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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96050_evm0 >transcript:BL96050_evm0-protein ID=transcript:BL96050_evm0-protein|Name=transcript:BL96050_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=725bp
MCYHFLRYGDDVTIQDGGIGVQDSSSSPRFGPFFRFSSCSRPRINTKSKK
PPSPKTMAPRRKRAVRAISEEDVVTMSTLRELLDNQKKEFTSLMELQKRN
FTSHIETVIDTTNRRIDDLVRKVQAVKGSLQYSQREIGGVKSSSQEQEQR
IKEIESQIAQLRSDIPPDPTRDDQSDSQFHRDDQSDSQSHRDDHSDSQSH
RNDHSDSQPRRDDQSDSQSHRDDHSDSQSHRNDHSDSQSRRDDQSDSQSH
IDDHSDSQSCSSCYSLPSPRRSSSYDIDNCSDLENFELEVAEEFDRNQDY
SQVVYDDESDDPSDNQMDNVYDNESEDGSDVEKINESDLWQLPVKGPDGS
TIFIRIHKDATVDEVISQISKRKGIRMEQLCVMYTTDKLDYGQGKRLSDY
HIEDMYTLHYTVSGAKPPLFKQRCPSPQEQQEDDKTTDGSDDMDEDSNIW
QLTAKLNDTNAHHIRIKKDATVDELIEKISDRIKIPIESLSIIFTTKRLE
YGQGKQLSDYGIQDKSTMFVVLRLEVPSLDSLASPTDLWQLSIKDNTGFT
YHIRIHKDTIVDKLIDKISEANGSPRERMTFVYKRNQKSCQLEYGKRKRL
TDYGIQDKSTIEIIFRTRVTASESQASPPAHVKVKQEEDVKADDASKSSN
IWQLTVCHLSGRKDNIIIHKDATVDRLMDKISERSGIPTVQMRNILYRGQ
KLYQGRRLSDYPLQNNSTLFLGLRL Run BLAST on NCBI mRNA from alignment at Sc0000357:95417..100536- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96050_evm0 ID=transcript:BL96050_evm0|Name=transcript:BL96050_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=5120bp|location=Sequence derived from alignment at Sc0000357:95417..100536- (Branchiostoma lanceolatum)
ATGTGCTACCATTTTCTCCGTTATGGAGATGACGTCACCATCCAAGATGG
CGGAATAGGAGTGCAAGACTCCTCCTCGTCTCCAAGATTCGGGCCGTTTT
TCCGATTCAGCTCGTGCAGTCGGCCCCGTATCAACACCAAGAGTAAAAAG
GTGAGGTGCTGAAGACTTAACCGGCCGCCGAACACCCAAATCTTTCCTCT
ATCGTGTGTTATTTGTGACACCGTGACCATATAAAAGATAAGTTACTTTC
TTCAAAGTTTGACGAGGATGATAACGTTAGGGGATAAGGGTCACTGCGCT
GTGTAGGGGTGCGATCACTATCAATCTATGCAATCTTTTGGGCTGTATTT
CTTCAGTTTTTATAAGTCTTATATGGGGACTGCATGTCCAATTCGATGCC
TTTTAATGTTAAAACTCCTCTCGTTGCAGCATAGCCCCCCTCCCCCAAGA
CTATGGCGCCAAGGAGAAAACGCGCAGTTCGCGCCATCTCTGAGGAAGAT
GTGGTCACCATGTCGACATTACGAGAACTTCTCGACAACCAGAAGAAGGA
GTTTACCAGTCTCATGGAGCTACAGAAGAGGAACTTTACATCCCATATTG
AGACGGTTATAGACACGACCAACAGGAGGATAGATGACCTTGTCCGCAAG
GTTCAGGCAGTCAAGGGAAGCCTGCAGTACTCACAGAGGGAGATAGGGGG
TGTAAAATCATCATCCCAAGAACAGGAGCAGAGAATCAAAGAGATTGAGT
CACAAATCGCACAACTCAGATCAGACATACCCCCTGACCCAACGAGAGAT
GACCAGTCGGACAGCCAATTTCATAGAGATGATCAGTCAGACAGCCAATC
CCATAGAGATGACCACTCGGACAGCCAGTCCCATAGAAATGACCACTCGG
ACAGCCAGCCCCGCAGAGATGACCAGTCGGACAGCCAATCTCATAGAGAT
