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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96033_evm2 >transcript:BL96033_evm2-protein ID=transcript:BL96033_evm2-protein|Name=transcript:BL96033_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=225bp
MLINSTDDGITWGQPRNITDHVGKDYATHPSPGYGIQKKHSPSKGRLVVC
GHGFHDGKGLVLLLSDDHGVTWRHGAFVPSVPFQDNTMGTFNPDECQPVE
LPDGSLYIVVRNQHQYKCHCKMVMRSFDGGETLPREHMFLDRALIEPRIT
SGLRYHNGVLFYSGPNRPLARSQRHFSSYVGASWLEEKDNIILPEKTCTY
DGATTTATHGLKAYRYGTIWLGTRL Run BLAST on NCBI mRNA from alignment at Sc0000327:244070..246562- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96033_evm2 ID=transcript:BL96033_evm2|Name=transcript:BL96033_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2493bp|location=Sequence derived from alignment at Sc0000327:244070..246562- (Branchiostoma lanceolatum)
ATGTTGATAAACAGTACGGATGACGGCATCACGTGGGGCCAGCCGAGAAA
TATAACCGACCACGTAGGAAAAGACTACGCCACACACCCAAGTCCAGGAT
ACGGCATTCAGGTAAGAGGCGTTGCTACTTCTGACTGACCAAAGCCACCG
ATGTCGCAATCACGTTAGGCATACATGTAAAATATTTCCTCTATTATTAT
TATGATCTGTAGCATTGCTCATGATAGCCTTTCATTGCAGTTATTTGAAG
ATGTGTTGATACTATTACTAAGATGAATGTATCACAGGGAACCTGAACAC
ATTGTTTATTCTTTACATTTCTATAGTAACCCTATTTCACAATAGAATGT
CAGTGTCAGTTTTAGGTAAGCATTTCAAAACAAATTTTCCCTCAGAAAAA
GCACAGCCCCTCAAAGGGAAGGCTGGTTGTATGCGGACACGGTTTCCACG
ACGGTAAAGGTTTGGTGCTGCTGCTGAGTGATGACCACGGCGTGACGTGG
AGACATGGGGCCTTCGTACCGAGTGTGCCGTTCCAGGATAACACCATGGG
GACATTTAACCCGGATGAATGCCAGGTATGTTCCTGGATGTAGTGTTGAA
GGCTGAATGGAACGTAGTGTGTTGACCTTCAAGTGCCAAGTTATTGTGCT
GAAATGTAATGCAATGCAAACGTATTCTGAAAGGTGTATAATGTGGCTTA
ATATGAACGCTCCAAATCGCATTTGAAATCGCCCGAAATCGCTTTCTGCG
AAACCACCTCCGGAGGTGGTTTACTCGCGATTTGCCTGCATTCCGACTTA
GTATGAACGCTCGAAATCGCCTTGTGTATAACTTGCAGATAGCTTCGTTG
ATAACAAATGCTCGATGACCTCTCACTACTTGCAACTGTATATAACCACA
AAATCAAATGGGACTAACGTAACAGTCTGGTGTAACTTACCTATATGTTC
GGGCAGATTGACCTTGAATGTCTTTGATGCTTTCTCTGTTACCGATGTTG
TTTTGTTCGTCACTGATGCCCCGGGGCACCGCCGCCATTTTGAATTTGAC
GCGTAACTTGGAACGATAAATCTGATTGGTTGTTTTAATTTTTCTCTCTG
ATTGGTTAGTCTGAAGCCGGACAAATTTTGCCGACTGCCCTCTAGCTTTT
AGATATATTCATTACTTCAACCCAAGGGAGTTTTTGGATTGTCTGTGTGT
GTGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCGT
GCGCGTGTGTGTGTGTGTTCGTGTGTCTACTTGTGTTTATACAGTGCCAT
TAGTGTGTGTTCCGCCAGAAAGGGTCTACAGGTGAGGGCATGCAGTCTGC
CATCTCAGAGCCTTGTTTGGCGCATGTCTATAAACGTTTTCTTACCTTTT
