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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96031_evm0 >transcript:BL96031_evm0-protein ID=transcript:BL96031_evm0-protein|Name=transcript:BL96031_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=555bp
MKACIFLLVVGLVTLTTVYAYVDEYTDTLTGCECWFDSSRWDCACCRPGG
CQCWVPQPHRCIPCGTNCGDYPSFPWSIDNGVEHHAASSCHQCVWTVMTM
FQSISIPAGFVTKTYSPSDDDLTNPERGWWKYQAVKASDYIVLSVSRLQT
FRSEGHTLIFRYFVLDLFVNSDISAAFLTNLQADLDNARQAGVKIIPRFS
YTQTSGDSTDAPLSQALRHVAQLKPYLQANGDVIAVLQAGFIGTWGEWYY
SDNYSTLNSVGNPIVVTDDDWARRVTLLDAVLDAVPNDRMVQIRYMKYKK
RFTDDDSPLTESEGRSGSKKARIGHHNDCFLASDRDWGTFQDPTVDYPYL
SADTTYTVMGGETCNYNPPRSSCDTAERELALFHWSYLNPGFQQDVTNEW
KQQGCYDRIGRHLGYRLELVSGTYRSAVPQGGTFCGRLEIRNVGYAAPFN
PRQVKIVLQKDSVIVTSLVVTGVDPRDWHPGSLHSVPISVQLPSNLASGN
YQVFLWLSDPSPTISDRPEFSILLANTGVPDPLTGLNNLGHTLQVQPTGA
DSPSC Run BLAST on NCBI mRNA from alignment at Sc0000324:151804..157953+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96031_evm0 ID=transcript:BL96031_evm0|Name=transcript:BL96031_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=6150bp|location=Sequence derived from alignment at Sc0000324:151804..157953+ (Branchiostoma lanceolatum)
ATGAAGGCTTGCATATTTCTGTTGGTGGTCGGATTGGTCACCCTGACCAC
TGTGTACGCATATGGTGAGCAAAATTGAATATTTACTTTAACATATGTTA
CCATAGATCCCAATATCGATTCANTGGTCACCTTGACCACTGTGTACGCA
TATGGTGAGCAAAATTTAATATTTACTTTAACATATGTTACCATAGATCC
CAATATCGATTCAAACTGAATCGACTGTTGTATCGGTCATTTTAAATGCT
AAAGCCATTATCCAGAATATCTATTACATGCAGTCAAAATGTAACGTGCA
AAAAGGGGAATCTTGGAAACATCGTTATAGAAAATAACTGCATACTGGGT
TGTCTCTAGTTGACGAGTACACGGACACGCTGACGGGTTGCGAGTGCTGG
TTCGATAGTTCCCGGTGGGACTGTGCCTGCTGCCGCCCGGGCGGGTGCCA
GTGCTGGGTCCCTCAACCCCACCGGTGTATCCCGTGCGGCACCAACTGTG
GCGACTACCCCTCGTGTAGGTACAACTTCGTATCCTCCGGGATCTGGTGA
TTCGTGCTGTTTATGAATTTGTTTTCAACTAAGGATATTTATGAACATAC
ACCGATTATGATACATTCTATATAAACTCGTTGCTATATCTAGTTTATTT
CACATATGTTACGTATGTTACATGACGGTGGACAACCACGACATAAGGGA
CAGCAAATGCATAGCTAAACATTGATATCATCGCAGACAATCTAGGTACA
