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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96030_evm1 >transcript:BL96030_evm1-protein ID=transcript:BL96030_evm1-protein|Name=transcript:BL96030_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=550bp
MKPSVLSLLAGLVTLTIVYAYVDEYTDTLTGCECWFDSSRWDCACCRPGG
CQCDASQPHRCIPCGGDCDDYPDFPWAIDNGGDNHLTSSCDQCVTMFQST
SIPAGFVTKTYRSSDDDLTNPERGWWKYASTEASHFHVLTASQLRRYRSE
GHTLIFRYYVLDLFVHSDISAAFLTNLQADLDNARQAGVKIIPRFCYTET
SDDSDDASLSQALRHLNQLKPYLQANGDVIAVVQAGFIGTWGEWYYSDSF
STQDSDGDPVLVTDNDWAKRRTLMDAILDAVPNDRMVQLRTMKYKRRLTD
DDSPLTEPEAHSGSKKARIGHHNDCFLASDRDWGTFENFAVDYAYLSTDT
TYTVMGGETCNYNPPRSSCAKAEEELSLFHWSYLNPSYHPDATGEWKQQG
CFDRIGRHLGYRLELVSGTYRSAVPQGGTFCGRLEIRNVGYAAPFNPRQV
RIVLQKDSNIVTSLVVTGVDPRDWHPGTLHSVPISVQLPSNVASGSYQVF
LWLSDPSPTISDRPEFSILLANTGVPDPLTGLNNLGHTLQVQPSSSASCR Run BLAST on NCBI mRNA from alignment at Sc0000324:138152..144357+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96030_evm1 ID=transcript:BL96030_evm1|Name=transcript:BL96030_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=6206bp|location=Sequence derived from alignment at Sc0000324:138152..144357+ (Branchiostoma lanceolatum)
ATGAAACCTTCCGTGTTGTCTCTGTTAGCCGGGCTGGTCACATTGACCAT
CGTGTATGCATATGGTGAGTAAAATAGTTTCATATTCTCTGGAACATATG
TTCTCGATGATTTGTATCCTGAAAACAACCCCGAGTCTTGTTTTATCAAA
CATGAATTCAAAGATATAGGAATGTAGAGTTTGATTAGTCAGCGAGGAGA
AATCTTGTCACATTATTACAAAAGTAATACGACTGTGTCCAGTTGTTAAG
TCTCGACAGTGAAAACTAATCCTAGGCCTGTTAAATCATTGCAAACATAA
TCGTGTTATGTGTATGTGTAGTTGACGAGTACACGGACACGCTGACGGGT
TGCGAGTGCTGGTTCGACAGTTCCCGGTGGGACTGTGCCTGCTGCCGCCC
GGGCGGGTGCCAGTGCGATGCCTCCCAACCACACCGCTGTATCCCGTGCG
GTGGCGACTGTGACGACTATCCCGACTGTAGGTTCAACGTTTTCTTCTGC
TCTCCTCGTTTGAAAGTTATATACGTGATATTTTGGGAATATTTTCAAGT
TGTTTACTTCACTAAGGCATCAGTTCAACTGCTAAAATATGCCCGACTCG
GTATATACCGGTACTACTACTAGTGGTTGCTTTTGAGTTGATAATTTTGC
AACCATGAATTTGCATAAGTTAAATGCATGTTCCATACCTAATACAGTAC
AGCGTTTTCAACCGTAGGTTCTCATTAGACAGTAATCATTCAAATTCACG
