGFSAVFLSEDAPATCGPDEFTCTT
GSCVHVNASCDGVNDCGDNSDEYTCGQCGVTPIPPVFPANRIVGGSEAYP
GSWPWQVDVRRRGGHICGGALIHRQWVLSAAHCFQSKELSMYTFILGKYH
KFATGATEQVFSPTAIIKHSDYDWRTLDNDIALIKLATPATLTPYVQPVC
LPQAEPKAGQLTVATGWGYTQGTGGDDVLKQVLLPVVKTSKCNSTSMHDG
GITENMMCAGYEEGQQDTCDGDSGGPLVYPDYTDQTWRLTGLTSWGSVPC
AASMRPGVYTRVTRYLQWIQEKMAA Run BLAST on NCBI mRNA from alignment at Sc0000307:267016..271028+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96022_evm0 ID=transcript:BL96022_evm0|Name=transcript:BL96022_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4013bp|location=Sequence derived from alignment at Sc0000307:267016..271028+ (Branchiostoma lanceolatum)
ATGTTTACAGTATTTTTACTGATCATCGCATCGACCTCTTCATGTGAGTA
TAGATGTTTTATGCAATGTAAGACTAATTCAGTTGGTACAGTTTCATCAA
TATACAAGTCCAGTATTTTTTACCAAATATTCTGTGTATTTTCGTTGTAC
TTTTTTAACACCTAATATACAGTCTCCTCCAGCTTGTGTCGCATGATCAT
TCAGAAAAGACGCCTAGATTAAAAATGAATTTTAACTGTAGCGGATAGCA
TTAGTGGCATCAAAAGACAATAAACCAAAATAATGAAATCTTTCATATAA
AACCTGCGAGTTGGGTGAAAAAAAAGAAACCGAAAGGCTGGTTGGTTACA
AATGCCAAATCATTCCAACCACGTAATTTATAATGACGAAACGATGCCAA
TGTATCAGTGAATATTATCTCTTTACCGACAGTGTGCTGCCTAGCATTCT
CAAAAGCCTAAACGCACTTATAATTAGCTACTCTGCCCATATTCACAACA
GCATTTGTATCATTTTATGAAGATGATCTTAGACTGAGTAAAGCTGCAAT
CATCTCTATTCAGCTGATGCCCAGTCTATCTGTGAGCACCCCGCCAACCT
GACAGCCGACAGCGGCCAGTTCTACAGCCCAGGCTACCCCGGCAACTATC
CCGTCAACACACAGTGTTCGTGGAGGATAACTGTCCCGGAAGGGAAGCTT
GTGAGGATCTCCCTCTTGACCTTTGACCTAGAAGACGGCTCTGGGTGTGG
GTACGACTCCCTGGTTATCCATGACGGTGACAGCATACTTGACTACAGAC
TTCTGAGCGCCTGTGGAAGCAATGTGAGTTTGATAAAAGTCTACAACAAT
GAATTTTATTTAGCTGTGAAACGCAAGACTCTTTGCTTTAAAACTTGTCA
TTTTTGTACTAATCTGACATACATTCATAAATGACGGCACATTCAATGTC
ACAAGGAATAAGCTAAAATCTATTTGACTTTTCACCTCTAGATTCCGCGG
TCCATAGTTTCCTCAACAAACACTGTCCTCGTTGTGTTCACATCAGACGG
GTCCATCACCAAAGCCGGCTTTTCCGCCGTCTTTTTATCCGAAGATGCAC
CAGGTGAACAATCACCTACTTCAGTTTTCCTATCTCAAATGTTTTACGCC
GTCTGATTGAATCTGCATTTTTCTAAAAATTGTGACGTCCGGCGATGAAG
GCTAGACATCCAGGTAATAAGATACGCCAAAACACAGTTACCCAAGAAAC
TGGATAAACCTTTGAAACAGTCATACGTTTCAGACAGCATCCGCTATCTT
TCGTCAGTGAAAATTGTGACCTCTTCATGTACTTTGTTGCAGCAACCTGT
GGACCTGACGAATTCACCTGCACGACAGGTAGTTGTGTACACGTCAACGC
ATCATGTGACGGCGTCAACGACTGCGGAGATAATAGTGACGAGTACACAT
GTGGTATGTAACGTTACGTCACAACACTGTCAAAGATGCAACGTTGATTT