CAAAGCGTGTGTGTTTCATACCGCAGATGTTATGGCTCCCATAAATACCA
TCCAAAGTATAAATCACAACATGATTTAGGTCACCCTGCAATGTAAACAT
ACTTTTTGTTCCTCATCACCAGCAAGAACAAATTGTTAACATGTTGTTTT
AGAGGTAACAAATACTAACAGCATAAACGTCTACTTAATAAATAAGTATT
CATAGTAAAAGTTTTAAGAAAGAAGATAATAGAAAACATTATTAAATAGC
AAAGTAGCCCTATACCCTATCTATTCCCTGAAGAGCGTAGATAATTCCTT
ATGGCTGTATCATGAACTCATTAGCTGTTTCTCTATAGTCTAGAAGGTGT
TTCTTGTGCCCGTGCAGTCCCCTGGTCCATAGACAATGGTGTTGAGCACC
ACGCGGCCAGTTCGTGTCACCAGTGCGTGTGGACAGTCATGACCATGTTC
CAGTCCATCTCCATACCAGCTGGGTATGTAGACATGTTTTGAACTTGCTA
AAATGACAAATACAACCAAAAACGTCGTTTCTTTTATTTTCTAGAATCTT
TTTAAGGCAATTTATGAAGGATGGACAAGGACGGACAATCCCCTTTTTGT
TTTTCCATCTTCATGCTTGTTTTAATGCCATGTACCATATACATGTACAT
TGTATCTTCACACGAGACAGAAAAAAAGGTCGTGCCAAAACACGTAATAT
GTATACGTACATGTAATCTTAAAAACATATTTAATGGAAGACTCTCAAGA
GAACATAATCACAAATCCAAACAAAAACGTGTCTTGCAATGTTTTACAGA
TATTTCATGTTGTTTGTTTTCAGTTTCGTCACCAAAACCTACAGTCCTTC
CGATGACGACCTGACCAACCCTGAGCGCGGCTGGTGGAAATATCAGGCTG
TCAAAGCCTCGGATTACATCGTCCTATCGGTAATGAAAGTGATTTTGTGA
TCATTAGAATTTCCCTTTCTTAGAGGAATACAGCTACCTCTACCCGCGTT
GGCTGTCAGTTAGCGAGTGAAGTCTCGGCGTGTTTAATTAGCTAATTTGA
GCTGCACCCAAATATTCATAGTGAAGCACTACGGGTTCTTAGTAAAATGA
GGTGACTTTTATGGCCACGTGACCTTACAGACACGTGACCCCTTTAATGG
GTCAGTTGACAGGAAGTCTATACCGGCCCCCGTCTCTGTTACATGGTTAC
ATGGCTGAAGGGCCTGTAGGAAGCACGGTTAATCCAATACAGTTTTGTGT
TGGTTCCAAGATTCAATCGTTCACCAACACTAACGAAGATGTTAGTACTT
ACTTTTCATGCTAATTCAATATTGTCGCTAGGTCTCCCGGCTTCAGACGT
TCAGAAGTGAGGGCCACACACTCATCTTCCGGTACTTCGTCCTGGACCTG
TTCGTGAACTCGGACATCAGCGCCGCCTTCCTGACCAACCTGCAGGCGGA
CCTGGATAACGCTCGGCAGGCGGGAGTGAAGATCATCCCCCGCTTCAGCT
ACACACAGACATCGGTAGGTATTGGGTACTAGTTGAAAGTGTTACACGGT
TTTACACTCGACAAAATGAAAACAAGAAGCCATACCTCCGTGAAATATTT
AGAGTTTTAGTTCTAGAATCTCTTCTAATTCACCATTGTATATTTCTAGC
TAATTCTGTCTATGCAATTATCTGCTTACCTGTAGGACATTGGACCCGGG
CAGAGCCAAGCCTGCCGCACCAACTTGGACCTGGGCAAAATCAGCTTTCT
CAAATTCTCCAAGTCCCCAGTTGCACCATTTCCCGTCATCTTGGACCCGG
GCCAGCGGAAACAAACTTGCACACACACCAAGACAAAGAAACGAACGAAC
GAACGAACGAACGAACAAACAAACAAACAAACAAACAACCAAGCAAATAA