ATTAGATCGCATCACCGTGTCATAGGTCAACGTTCATACGGAACGTTCAC
ATGGAACAATGAGGTTAGACAGTCTTAGCATGAAATGAAGCCATTGGAGT
TCCTTTCAACATCATATAACATCATAGATATCATCAAAAGTCAGAGACGG
ATTTTAATTCTTTCAGTGCTAGAAAACGAGGGTATTTCCGCTTCCGTTCG
GTAGTCCTTCTATGTGAGGGACGATCTCAGAATGATAGCGGAAGCATGTA
CCTGGGGACGGGTGGGGGGTTTAACGTTCATATGACGCACCCACGATGTG
TGTCCGTACCTTAACCTTGAAAGATCAACTGAACCAGACACATACACATG
TTACAGATGTTCTGACTCCCACCAATTTCTAAATCCGTAACATATCATAA
CAAGCTTGAGGTCATATTGATAACCCGCAAAGTAGATATGCCACCTATTC
TTCTCGTCGTACAAAACAACTTGTACTGGAGAAATGAGAGGTTCTATGTA
TATCTTTTTTACCAAAGAGGCAGTAGCTTCAACTTCAAGGAGGAGCATAG
GGAATTCTGAGTAAGGGTACCGGTAAATCTTGATCAACTTGGAGGCTCTC
AAGTGGTTTTGATGGTTTGAAAAATAGCGACTCAATAAAGATGGTAAAAC
TTAAACAAATAACGTGTGTGTTCTTACAAATAACACCAAAAGCCTCCATA
TGACAATATAAACCTACACCTAAGAGATCAAAAAAATTGTCAATGGTCAA
ACTTTTAATTTCATGAAGGTATTTACGAAGAAGATGATGTAAAAAAAAAA
TTGTTTTCCCTCCTCCTACAGTCCCCTGGGCCATAGACAATGGTGGGGAT
AATCACCTGACCAGTTCGTGTGACCAGTGCGTGACCATGTTCCAGTCCAC
ATCCATACCAGCTGGGTACGTATATAATCTCCAAGCAGATGTGGAAAAGC
CGGCTGCTCCGTCGAACCAGGAGCTTGAAATCCCGTTGATTTTGAGATCA
GTGCTTGGAAATTAGTATGTATGTATTTTTGCCTTACTTGTAACCGCCAC
CATGGTTGGCCAGGAAGAAGGTGACGTCATTGTCGTGAGCCGGAAGTAGT
CCATGTGTCCAGTGTGTGATGGTTAGGCCATGTTGATGAAAACTAAACAC
ATGGTATGGTATTCCGAAATATAGGTTCTTCATTTTTGTTCTTTCAAATC
TTGCTCTTTGACTTTGGAATTGACTTCGGCATTCTACGACATTGTTATCC
GTTTTCCAAAATCCTTCTTTGGGTGCAATTTACAGCATGTATTTTGTCAT
TTTGCAGCTGTTCTTCACGATTTACAATATGTCCAGAACTTTTTTTTTTG
AAACGGACGAAAATTGATCATGCCATCCATATAATCAAGTCAACATGGCC
TTATTGGTAAACAATTGATATAAAACGTTACAGACAGACGATAAGGTAGG
CCTGGTCCTGATAAAATGAACCGAGAACTGAACTAGAGAAAATAGGATTT
TAGAGCTCGCAATGTCACAAGTGTGAGCTCTGAGCACATAGCAAACTATA
CAGATGCTGTGCAGAGTAAATGTGTTACAAGTCATACCTGTTGTTGTCTT
TCAGATTCGTCACCAAAACCTACAGGTCCTCCGATGACGACCTGACCAAC
CCTGAGCGAGGCTGGTGGAAATACGCTTCTACTGAAGCCTCACACTTCCA
CGTCCTAACGGTTAGGTTTCAGTCCTGCGCAGTACCTTGGTTATCAGCAT
CTTTTTAATATTTGAAGATATTCAGAGAAAGCTGTGGATTTGTAAGCGTG
TGTATAAGACAAAATGCTTTCCTTGTTTTCTGATTGTAAACATGCCTTAA
CACAGACATTGATTTCAGACGGGTAGTTACATGTAAAATGGTCTTGAGAC