GACCACTCTGACAGCCAGTCCCATAGAAATGACCACTCTGACAGCCAATC
CCGTAGAGATGACCAGTCGGACAGCCAGTCCCATATAGATGACCACTCAG
ACAGCCAATCCTGCAGTAGCTGCTATTCATTGCCTTCACCGAGAAGGTCA
TCAAGTTATGATATTGATAATTGTAGTGATTTAGAGAATTTTGAATTAGA
GGTCGCTGAGGAATTTGATAGGAATCAGGATTATAGCCAGGTGGTTTATG
ATGATGAGAGTGATGATCCGAGTGATAATCAGATGGATAATGTCTATGAT
AATGAGAGTGAAGATGGTTCTGATGTGGAGAAAATAAATGAAAGTGACCT
TTGGCAACTTCCCGTCAAGGGACCAGATGGAAGCACCATCTTCATAAGAA
TCCACAAGGTATGTTGATGAAGGTTATAGGAAAGTTGAAGATAACAAGAA
ATGATTAGTCATATGTAATTAGTTATATTTTTTTAATGTTCTTAGTTGTA
TTATATAATGTAATTCAGTTATATGACAGCTACTTGAGCAACTGGATAGA
TTTTGTTAACGATCAGATGTTAGCATACAAATTTGTCCTGCGGGAAGGCT
ATATCATATAGGCTGTATATGTGGGTCCTGTATATGTACGGTTTGGGGTG
TTTTTCAGCTGGACGCATCACACTGTACCAAAACCCTCCAAATACGGAAA
TAATAATGCCACCGCAGCGCAGAAAAAAAGTCAAGGGAAAATGACCTGAT
TAAGAAATCAAATGAATGAAATAAATTGTGTAAAGAATGTCAGCAGAACA
CTTTTGGGTTAAACTTGCCCTCTTGTCATATACTTGTCTTCAACTCATTT
ATATATAAATTCATACATGTCAAGTACAATGTACTCAGATTTTCCTCTAA
GTAACTGATGAAGATAATGGATGAAATCTGAAACATCTGACCGTTTTTTT
AAACATATCCAGTTGCCTGTATAACTTTTGTATACTGTAATCCACAATGT
ACAACTGTATCATGGACATTGCTTCTCCGTACCTGTCTCTGATTTTTGTG
TCATCTCTCTATTAGCAAATTTGGGTTGTAGAGTTCAAGATAAGATGGTA
TGATTATCTGGGTGTAGATATTTTACTGTGTATAAAAAGTAAAAGGGTGC
TATCAGAAACCCCTGTCTGATTTCTTTCTGTGGCTACAAAGCACAGACTC
AGTGGGTATGTTAGACTGGTGATGGAAGGTTGTTAGGTTAATGACTATCA
CAGTATGTGTTCTTGGATTATGTTACATAGTGGGCCATGTGTACTCATGT
GTGTTATCTTGTAGGATGCCACAGTGGATGAGGTGATCAGCCAGATAAGC
AAGAGGAAAGGCATTCGTATGGAGCAGCTGTGTGTCATGTACACAACGGA
CAAGCTGGACTATGGCCAGGGCAAACGTCTATCTGACTACCACATTGAAG
ACATGTACACCCTTCATTACACTGTAAGTGGAGCAAAGCCTCCTTTGTTC
AAGCAGAGATGTCCCAGTCCACAGGAACAGCAGGAAGATGACAAGACCAC
CGATGGTTCTGATGATATGGATGAGGACAGCAACATTTGGCAACTTACCG
CCAAGTTAAACGACACAAATGCTCATCATATAAGGATCAAAAAGGTGCCT
ATTACCATAGAATTCAGATCGTGTGTAGCTTGACTGTATGATGATTGCAT
ACTGATAGACTGCTGTTCTCCAAGCAAAGGTTTTGATCGGGAGGCTAGTA
GTGGCCACGATTAAAAATGGTGGCCACTACTAGCCCCTTGATCAAAACCT
CTGCATGGAGGGAAATAAACTGCTGATGTAGGGCACGATAGCCAGTCACT
TACGTCCATACCACACCACTGTTGTACATCTACGTCATGAACCGACAATT
CCTATAGAAACAAATGGCCAGTGTTCTCAGAAATAAGTGGGTTGACAACC
TTGTTTGGTGCCAGTTCTGCAAATTAGAAATTTATAAGCAGTGAAGAAAT
GCAATAATTCATAATTCTGACACATATCTCAGGTGGTGATGAATATCATA
AGATACAAATCATGCATATCAGGACATGATATGACACCATTTATTAGTTT
TCAATATTCTCTAATTTCTTGGTAATATGATGGACAGGTGAGGCTATCAC
ATAAAAAACATGTTTCCAAAAGCCATAACAGTTCTTTACATCTGGTTGGC
ACACTAATGTGGTCACCGAATTCTAGTTACCTTCACCAAGAAGGTTATGT
TTTCAGGAATGTTCTTGCGTGTGTCTGTGAACATGATAATCAAGAATACC