ACAGACCGAAAATAATATCTCCCTTTTCAATGTGGTTTTAGAAAATGATT
GATTTTTTCCATTCCCATGTAACGTTTCAGGGCGACTCTACTGACGCCCC
CTTGTCCCAAGCATTACGTCACGTGGCCCAACTAAAGCCGTACCTCCAGG
CCAACGGTGACGTCATCGCAGTGTTGCAGGCGGGCTTCATTGGAACATGG
GGTAGGGTATATCTTAAGTGAAGTTATATCAGACGTAAAATGTGTAATCA
TATACATACTGCCCCTTAACAATCATCGTGCAATAGCAGCTGAGCAGTTA
ATCTTGCTTGCTGCACAATCCCTATACTGCCATGTTCACATTTTCAAACC
GGGGCGGGCAGCTTGCGGAAACGAAAATTATGATATCAAACACTATAAAA
CACACAAAACGTCAAAAAATAGTCATGAGCATAATTGGCGTATATTTCTT
GATAACCACTTCAATTATTACTTACAGCAAACAACCCGACATTTTGGAAA
TGTGACCATAGTACAATATATGACGAAGATCAACTGCTAGAATATCATGG
GAGTCACCAATATCACGGGAGTCACCGGCCACTGTTTTGGAATTTTTACC
AACCGCAGTTCCATTGTTCTGTACCCTACAGGAGAGTGGTATTACAGCGA
CAACTACAGCACGCTGAACAGTGTGGGGAACCCCATCGTGGTGACAGATG
ACGACTGGGCCAGACGTGTCACACTGTTGGATGCGGTTTTGGATGCGGTT
CCAAACGACAGGTTGTACTTCACACTTAATGGTATAGCCCTGTTAGTATA
CGTAGACGATTACCCTCAGTGCCATCGGCCATTAAGAAGAGTGTCTATTA
GAAAAAGATTGATACCGTACGTGTTTTTCAAAACAACGTCAAAATAACCT
TAAGCACAGAAATGTTCTATTATATTGAAGGACTCCCCAATCATTATCTC
TAAGGAAAGATGTTGCGAAGTTTCAAAATGCCTGCATATGTTTGCCAGTA
CATATCTACAAAGCTATCCAAAATGATCGAAGTACTAGATAGATGATGGT
AGATATTCATATGGCTAAATCATATCTTTATACATGTATTTTTAGAATGG
TCCAGATACGATACATGAAGTACAAGAAGAGGTTCACCGACGACGACTCC
CCCCTGACCGAATCTGAGGGTCGCTCTGGATCCAAGAAAGCACGAATCGG
TATCTTATCACTTGTCTTTGACTTTGAGAATCGCATTTGTCTTCGCACTG
TTGTGGCAGATTGTCAGAGCTTTTCGGATTATCGCAATATCCTTATCATA
ATCCAGGCCACCACAATGACTGTTTCCTGGCCAGTGACAGAGACTGGGGA
ACGTTCCAGGACCCGACTGTGGACTATCCCTATCTGTCAGCTGACACCAC
CTACACGGTTATGGGCGGAGAGACCTGCAACTACAACCCTCCACGGTAAG
TGCGCGGTGCTTTTGTGGGAGTGACAGTAACAAATGCTTTTTTTCATTAA
TTGTTTGGAGAAAACAACAATTGTCCAAGGCTAGTGATTCGCGAAATTGA
TCCAGATTACACATTCTAATGTAGCTGATAATGTTTTTTTCCTTCATTAT
TAATTATGGCATGTATTGTTACGATCGGGATCCAGGTCGTCCTGTGACAC
AGCCGAGCGTGAGTTGGCGCTCTTCCACTGGTCCTACCTCAACCCCGGCT
TCCAGCAGGATGTCACAAACGAATGGAAGCAACAAGGCTGTTATGATAGG
TAGGCTGAAACTTTGAGCTCGCTTCTTTAGCGTAAATCAAATTGTTAGTC
CATCACTCGCTGTTCCCCTTCCACGATTTAAAGCAATCCACAGGCTACCA
ATGATGGGGCTAGCAGAGTTTAATGGGTGATTCATAGTTTGAATATGACT