TTGAAAATGATTTCCAGTCATTGTCAAATGGGATTCCTTTTGCGGAAAAT
GAAATCGACAAAAAACATGGCGACCAAGAATAGATGGTGGAACTAGAATG
ACTAGAAACAGTGGTTTCTAATACTGAGCATGAAATAACCTATTTGCCTG
TTGTTCATACTCGCATAGGATTTAAAGAATATATATGATATGTGTACCTA
GAAATATTTTGTACCGTCAGGCCTCTCAGCTAAGGAGGTACAGGAGTGAG
GGCCACACGCTCATCTTCCGGTACTACGTCCTGGACCTGTTCGTGCACTC
GGACATCAGCGCCGCCTTCCTGACCAACCTGCAGGCGGACCTGGATAACG
CTCGGCAGGCGGGAGTGAAGATCATCCCCCGCTTCTGCTACACCGAGACT
TCGGTTCGTATTTCTTGACTTTGTTTGATTTTTTGATCGCCTCAACGCGT
AACATGCCAGTTTTGTACAGGAGGACTGATAAGCAATGTTAGGTTTGATC
CACTCACACCGGGGCGCACCGCTACTACGTGGAGTTCTTTTATGCTGGGG
ATGTCCTCAGACACAGGACCTCCGGTTATACGTACCTCCGACTGTTACCA
GTTTCAGTCGTGTCGATAGAGCAACAACGGTCGGGACTCGAACTCCTGAC
CTCCAGGTCCAGACATAGGGTTTCTCATCAGTAGCCCTTAACACCAAGCT
ACTTCCATGTGCCTGTTCTAAACTCGAAACAGACATGACATCTCTCAATC
CCCGTGTTTCAGGATGACTCTGATGACGCCTCCCTGTCCCAAGCATTACG
TCACCTGAATCAACTGAAGCCGTATCTCCAGGCCAACGGTGACGTCATCG
CAGTGGTGCAGGCGGGATTCATTGGAACATGGGGTAATATCAGGAAGAAT
TACACATAACGCCAACATGCACTAGCACGATGCAAAATACTTTCCAACCG
TAATAGAATGTTGTTTTGTGTGTAAGAATGGCCAGGGACCAAAGACATGA
GTAAACTACAATGCCACTTATGTACCCTACAGGAGAGTGGTATTACAGCG
ACAGTTTCAGCACCCAGGACAGTGACGGCGATCCTGTTTTGGTGACTGAT
AACGACTGGGCCAAGCGCAGGACCCTAATGGACGCCATCCTGGATGCAGT
TCCAAACGACAGGTTCATTTCTTTGTATCTGGCTGATTGAACTACTTAAA
GAGTTTTTGTCGCCTGTCTCACAGGAGTAAGGAAACATGTTGTGGTTTAA
ATGCATTGAAGCTAGTGTCGTTTTGCTAATTTTTCAACATTACAGCATAT
TTTTTCCATTATAGAATGGTCCAGTTGCGAACGATGAAGTACAAGAGGAG
GCTCACCGACGACGACTCCCCCTTGACTGAACCCGAGGCCCACTCAGGAT
CCAAGAAAGCACGCATCGGTAATTCATCCATTTTCCTTGAAATCCTATGG
CATAGATAAACTTTTCTCGCATTGGTGGGCCAGATTGTGAGTTGTTTATT
GTTTGATAGATGAGCTGTATTTCCTTATCATATTAAGAACGCTTGCCGCC
TGTCTTCCTTCAGGCCACCACAACGACTGTTTCCTGGCCAGTGACAGAGA
CTGGGGAACGTTCGAAAACTTCGCTGTGGACTATGCCTACCTGTCGACTG
ACACCACCTACACGGTCATGGGCGGAGAGACTTGCAACTACAACCCTCCA
CGGTAAGTATGACCGGTTTCTGTATACACTTTTTTGAATGGTTGTGGAGT
ATCACGCATGAGCTAATGCTTTCGCTGGCTTTAGAAATTCAAGAAGTATG
CTGAATGATTTCTTGATGAACCTGAATGTTTGGAATCGCAGGCCAGCAAC
AGTTAGTCAGGGACTGCTCCCAACTACAGCATTACTGTTAAGTTACTGGT
GCTGGTAGTGTTGCTCTCAACAATATTCCATGTCTTTTTACGAACAATAT
