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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96053_evm1 >transcript:BL96053_evm1-protein ID=transcript:BL96053_evm1-protein|Name=transcript:BL96053_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=478bp
MDIRRMFYVLIALMAAMIVFMWTYTIQINITYTDNIKTSLLQSQNQFIRN
IKEVHVQSPDMAALWSPTGVGWSVNEMIKRRVKVNDNETLLLTFVLDARN
RNVSIVNVTKLADFSPRPRSPKPSRRRRRRQSNVAPQQQQNIFPPPDTNG
ENQNSTNSTKPKYKRLSDEEDWNNLPDFAKTLPDNDPNFKFNWTGLVEFR
DLLEREVHSSDLFVMTKRNTPVNSTVRYFVDKSKYVITEDLNRILPKESP
FADKRFRNCSIVGSGGILSNSNCGKQIDSARFIIRFNVAPVMPEYRQDIG
SRTSLVTCNGDRLREKWRKFRSEYNVQRFMGHLDQYDPDVYIWSQPFTSS
MHTSALLQIHDILRIHNKTQRAIYNRPEHQGLARSFWRREKVYEMNLTSG
LLMVTTAIALCDEVYIYGFWPWLVDKNNNTIRYHYAHRGITGGLKNRWHH
IDREFEKLTELHHKGLIKLVTGKCQDKT Run BLAST on NCBI mRNA from alignment at Sc0000357:226037..230149- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96053_evm1 ID=transcript:BL96053_evm1|Name=transcript:BL96053_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=4113bp|location=Sequence derived from alignment at Sc0000357:226037..230149- (Branchiostoma lanceolatum)
ATGGACATCAGGAGAATGTTCTACGTGCTGATTGCCCTGATGGCCGCCAT
GATTGTGTTCATGTGGACCTACACCATCCAGATCAACATCACCTACACGG
ACAACATCAAAACAAGCCTGCTACAGTCACAGAACCAGTTTATAAGGTAG
AGTTAGACTGAATATATCTATAAACTCTATCGCGTATTGATCAACGTTCG
TGCAACAAAGCAATTATATTTACCAGACGGAATGAGGACACAGTGAATTA
CGCACGATGTTCTGCCCTTTCTTGCTTTGTCAGACATTGCCATAATTAGT
TTTCCCAAGAGGTTGAAATGATAATCATTTTAACCTCCTTGGTTTTCCTC
ATTATGTTCCATATTTGCGTTGAGTCTGTAGACATATTAGAGTTTTCGTC
CTAGCTATTGTGCAAGTACATTCTTGTTTTTCTAATTCTGTGAGCCTCAG
TGTTTCCTTGGTTTGTTGAGTTGTTTTGGTTCTGTTTGTTTGCTTGTTGT
AGGAACATAAAGGAAGTTCACGTGCAATCTCCGGACATGGCTGCCCTTTG
GTCTCCTACCGGAGTTGGATGGTCAGTCAATGAAATGATCAAGAGAAGGG
TCAAAGTTAACGATAACGAGACGTTACTTCTGACGTTTGTTTTGGATGCG
AGGTAAGATGGAGAGGTTGTTTTTCAGCGGTGATGGGACTGCTATTTAAA
ACACAACTTATACTGACAACGCTCGATTCATTTTTATTCACACCAGTGGT
CTGACATCATCATCCGTCGTTCCTCAAAGCGACCGTTCAAGATCTACTAC
TAAATTAAGAAGAAGCTGCAAACACTATTCATTTGGCCAATAAACATGTA
GCACTTTACAAAATAGAGAATGTATTATAACAGACAGAAACGTTTAATAA
CGTTATATCATGTCAATACGCCATTAACGTCCATATTCATGTAGTCAAAG
TTTATCAAAAATAATAGACCAGCATTATTGTATTGATTGCTTTGTCATTG
TTGCCATAACATTCATTCATTAATTCATATGCCAGTACAATGATTGTTGA
AAGACAACAACTACATATATTTGCGTTGTGTAACATTTCAACCCTGCCCT
TTACAGACTTTGAGATAATTGAAACAGTTAGTCACATGCGTTTTTGTTTC
AGAAATCGTAACGTCTCCATTGTAAACGTCACCAAGCTGGCCGATTTCAG
TCCCAGACCCCGGTCGCCCAAACCCAGTCGCCGCCGCAGACGGCGTCAGT
CAAACGTTGCGCCCCAACAACAACAGAACATATTTCCTCCCCCAGACACG
AACGGTGAAAATCAGAACAGTACGAACAGCACGAAACCAAAGTACAAGAG