GATATATTTGTCACCTTTTCACTATAACGCCTTGTAGGCATTGGTCAAAT
TAACGGGCAACAAAATATGCAATATCAAATATATGTATCCTCGAGACAAA
ATGAAAGACGATAATTTGAGCTCTATACATGTAGTAGCTGGCATTATCTA
GACGTGTTTGTCGATGAGGGTAAGGGGCGACTTTATCAAAGATGTAGCTG
TCGACTTGAACTCAGCATCATGACTGCACTGCGGATAGGTTTCACGTAAA
GGCGCTGCTACTTTTAAGCTGAACGGCATTAAACGCATGTACACCGTCAT
GCATAGAAAATAGAGATTTCAAAGTTATTTTTGCCATGCAGAATCGGGCG
CCATCTTGGGTACCGGTTGGAGCTGGTATCCGGTACGTACCGGAGTGCGG
TACCGCAGGGAGGGACGTTCTGCGGCAGACTGGAGATCAGGAATGTCGGG
TACGCCGCGCCCTTCAACCCGCGGCAGGTCAAAATCGTCCTGCAGAAGGA
CAGGTGAGCGAACAACGTTTTTTTAATTTATCATATCTAAAATATGTATA
TATAAAGATGAGAATGCCACTTTGTGGCGATTACTAACTGCGAAAATATT
CTCATTTTGCATCCGAATTGAGCGGTATTTTGGTGCTTTTCTCACATAAC
CAAGTGTAACTTTTAAGTTGTTTCTATGCATGTTTGTCTGAAATAAACGT
CAACTCCTTATCTTGCCTCTACCGTTCCCGTTGCAGTGTCATCGTGACGT
CATTGGTGGTGACAGGTGTAGACCCACGTGACTGGCATCCGGGTTCTTTG
CACTCTGTTCCCATCTCTGTGCAGTTGCCTAGCAACCTGGCGTCAGGAAA
CTATCAGGTGGGTGCAGACTTCGCCCTGTACTCAAAGTCAAATCCTATTT
ATACATTAAAAGATTATGACCAAAATAGCTCAAAAGTAATTAGTAACCNA
AAAGATTATGACCAAAATAGCTCAAAAGTAATTAGTAACCTGGCAACTTG
GCTGAAGCACCGTCCAACTCTTAGATATATAGTTACATATAGTTATACAT
ATAGAGAGATAGTAGTGATAGTAGTAGTAGTGGTAGTAGTAGTAGTAGTA
GTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGAAGTATT
TTCTGAGAGTATTCATGGAATAAAGAATGACTAGGATGTCGTAGAAAAAA
AATAAGAAAAATAATTGCCCCCATCGTTCTCCGTAGGTGTTCCTGTGGCT
GTCCGACCCCAGCCCGACCATCTCAGACCGGCCGGAGTTCAGCATCCTCC
TGGCGAACACCGGAGTACCGGACCCGCTCACCGGCCTCAACAACCTCGGA
CACACACTGCAGGTACTCAGCAACATTCAACCATTTTAACATGCATTTAT
ACATTGAAGATGTTGTCACCAGATTTTGGCATCTACACATGCATGTATGT
ACAATTCATGAAGGTGTTTCTCTAAAGTTCATATTGCACCATATAATTTT
GTTTTGATAGTCTTACAGTCTACCATCATATCAAAATAATGTTGTTGTTT
TTTTCATTTTGCAGGTGCAGCCGACTGGGGCCGACTCACCGTCTTGCTGA
Coding sequence (CDS) from alignment at Sc0000324:151804..157953+ >transcript:BL96031_evm0 ID=transcript:BL96031_evm0|Name=transcript:BL96031_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1668bp|location=Sequence derived from alignment at Sc0000324:151804..157953+ (Branchiostoma lanceolatum)