GATAATGCCAACTATTCATAATGGGTATTACAGTATGTACCATGTCCGTC
TCAGCTTAAGAAGCTCTTCCCCATTTACTGCACATTCCAGTATTTTCTAT
ACGATGGGCCGCAATCTTAAAAAGAGAATAGTACAACATCGTTTGAACAA
ATACGTGTCTTGCCAAATAGACTGTTCCCATGTAACGTTACATAAACGTT
ACGACAACGCGATCTTCATGAGGTAAACAAATGTGTGATTGATGGGCTTC
AGTTGAAATTGTAATCGCAAGTTGTCCATCAAAAGAACATCATGATCACT
TCAAAATGCAACATTTCTCTTCCTCACCACGTGAAGGCCAGTGCGGTGTG
ACGCCCATCCCGCCCGTGTTTCCCGCCAACCGGATCGTGGGCGGGTCGGA
GGCCTACCCGGGCAGCTGGCCCTGGCAGGTGGACGTGCGGCGCCGAGGAG
GGCACATCTGTGGAGGCGCCTTGATCCACAGGCAGTGGGTGCTGAGTGCC
GCGCATTGTTTCCAAAGGTAAGTACATGTACTATAAAGATACGTTAAGTT
AAACTTAAACCTCACACAGCTGAAAGCAGATATTGAGGTTAGAAATCGTA
ACGCCTCTCCAACAGCTAACGTTACCCACAGAAAACCAATCAAAAATGTT
ACAATCTTTCACCACAAGATTTGGTTGGCGATTTGAAAGAACAATTGCAA
TACACTGCCTCCTGCCGTTCCTAAAACAGCTTTCTTTTTATGTATGTTGT
GGAGCTGAATTTTCTTTTCTCTTCCTACCTTCAGCAAAGAGCTGAGCATG
TACACCTTCATCCTGGGGAAGTATCACAAATTCGCCACGGGTGCCACGGA
GCAGGTCTTTAGTCCGACCGCCATCATCAAACACTCCGACTATGATGTAC
GTTGTTGTAAAATAATTATGACAAAAACGTATCATTTTCATGTTGTTGCG
CCTTTATTTAATCTTGAAAAACTCACATATGAATGATAGTGGAGACATAC
TTGTAGCCACTGTGTTCTTTGATTCTCTTTTGACACAGAATCAAAGAACA
AGGAACCTTCGGCAACGTTAACTGATGATAGTGATGTGATTATCATTAAG
ATGGGTACAAAATGACAGATATCTGCCTCTAACGTTACATACCGTGTACT
TACCTATTTTCAGTGGCGCACTTTAGACAACGACATCGCGTTGATCAAGT
TGGCCACCCCGGCCACCCTGACGCCGTACGTGCAGCCCGTCTGTCTCCCT
CAGGCCGAACCCAAGGCCGGGCAGCTCACCGTGGCCACGGGATGGGGATA
CACACAGGGTAGGGTTGGAATGTGGCGGGATTCCGGACCGCAGTACTAGT
ATCTTACATATCATGGTATTTGTTGTCAATGGGCCTTCCTAGTGCCATAT
CTATTCGGCTCAACATTGGCAATTGGGTCGGCCATCGATTCCACGGTGTT
ATCCATGCATGATAATCCAGGGTTGTCTTCTTCGACATCAATATTATTTT
TTCTTTGCACGTGTACTCAGAATCCGGAGGACAATTTTGGATGGGGCAAT
CGATATGCATAGTCTGAAGTACGAGAGATGTCTCTGAATGATTACGTTGG
TAAGAGAATGATGATCAACAATTATCCTCTGAAAACTGATACTTACAACC
TGTATATCTACATTTGCCGTTTGCAGGTACGGGTGGGGATGACGTGTTGA
AGCAGGTTCTGCTGCCGGTAGTGAAGACCAGTAAGTGTAACTCCACATCC
ATGCACGACGGCGGCATCACGGAGAACATGATGTGTGCCGGGTACGAGGA
GGGGCAGCAGGACACATGTGATGTAAGGATCAACTACGTTTCTAGTCCTC
CTAAGAGTAAGACTGCGAAAACTTGAATAGTAGATATTGGCCGATTCCTC
TGTAAACTATTTTTTTACTCCGTTATGCCAATGGTCCTTTTTTTAGCCCA
AACTCAACATTTGACATAATATGCCATTGGAGATTATTGGTGCTTATCAC
AAAGACTGCTATCTGGATGTCATCTTGTAAATCAACGCAAATATTACGTA
AGAGCCAAACATAGGGCATATCCAACAGACAGCGCAGTTTAACCTGGCCA
CTTTTTGGTGGTCCCTTAATTTTTCTTTTTCATTGACCTAAGTATTTAGT