ATCCTTATTCTGCATGCACAGCTGAGACTCTGGCGTACAAAATGTAACAG
TTATCGGCGTTGCTCATTCATTGTCACGATCTAGGTCGTCTTGTGCCAAA
GCCGAGGAAGAGTTGTCTCTTTTTCACTGGTCCTATCTCAACCCATCCTA
CCATCCCGATGCCACAGGTGAATGGAAGCAGCAAGGCTGTTTTGACAGGT
ACATCAGAAGTCTGCTTCTCTAAGCTCTTTGCTCATTGCACAAAATTACT
TACTGTCTTCCATTCCAGCATAAGAATTGAACTCCAAACGTTGCACGCAT
AACTAGCTTTCCCTCCAACGCCTGTGAGCAAGTGCTACTATAGGGTATTG
ATGATGAGGCAATATGTAAGGATTTACTCAATTTGTTACCTTTACTAGGC
AAACTACAGACTTATATCTATGCTTGTATGGATGTAGAATGTGTTACTGT
CTAAAATTTTAATTATCGAAAAAAGTGTTCTTGTTTTTTTTTCCTTTTTA
AAGGATCGGGCGCCATCTTGGGTACCGGTTGGAGCTGGTATCCGGTACGT
ACCGGAGCGCGGTACCCCAGGGAGGGACGTTCTGCGGCAGACTGGAGATC
AGGAATGTCGGGTACGCCGCGCCCTTCAACCCGCGGCAGGTCAGAATCGT
CCTGCAGAAGGACAGGTGAGCGAAAAGCCTAATTTTTTCTCTCAATCAGA
AATTTAGAGATGTACATGTAGATATGAGTGCCGGAAGTTGTGATGTTTTT
GTTTGTTTTCCAGTAGAAAGTTGGTTTGTAAGCTGGCATTTTACTGTAAT
TTAATGGTATTGTTTCTTTGAACAGCAACATCGTGACGTCCCTCGTGGTG
ACAGGTGTAGACCCACGTGACTGGCATCCGGGTACTTTGCACTCTGTCCC
CATCTCGGTGCAGTTGCCTAGCAACGTGGCGTCAGGAAGTTACCAGGTAA
GGACAGACGTCCCCGGACATTTATTAGATCGTACGATTTACGAAAAATAG
CATTACATGTACTAATTAGATTTGATTGTTAGAATTTGATACATTTAATG
AAGGAATATGAAAATGTGACAAATGACTACTGTAACGTCGCAAGGTGTTC
CTGTGGCTGTCCGACCCCAGCCCGACCATCTCAGACCGCCCGGAGTTCAG
CATCCTCCTGGCCAACACCGGAGTACCGGACCCGCTCACCGGCCTTAACA
ACCTCGGACACACACTGCAGGTATAATTTTAGAATGCATGTATACATTGT
AGATGTTCTCACCAGATTTTTGCATCTATGCACAATATGTTTTTTAAGAA
AAAAAATTAATTATAAACAATTACGATGTAAAGGATCGATTGAAGAGGCC
TAGGACTGGAGGAGGAGGGTTATGGCCATCCGTGACATTCTCACGCCAAG
ATGATGATGATGTAGCTTTTAGTTTCAATCAGCTCCAATACTTACTACGG
GTTAAATATTCGTTCTAAAGGGTGCTTCATGTTGTGGTGTGCGGAGGGGG
GTCGTCATATATTACACACTCTTCAAATGCAAGGAATGTCCTTTGTTGAA
CACTTAATGTTTTGTTTCTGCAGGTGCAACCATCCAGCTCTGCCTCCTGC
CGATGA Coding sequence (CDS) from alignment at Sc0000324:138152..144357+ >transcript:BL96030_evm1 ID=transcript:BL96030_evm1|Name=transcript:BL96030_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1653bp|location=Sequence derived from alignment at Sc0000324:138152..144357+ (Branchiostoma lanceolatum)