CTGTACTTTTTCACAGCCTGTGGAGCTGCCAGATGGAAGTTTGTACATAG
TTGTCCGCAATCAGCATCAGTACAAATGTCACTGCAAGATGGTCATGCGC
AGCTTCGACGGGGGTGAAACATTACCGCGGGAACACATGTTCCTGGATAG
GGCACTCATCGAGCCGAGGATTACGTCTGGGCTGCGGTATCACAACGGAG
TTCTGTTCTACTCAGGACCCAACAGGCCACTGGCACGTAGGTGCTTCTTA
CTCAATATCGCATGCACAATGTGTTGTTGTCAGACCGCATGGAATGTCTA
GTATGTTGTTCAATCTACGAATTAGATATGTTACGTTTGCAATTGTCTCT
AGCCAGAGACATTTCAGCTCTTACGTGGGAGCCTCGTGGCTCGAGGAAAA
GGACAACATAATACTTCCTGTAAATGCAGAAATGTTCGCGGTGGTTTTGT
GTTCGCGGTTTTCGCGGTGAACTCCTCAGCGCGAACTTAAAACCACCACG
AAACTTTTTGCCTACCTATAACTGTAGCACTACTATTTGATTCGAACGCG
AACTTAAAACCACCGCGAACACTCCATTTTCTCCCAACCGCGAAATAAAA
ACCACGCGATTTTAAATGCATTTACAGTAACGAGTCTATTTCTGGACATT
AGAGGTGTGAACTTTATTTTACAATGATGACAATCGTTCACTCTTGTTTT
GATATATGAAAGTAGTGGTAAAAGATAGCAACCATTAATATAACATGTTA
ATTCAGATATATTCTCTCTTATTGTGATTCATAAACATTGGAATCTATCA
TATTTTTAGTAAACGCAAGGAGGGACATGTACGATGTATGCATTGTTACC
TCTTGGAGTTCTGATGCTAAATCCTGCTATACTGTGTCACACTGCAGGAG
AAGACCTGTACCTACGATGGAGCCACGACTACGGCCACACATGGACTAAA
GGCTTACAGATATGGGACGATCTGGCTGGGTACTCGGTTATAA Coding sequence (CDS) from alignment at Sc0000327:244070..246562- >transcript:BL96033_evm2 ID=transcript:BL96033_evm2|Name=transcript:BL96033_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=678bp|location=Sequence derived from alignment at Sc0000327:244070..246562- (Branchiostoma lanceolatum)
ATGTTGATAAACAGTACGGATGACGGCATCACGTGGGGCCAGCCGAGAAA
TATAACCGACCACGTAGGAAAAGACTACGCCACACACCCAAGTCCAGGAT
ACGGCATTCAGAAAAAGCACAGCCCCTCAAAGGGAAGGCTGGTTGTATGC
GGACACGGTTTCCACGACGGTAAAGGTTTGGTGCTGCTGCTGAGTGATGA
CCACGGCGTGACGTGGAGACATGGGGCCTTCGTACCGAGTGTGCCGTTCC
AGGATAACACCATGGGGACATTTAACCCGGATGAATGCCAGCCTGTGGAG
CTGCCAGATGGAAGTTTGTACATAGTTGTCCGCAATCAGCATCAGTACAA
ATGTCACTGCAAGATGGTCATGCGCAGCTTCGACGGGGGTGAAACATTAC
CGCGGGAACACATGTTCCTGGATAGGGCACTCATCGAGCCGAGGATTACG
TCTGGGCTGCGGTATCACAACGGAGTTCTGTTCTACTCAGGACCCAACAG
GCCACTGGCACGTAGCCAGAGACATTTCAGCTCTTACGTGGGAGCCTCGT
GGCTCGAGGAAAAGGACAACATAATACTTCCTGAGAAGACCTGTACCTAC
GATGGAGCCACGACTACGGCCACACATGGACTAAAGGCTTACAGATATGG
GACGATCTGGCTGGGTACTCGGTTATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000327 | genome | Sc0000327:244070..246562 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96033_evm2 |
| Biotype | protein_coding |
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