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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96035_evm1 >transcript:BL96035_evm1-protein ID=transcript:BL96035_evm1-protein|Name=transcript:BL96035_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=343bp
MSVLQQDNTELCLQLSGKSQQPQKVYKLKSKVEDMPFYKPSKCKKKVRKL
YACGLCPVSTNISEQLYKHVAEEHGGPCYSEQRYMCGVCEQRFVYMGPMK
VHMRSHTNERPFKCPQCAYAGKTQSALSNHVRMHTGEKPWTCEHCGRDFT
RLDSMKRHISAHHTGHRPFKCNMCSYASVTQNSLKLHILAKHKKEKPYKC
SQCDFSTCYKTDLSVHERSHTGVKPYMCPHCTYASSNSSDLVKHVRRHTG
DRLFKCRHCDYTSTEKHTVEVHERGSHTNLRPFKCPDCPYRTAYQSHLPR
HIQTQILRTKKHPSLLRATHPQQRKKAWTHTPACGFQQGFPAL Run BLAST on NCBI mRNA from alignment at Sc0000329:192278..195463+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96035_evm1 ID=transcript:BL96035_evm1|Name=transcript:BL96035_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=3186bp|location=Sequence derived from alignment at Sc0000329:192278..195463+ (Branchiostoma lanceolatum)
ATGTCTGTCCTCCAACAAGACAACACCGAGCTGTGCCTTCAGCTATCCGG
CAAGTCACAACAGCCACAGAAGGTCTACAAGCTGAAGAGCAAAGTGGAAG
ACATGCCGTTCTACAAACCATCGAAATGTAAGAAGAAAGTGCGTAAGCTG
TACGCCTGTGGTCTCTGCCCCGTTAGTACTAACATCTCTGAGCAGCTGTA
TAAACATGTTGCGGAAGAGCATGGCGGCCCGTGCTATTCTGAGCAGCGCT
ACATGTGCGGGGTCTGCGAGCAGAGGTTTGTCTACATGGGCCCCATGAAA
GTCCACATGCGGAGTCACACCAACGAACGACCCTTCAAGTGTCCACAATG
TGCTTATGCTGGGTGAGTACTATTTATGTATTTGTAGCCTGTGTAAGATG
AGAGTATAGTTTAGAAGATGCAGTAATTGTCTTCTAAGTTCATTATTGAT
TTGTGTAGATGTTCAGTTTGGTTCGTTGTAAACACACAAAAAACATCAAC
AGGAAGCTAGACATTATTTTGTATCCTTCCTTTCAGTACAAATTCAATGG
AGTAGTAGTTCAGACACCTCAAGCTCTGCACCTGATTTTATTGTCACATC
CAATATCAAAGACTTATTTGACTGTCAGTCACCCATGCCTTTGTCAGCAT
GAATGACTATTGGCATTAGACTCAAAGAATTGGAAGTTTGTGGTCAAATG
TTTGTTGGCAGGGTGTGTTGATGGCTTCTGTTTATATAAATGATTATTGT
GGTGAACAGTAAGTTTGATTTGTATTCCCACAGTAAAACCCAGTCAGCCC
TCTCCAACCATGTGAGGATGCACACTGGTGAGAAACCCTGGACCTGTGAG
CACTGTGGTCGTGACTTCACCCGGCTGGACAGTATGAAGCGCCACATCAG
TGCACATCACACGGGGCACAGGCCATTCAAGTAAGCTAGCCGCCTCCGTG
GAAAATGTTCTATGAATAGCATAATGCAGAGATGCAAGAAATGTTAACCT
TCTGCCTACTAAGGTAGCCATTAAGTACTAATGGTTATGGGGTCAGGCAG
CAGGGAGTGTAAGGGCACACTTATACATGGGTAGATGCCATAAAAAATTG
CATAATAACTGATTTAAGTCTCATTTTGAGGGTCATAGGGAAAGTTGCTT
CTTGTAACTTTCATGTGATTATTTTGTGTGTTATTGGGATAACCTGAAGA
GTAAAAAAAAAATTATGAACTGATTTTCGTCTCCCTTTTGCCTAGGTGCA
ACATGTGTTCATATGCAAGTGTGACACAGAACTCACTGAAACTACACATC
CTTGCTAAACACAAGAAGGAGAAGCCCTACAAGTGTTCCCAGTGTGATTT
TTCCACATGCTACAAGACAGATCTGTCTGTGCATGAGCGGTCCCACACTG
GTGTCAAACCCTACATGTGTCCCCACTGCACCTATGCCAGCTCTAACAGC
AGTGACCTGGTCAAACATGTGCGCAGACACACTGGGGATAGGCTCTTCAA
GTGCAGGTATTTCTTGGGGTTTTGACGTTTCTGAAATTGGCTCAAATCTA
CTCTGCAATTTTTCTAACATTTGATATATAAACACCCTGTAAGAGCTGTG
CAGGCAATGTACTGAAAGCTATGGGAAGTTCTAAATGTAGATAGCATTTA
CCTGGTCAACTGGAAACTAGTCTTAGTGGTACAGTAGATTCCAATTATTT
GTATACCTTTTTTCTGTATATTTCGTATTTCTGTATAGAATTCCAAAACA
CCAAACCATTTACCATCCACTCAATGGTAAAAGCAATGTATAACTGTATC