ATGAAGGCTTGCATATTTCTGTTGGTGGTCGGATTGGTCACCCTGACCAC
TGTGTACGCATATGTTGACGAGTACACGGACACGCTGACGGGTTGCGAGT
GCTGGTTCGATAGTTCCCGGTGGGACTGTGCCTGCTGCCGCCCGGGCGGG
TGCCAGTGCTGGGTCCCTCAACCCCACCGGTGTATCCCGTGCGGCACCAA
CTGTGGCGACTACCCCTCGTTCCCCTGGTCCATAGACAATGGTGTTGAGC
ACCACGCGGCCAGTTCGTGTCACCAGTGCGTGTGGACAGTCATGACCATG
TTCCAGTCCATCTCCATACCAGCTGGTTTCGTCACCAAAACCTACAGTCC
TTCCGATGACGACCTGACCAACCCTGAGCGCGGCTGGTGGAAATATCAGG
CTGTCAAAGCCTCGGATTACATCGTCCTATCGGTCTCCCGGCTTCAGACG
TTCAGAAGTGAGGGCCACACACTCATCTTCCGGTACTTCGTCCTGGACCT
GTTCGTGAACTCGGACATCAGCGCCGCCTTCCTGACCAACCTGCAGGCGG
ACCTGGATAACGCTCGGCAGGCGGGAGTGAAGATCATCCCCCGCTTCAGC
TACACACAGACATCGGGCGACTCTACTGACGCCCCCTTGTCCCAAGCATT
ACGTCACGTGGCCCAACTAAAGCCGTACCTCCAGGCCAACGGTGACGTCA
TCGCAGTGTTGCAGGCGGGCTTCATTGGAACATGGGGAGAGTGGTATTAC
AGCGACAACTACAGCACGCTGAACAGTGTGGGGAACCCCATCGTGGTGAC
AGATGACGACTGGGCCAGACGTGTCACACTGTTGGATGCGGTTTTGGATG
CGGTTCCAAACGACAGAATGGTCCAGATACGATACATGAAGTACAAGAAG
AGGTTCACCGACGACGACTCCCCCCTGACCGAATCTGAGGGTCGCTCTGG
ATCCAAGAAAGCACGAATCGGCCACCACAATGACTGTTTCCTGGCCAGTG
ACAGAGACTGGGGAACGTTCCAGGACCCGACTGTGGACTATCCCTATCTG
TCAGCTGACACCACCTACACGGTTATGGGCGGAGAGACCTGCAACTACAA
CCCTCCACGGTCGTCCTGTGACACAGCCGAGCGTGAGTTGGCGCTCTTCC
ACTGGTCCTACCTCAACCCCGGCTTCCAGCAGGATGTCACAAACGAATGG
AAGCAACAAGGCTGTTATGATAGAATCGGGCGCCATCTTGGGTACCGGTT
GGAGCTGGTATCCGGTACGTACCGGAGTGCGGTACCGCAGGGAGGGACGT
TCTGCGGCAGACTGGAGATCAGGAATGTCGGGTACGCCGCGCCCTTCAAC
CCGCGGCAGGTCAAAATCGTCCTGCAGAAGGACAGTGTCATCGTGACGTC
ATTGGTGGTGACAGGTGTAGACCCACGTGACTGGCATCCGGGTTCTTTGC
ACTCTGTTCCCATCTCTGTGCAGTTGCCTAGCAACCTGGCGTCAGGAAAC
TATCAGGTGTTCCTGTGGCTGTCCGACCCCAGCCCGACCATCTCAGACCG
GCCGGAGTTCAGCATCCTCCTGGCGAACACCGGAGTACCGGACCCGCTCA
CCGGCCTCAACAACCTCGGACACACACTGCAGGTGCAGCCGACTGGGGCC
GACTCACCGTCTTGCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000324 | genome | Sc0000324:151804..157953 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96031_evm0 |
| Biotype | protein_coding |
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