TGGGTGAATTGTCTTTATATTTTGAGTGTGATTAGGTCTTGATGAGAACT
CAAAATGAATTGGGCCCACTACCAGCTTGCTATAGTACTGCAGTGGAACT
TCTGGTCTGGTTTTCATATCTTTTTCTTGATGTTGTGAGGTCATCTATGA
TTCATACTGTCTGTTCTTGCAGGATGCCACAGTAGATGAACTGATTGAGA
AAATCAGTGACAGGATCAAGATACCTATCGAGTCGCTGTCCATCATTTTC
ACGACCAAACGGCTGGAGTATGGGCAGGGGAAACAGCTGTCAGACTACGG
CATTCAGGACAAGTCCACCATGTTTGTTGTCCTGCGTCTGGAAGTGCCTT
CTTTAGACAGCCTTGCATCACCCACTGACCTCTGGCAACTTTCTATCAAG
GACAACACTGGATTTACATATCATATCAGGATCCACAAGGTATTTATTGC
TTTGTATGAAATGTTGATTGACTATGTGAATGTACAGTATGTTGATATTG
ATAATGTCGAAGACTGAACAATAATTGGAGATCTATAAGGCCTAAGAAAA
AAAAATGTTGTCTTTCTGGTCACGGTTCTGAAAAGATTAGGATTGGTTGG
TAGGGATTGTTTTCTTCTTTTGTTTTAGATGTCGGGCCTATGATAACACA
TAACATGATGTGTTAGTAGTGTGCGGCCCAATAGAGAGTTACATTATGCA
GAACCTCCTTAACCCCCTTGCATTATGTAACAAATGTTGCTACACCTCTA
CTTGCTCAGCTACATCAATGATGTGCTGGGGACATGGTCTTCACAATGTT
CTGTCGTGACAGTTGGCCATGATGTATTCTCATGTGTCTCATCTTTGCAG
GATACCATTGTGGACAAACTGATCGATAAGATCAGTGAGGCCAATGGCTC
TCCCCGTGAGCGCATGACTTTCGTGTACAAGAGGAACCAAAAGTCGTGTC
AGTTGGAGTACGGTAAGAGGAAGCGTCTGACCGACTACGGTATTCAAGAC
AAGTCCACCATCGAAATCATCTTCCGCACCAGAGTGACAGCTTCAGAGAG
CCAGGCCTCACCCCCGGCACACGTGAAGGTAAAGCAGGAGGAAGATGTCA
AGGCCGATGATGCCTCTAAGAGCAGCAACATCTGGCAACTTACTGTTTGC
CACCTCAGTGGACGAAAGGATAATATAATAATCCACAAGGTATTTATCAC
TCATGTGTAAACTGAACTGACCTTGTATGTTCTTCATCTACTGAATTGAA
GCTTGGGAGGTATTTGGTAAGAGGGGTGAAAATAAGACAGTATCAGATCC
CTGAAGGTCAAAGAGCAGTATTTAGTGACCTCCTACTCAATTCATTACAG
TACCTGAGCTAAGCAGTGTCTGTGGGTCTATTTCTAGATGACTCGACTCA
TGTTAGCCAGGAGATTCCAAAGAAGTGAGGATACTGTAATTTAATTTATC
TTTACAGTAGCAAAATTTCATGGTGTAAGGAAAATAGACATTTTCACTGA
ACTTTAAGTTCATGGTGGTGGCAAGTGATTTACAGACGGGATGTGTGAAG
AAATCATGAATGATAACACTTTTTTTTTTCATGGTGATGATAAGTCCACG
GTACAAGAGGTAACCGTGAAAACAGTGAACATAAAGTTACAGTGAAAGAA
ACAAGAATTACAATATGATTAACTTGAAGGGGTTTTGGGTCTCTTCTTGC
AGGATGCCACCGTGGACAGACTGATGGATAAGATCAGTGAGAGGAGCGGT
ATTCCTACGGTACAGATGCGTAACATCCTGTACAGGGGACAGAAACTGTA
CCAGGGGAGACGTCTGTCCGACTACCCTCTTCAAAACAACTCTACCCTAT
TTCTGGGTCTGCGTCTGTGA Coding sequence (CDS) from alignment at Sc0000357:95417..100536- >transcript:BL96050_evm0 ID=transcript:BL96050_evm0|Name=transcript:BL96050_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=2178bp|location=Sequence derived from alignment at Sc0000357:95417..100536- (Branchiostoma lanceolatum)
ATGTGCTACCATTTTCTCCGTTATGGAGATGACGTCACCATCCAAGATGG
CGGAATAGGAGTGCAAGACTCCTCCTCGTCTCCAAGATTCGGGCCGTTTT
TCCGATTCAGCTCGTGCAGTCGGCCCCGTATCAACACCAAGAGTAAAAAG