ATGAAACCTTCCGTGTTGTCTCTGTTAGCCGGGCTGGTCACATTGACCAT
CGTGTATGCATATGTTGACGAGTACACGGACACGCTGACGGGTTGCGAGT
GCTGGTTCGACAGTTCCCGGTGGGACTGTGCCTGCTGCCGCCCGGGCGGG
TGCCAGTGCGATGCCTCCCAACCACACCGCTGTATCCCGTGCGGTGGCGA
CTGTGACGACTATCCCGACTTCCCCTGGGCCATAGACAATGGTGGGGATA
ATCACCTGACCAGTTCGTGTGACCAGTGCGTGACCATGTTCCAGTCCACA
TCCATACCAGCTGGATTCGTCACCAAAACCTACAGGTCCTCCGATGACGA
CCTGACCAACCCTGAGCGAGGCTGGTGGAAATACGCTTCTACTGAAGCCT
CACACTTCCACGTCCTAACGGCCTCTCAGCTAAGGAGGTACAGGAGTGAG
GGCCACACGCTCATCTTCCGGTACTACGTCCTGGACCTGTTCGTGCACTC
GGACATCAGCGCCGCCTTCCTGACCAACCTGCAGGCGGACCTGGATAACG
CTCGGCAGGCGGGAGTGAAGATCATCCCCCGCTTCTGCTACACCGAGACT
TCGGATGACTCTGATGACGCCTCCCTGTCCCAAGCATTACGTCACCTGAA
TCAACTGAAGCCGTATCTCCAGGCCAACGGTGACGTCATCGCAGTGGTGC
AGGCGGGATTCATTGGAACATGGGGAGAGTGGTATTACAGCGACAGTTTC
AGCACCCAGGACAGTGACGGCGATCCTGTTTTGGTGACTGATAACGACTG
GGCCAAGCGCAGGACCCTAATGGACGCCATCCTGGATGCAGTTCCAAACG
ACAGAATGGTCCAGTTGCGAACGATGAAGTACAAGAGGAGGCTCACCGAC
GACGACTCCCCCTTGACTGAACCCGAGGCCCACTCAGGATCCAAGAAAGC
ACGCATCGGCCACCACAACGACTGTTTCCTGGCCAGTGACAGAGACTGGG
GAACGTTCGAAAACTTCGCTGTGGACTATGCCTACCTGTCGACTGACACC
ACCTACACGGTCATGGGCGGAGAGACTTGCAACTACAACCCTCCACGGTC
GTCTTGTGCCAAAGCCGAGGAAGAGTTGTCTCTTTTTCACTGGTCCTATC
TCAACCCATCCTACCATCCCGATGCCACAGGTGAATGGAAGCAGCAAGGC
TGTTTTGACAGGATCGGGCGCCATCTTGGGTACCGGTTGGAGCTGGTATC
CGGTACGTACCGGAGCGCGGTACCCCAGGGAGGGACGTTCTGCGGCAGAC
TGGAGATCAGGAATGTCGGGTACGCCGCGCCCTTCAACCCGCGGCAGGTC
AGAATCGTCCTGCAGAAGGACAGCAACATCGTGACGTCCCTCGTGGTGAC
AGGTGTAGACCCACGTGACTGGCATCCGGGTACTTTGCACTCTGTCCCCA
TCTCGGTGCAGTTGCCTAGCAACGTGGCGTCAGGAAGTTACCAGGTGTTC
CTGTGGCTGTCCGACCCCAGCCCGACCATCTCAGACCGCCCGGAGTTCAG
CATCCTCCTGGCCAACACCGGAGTACCGGACCCGCTCACCGGCCTTAACA
ACCTCGGACACACACTGCAGGTGCAACCATCCAGCTCTGCCTCCTGCCGA
TGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000324 | genome | Sc0000324:138152..144357 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96030_evm1 |
| Biotype | protein_coding |
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