TTAAGAATCCTTTCAAAAGTAGCCACCTGTCTATAGGGACCATTTTCTTC
ACGCCAAGTCCCTTGAGTAGTCACTGACTATAAAGATTTTGAATTAGTGG
TCGCTAAAGACAGGTTTGACTGTACAGTGCTTTCTAGGCTGTGCTTTCTG
CAGATGAATTTGTCAGCGTCTACGCTGTGTTGACATTTGTTCCAGGGAGA
CAGTGGCGGACCTCTCGTGTACCCTGACTACACCGATCAAACATGGCGGC
TGACCGGGCTCACCAGCTGGGGTAGCGTGCCGTGTGCAGCGAGCATGCGC
CCTGGCGTGTACACGCGCGTCACCAGGTACCTCCAGTGGATACAGGAGAA
AATGGCGGCTTAA Coding sequence (CDS) from alignment at Sc0000307:267016..271028+ >transcript:BL96022_evm0 ID=transcript:BL96022_evm0|Name=transcript:BL96022_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1278bp|location=Sequence derived from alignment at Sc0000307:267016..271028+ (Branchiostoma lanceolatum)
ATGTTTACAGTATTTTTACTGATCATCGCATCGACCTCTTCATCTGATGC
CCAGTCTATCTGTGAGCACCCCGCCAACCTGACAGCCGACAGCGGCCAGT
TCTACAGCCCAGGCTACCCCGGCAACTATCCCGTCAACACACAGTGTTCG
TGGAGGATAACTGTCCCGGAAGGGAAGCTTGTGAGGATCTCCCTCTTGAC
CTTTGACCTAGAAGACGGCTCTGGGTGTGGGTACGACTCCCTGGTTATCC
ATGACGGTGACAGCATACTTGACTACAGACTTCTGAGCGCCTGTGGAAGC
AATATTCCGCGGTCCATAGTTTCCTCAACAAACACTGTCCTCGTTGTGTT
CACATCAGACGGGTCCATCACCAAAGCCGGCTTTTCCGCCGTCTTTTTAT
CCGAAGATGCACCAGCAACCTGTGGACCTGACGAATTCACCTGCACGACA
GGTAGTTGTGTACACGTCAACGCATCATGTGACGGCGTCAACGACTGCGG
AGATAATAGTGACGAGTACACATGTGGCCAGTGCGGTGTGACGCCCATCC
CGCCCGTGTTTCCCGCCAACCGGATCGTGGGCGGGTCGGAGGCCTACCCG
GGCAGCTGGCCCTGGCAGGTGGACGTGCGGCGCCGAGGAGGGCACATCTG
TGGAGGCGCCTTGATCCACAGGCAGTGGGTGCTGAGTGCCGCGCATTGTT
TCCAAAGCAAAGAGCTGAGCATGTACACCTTCATCCTGGGGAAGTATCAC
AAATTCGCCACGGGTGCCACGGAGCAGGTCTTTAGTCCGACCGCCATCAT
CAAACACTCCGACTATGATTGGCGCACTTTAGACAACGACATCGCGTTGA
TCAAGTTGGCCACCCCGGCCACCCTGACGCCGTACGTGCAGCCCGTCTGT
CTCCCTCAGGCCGAACCCAAGGCCGGGCAGCTCACCGTGGCCACGGGATG
GGGATACACACAGGGTACGGGTGGGGATGACGTGTTGAAGCAGGTTCTGC
TGCCGGTAGTGAAGACCAGTAAGTGTAACTCCACATCCATGCACGACGGC
GGCATCACGGAGAACATGATGTGTGCCGGGTACGAGGAGGGGCAGCAGGA
CACATGTGATGGAGACAGTGGCGGACCTCTCGTGTACCCTGACTACACCG
ATCAAACATGGCGGCTGACCGGGCTCACCAGCTGGGGTAGCGTGCCGTGT
GCAGCGAGCATGCGCCCTGGCGTGTACACGCGCGTCACCAGGTACCTCCA
GTGGATACAGGAGAAAATGGCGGCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000307 | genome | Sc0000307:267016..271028 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96022_evm0 |
| Biotype | protein_coding |
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