CCCCCCTCCCCCAAGACTATGGCGCCAAGGAGAAAACGCGCAGTTCGCGC
CATCTCTGAGGAAGATGTGGTCACCATGTCGACATTACGAGAACTTCTCG
ACAACCAGAAGAAGGAGTTTACCAGTCTCATGGAGCTACAGAAGAGGAAC
TTTACATCCCATATTGAGACGGTTATAGACACGACCAACAGGAGGATAGA
TGACCTTGTCCGCAAGGTTCAGGCAGTCAAGGGAAGCCTGCAGTACTCAC
AGAGGGAGATAGGGGGTGTAAAATCATCATCCCAAGAACAGGAGCAGAGA
ATCAAAGAGATTGAGTCACAAATCGCACAACTCAGATCAGACATACCCCC
TGACCCAACGAGAGATGACCAGTCGGACAGCCAATTTCATAGAGATGATC
AGTCAGACAGCCAATCCCATAGAGATGACCACTCGGACAGCCAGTCCCAT
AGAAATGACCACTCGGACAGCCAGCCCCGCAGAGATGACCAGTCGGACAG
CCAATCTCATAGAGATGACCACTCTGACAGCCAGTCCCATAGAAATGACC
ACTCTGACAGCCAATCCCGTAGAGATGACCAGTCGGACAGCCAGTCCCAT
ATAGATGACCACTCAGACAGCCAATCCTGCAGTAGCTGCTATTCATTGCC
TTCACCGAGAAGGTCATCAAGTTATGATATTGATAATTGTAGTGATTTAG
AGAATTTTGAATTAGAGGTCGCTGAGGAATTTGATAGGAATCAGGATTAT
AGCCAGGTGGTTTATGATGATGAGAGTGATGATCCGAGTGATAATCAGAT
GGATAATGTCTATGATAATGAGAGTGAAGATGGTTCTGATGTGGAGAAAA
TAAATGAAAGTGACCTTTGGCAACTTCCCGTCAAGGGACCAGATGGAAGC
ACCATCTTCATAAGAATCCACAAGGATGCCACAGTGGATGAGGTGATCAG
CCAGATAAGCAAGAGGAAAGGCATTCGTATGGAGCAGCTGTGTGTCATGT
ACACAACGGACAAGCTGGACTATGGCCAGGGCAAACGTCTATCTGACTAC
CACATTGAAGACATGTACACCCTTCATTACACTGTAAGTGGAGCAAAGCC
TCCTTTGTTCAAGCAGAGATGTCCCAGTCCACAGGAACAGCAGGAAGATG
ACAAGACCACCGATGGTTCTGATGATATGGATGAGGACAGCAACATTTGG
CAACTTACCGCCAAGTTAAACGACACAAATGCTCATCATATAAGGATCAA
AAAGGATGCCACAGTAGATGAACTGATTGAGAAAATCAGTGACAGGATCA
AGATACCTATCGAGTCGCTGTCCATCATTTTCACGACCAAACGGCTGGAG
TATGGGCAGGGGAAACAGCTGTCAGACTACGGCATTCAGGACAAGTCCAC
CATGTTTGTTGTCCTGCGTCTGGAAGTGCCTTCTTTAGACAGCCTTGCAT
CACCCACTGACCTCTGGCAACTTTCTATCAAGGACAACACTGGATTTACA
TATCATATCAGGATCCACAAGGATACCATTGTGGACAAACTGATCGATAA
GATCAGTGAGGCCAATGGCTCTCCCCGTGAGCGCATGACTTTCGTGTACA
AGAGGAACCAAAAGTCGTGTCAGTTGGAGTACGGTAAGAGGAAGCGTCTG
ACCGACTACGGTATTCAAGACAAGTCCACCATCGAAATCATCTTCCGCAC
CAGAGTGACAGCTTCAGAGAGCCAGGCCTCACCCCCGGCACACGTGAAGG
TAAAGCAGGAGGAAGATGTCAAGGCCGATGATGCCTCTAAGAGCAGCAAC
ATCTGGCAACTTACTGTTTGCCACCTCAGTGGACGAAAGGATAATATAAT
AATCCACAAGGATGCCACCGTGGACAGACTGATGGATAAGATCAGTGAGA
GGAGCGGTATTCCTACGGTACAGATGCGTAACATCCTGTACAGGGGACAG
AAACTGTACCAGGGGAGACGTCTGTCCGACTACCCTCTTCAAAACAACTC
TACCCTATTTCTGGGTCTGCGTCTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000357 | genome | Sc0000357:95417..100536 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96050_evm0 |
| Biotype | protein_coding |
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