GTCCATAATCGTAAAGTTCGGTGTATTGTATAGAATCTTGTCCGATTTTA
TCGTAAAATGACCCGAAACAATAGGCTAAATTTTTGGTCCCCTGTATTGT
AGTTTCGGGAGCGGGGACGCCGTCTACCGTTCGACAATCGCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTCCACAGACATTGTGACTACACCTCGACA
GAGAAGCATACAGTTGAGGTCCATGAGAGAGGCAGTCACACCAACCTCCG
ACCCTTCAAGTGTCCAGACTGCCCCTACCGCACCGCGTACCAGAGCCACC
TGCCTCGCCACATCCAAGTAAGTTTCACAAAGCCTACATGCCTGTCACCT
GACCAGTTCCAGTTGAAAAATGTATGTGTCTGTTCTATCGTTATTTTTGC
AAGTCTTCCTAGAAGCACGAAAGCCCACTTGTGTTAGTCTATAAAACGGA
AAAGTAAAGACTAAAGGTGTTTCTAACAAAAGAAGTTGAGTCACCAAATT
TTTTACCAGACCTAAAATGTCTTAAAGTTTTCCATCACAATTCTTCTGTG
ATGGCCTTCAAAGTTTCATGTAGTTGTTGCTGTTCTTTCTGTGCCTGGTA
CAGTGTTTCTTACAATGTTGGTTCCTTGTAACATTATTTTTCTTGTTGCA
GCGTATCCATGTTGAAGGCAGGAGGGCACATACCCGCTCTCGCAAATCTA
TGAAATCTCACAGCCAAGAAACCATACTCGCCTTACAGAAGCTCAAAAGA
CTGAACTCAACTGATGGAGACTCAACATTTAATTCCAGTTCTTCAATAGG
TAAGTAATTAGTTTACCTATGCTTGGAACCAATGCATCAAAATTGCTCAG
GATTCCAGTATACAAGATAGCAGATATTCTTACTGTTCAAGATACTTCAC
TTCAACACAAGCAAAAGTTGCTCACCTTGAATTTTCAGTCGCTCTTATGT
CGACCTTCTTTCACTTGTGTTGAAGTGAAGTATCAAACTTTATCATGGAA
TGTACCAACACAGATGAGCTTTCATGCTTAACATTACTCTTTTACATTTA
TTCTTTTCTGTAGACACAGATACTGAGGACCAAAAAACACCCATCTCTCC
TGAGAGCAACACATCCTCAACAGAGGAAAAAAGCATGGACCCACACCCCA
GCTTGTGGGTTCCAGCAGGGTTTCCCTGCCCTGTGA Coding sequence (CDS) from alignment at Sc0000329:192278..195463+ >transcript:BL96035_evm1 ID=transcript:BL96035_evm1|Name=transcript:BL96035_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1032bp|location=Sequence derived from alignment at Sc0000329:192278..195463+ (Branchiostoma lanceolatum)
ATGTCTGTCCTCCAACAAGACAACACCGAGCTGTGCCTTCAGCTATCCGG
CAAGTCACAACAGCCACAGAAGGTCTACAAGCTGAAGAGCAAAGTGGAAG
ACATGCCGTTCTACAAACCATCGAAATGTAAGAAGAAAGTGCGTAAGCTG
TACGCCTGTGGTCTCTGCCCCGTTAGTACTAACATCTCTGAGCAGCTGTA
TAAACATGTTGCGGAAGAGCATGGCGGCCCGTGCTATTCTGAGCAGCGCT
ACATGTGCGGGGTCTGCGAGCAGAGGTTTGTCTACATGGGCCCCATGAAA
GTCCACATGCGGAGTCACACCAACGAACGACCCTTCAAGTGTCCACAATG
TGCTTATGCTGGTAAAACCCAGTCAGCCCTCTCCAACCATGTGAGGATGC
ACACTGGTGAGAAACCCTGGACCTGTGAGCACTGTGGTCGTGACTTCACC
CGGCTGGACAGTATGAAGCGCCACATCAGTGCACATCACACGGGGCACAG
GCCATTCAAGTGCAACATGTGTTCATATGCAAGTGTGACACAGAACTCAC
TGAAACTACACATCCTTGCTAAACACAAGAAGGAGAAGCCCTACAAGTGT
TCCCAGTGTGATTTTTCCACATGCTACAAGACAGATCTGTCTGTGCATGA
GCGGTCCCACACTGGTGTCAAACCCTACATGTGTCCCCACTGCACCTATG
CCAGCTCTAACAGCAGTGACCTGGTCAAACATGTGCGCAGACACACTGGG
GATAGGCTCTTCAAGTGCAGACATTGTGACTACACCTCGACAGAGAAGCA
TACAGTTGAGGTCCATGAGAGAGGCAGTCACACCAACCTCCGACCCTTCA
AGTGTCCAGACTGCCCCTACCGCACCGCGTACCAGAGCCACCTGCCTCGC
CACATCCAAACACAGATACTGAGGACCAAAAAACACCCATCTCTCCTGAG
AGCAACACATCCTCAACAGAGGAAAAAAGCATGGACCCACACCCCAGCTT
GTGGGTTCCAGCAGGGTTTCCCTGCCCTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000329 | genome | Sc0000329:192278..195463 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96035_evm1 |
| Biotype | protein_coding |
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