GCTTTCCGACGAGGAGGATTGGAACAACTTGCCTGATTTTGCCAAGACGC
TTCCAGACAACGATCCGAACTTCAAGTTCAACTGGACGGGGCTGGTGGAG
TTCAGGTTGGTCATCATTCCTATTTAAATGGTTCCAGACTTTATGATTAT
TTTTCAAAACGTTATGGTTATTATAAGTTCAGCCAGGAAATTAGGCCGTG
TAAAGTATTACCTATTGCTTGGCTTTCGTCACACTTTATGTCATGTTCGC
GTTTTCAATAAAATCAACTAAATGTGATTTTCTTTTCTGTCAAAGTAACT
TACTCGCGTATTCCTTGAACTTTTTCTGTACTCCTGAAGAGACCTTCTTG
AGCGCGAGGTCCACAGTAGTGACCTGTTCGTCATGACCAAGAGGAACACC
CCAGTCAACTCCACCGTCAGGTACTTCGTGGACAAAAGTAAATACGTCAT
CACCGAGGACCTCAACCGGATATTACCGAAGGTTAGCCGAAAGTCAATCA
TGTAGGCACTAGATGGTGATCGCTGTGCGACCGTACAGTGACGAAAATTA
GATTTGTGCTGATTTCATAATTGAAAAATGATGCAAGATGTGAAAGTATG
ATTCAAAAGACAACAAAATACATAAAACGTAAAAAGAATTCGTTCATTAT
CTATGGAATTCGGTGAGCAACCTGGCACATCTTAATTTGCCGCTCAGTGG
AAAGGCCGGCGTGTTCCCCAGCTTGAAGACGACAACAAACCTGTCAAATT
TTGAACGAATCATATTCTGGCAGCTTTTTACGGCTCAAAGTAATGTACAT
TCCTTTCTACAAATATAGTACAAATGTTCTGCTATGTTCTGTTCCCCAGG
AGTCGCCGTTTGCAGACAAGAGATTTCGGAACTGCAGCATTGTGGGTAGT
GGAGGCATCCTGTCCAACAGTAACTGTGGGAAACAGATCGACTCGGCTAG
ATTCATCATCAGGTGGGCAGGACGAGCTTTAGTCTAACTATTCTGTTCAA
CCCTTTTATTATCAACTTGACTTGCGATCAGATTCAAAACCATTTTGTTT
AAAGCAGCATCTAAATGTAGCATCGGAGAAACTGGGTCATATCGACATAA
GTGTTATCTTAATTCAGTTTGTGCTATATTGTTTACTTCAATATACAGAA
GTTATGTTAAATATAGTATCACTAGAGTATTTGTGGAAAACTCCATCAGA
CATTGTTTGCTACCACTTTGTTGTCGAAAATCGAAAGAAACGCATTTTGG
TGTGAAGTAAATCCTTCTAACATATCCCTCTCGTCCCCAGGTTTAATGTG
GCCCCGGTTATGCCTGAGTACCGTCAGGACATCGGTTCAAGAACAAGTCT
GGTCACCTGCAACGGAGACAGACTCAGAGAAAAGTCAGTCAATATTTTCA
GATCTTCGATTACAACTAAAGCAATACATCACCATACGTATGCATGTGAA
TTCCGTCTCAGCGCTATCATTGTCTCAGAGCTACGAATGACATCATCATA
CGTATATTAGGGCATCTCCATGTACAGATATCCCTACCTATTGTCATTGA
TTATGCAATGCCACATAACGTTAAAAAAACTCAATACAACAAAGTTTAAG
TCTTCAGTTACATGATTGTGTTCCATATTCTTAGGTGGCGCAAGTTCCGA
TCAGAGTACAATGTGCAAAGGTTCATGGGACATCTGGACCAGTACGATCC
GGATGTGTACATCTGGTCTCAACCGTTCACGAGCAGTATGCACACCAGCG
CACTGTTACAGATACACGATATACTCAGGTAACTACAGTATGAACACCAA
CGCACTGTTACAGATACACGATATACTCAGGTAACTACAGTATGCACACC
AGCGCACTGTTACAGATACACGATATACTCAGGTAACTACAGTATGCACA
CCTAGCCTGTTGCGATCTGTAAATGATTGAAAAAAGTCGTATACGTCAGC
GGTTACATCCGAACTGAATAATTTCATCAAGTTGGTAGAAAATAGGACAT
TGAAGTTTTCTTTTACACAACCAGTAAAACTCACCTGCTGACGTTTCGGT
GTCTGTCAGATACCTTCCTCAGAGCTTCTGACTGGAGTACTGCTTGGTAA
GATGTAACATGTGTTTAACTTTAACGTTTGGTGCCCCTCTTTATTTCTAG
AATACACAATAAGACCCAGAGAGCCATCTACAACCGGCCGGAACATCAAG
GTCTGGCCAGGTCCTTCTGGAGACGAGAAAAGGTGTACGAGATGAACTTG
ACTTCAGGTAAATATAGCTATTCAAAGGTGCAAAATAACATTTAACATTG
ATAACGATTTAGGGGGAACAAGCAAAGTAAAAGGCGATGGCGAACACCAG
TGGCAAACAAGCTGTACTCATGCTAACACGATTATACCGGCTATAGAAAT
ACAGATACACAGAATGAGAAGAGTTGGGATGGCTCGGTGTGATTGGTCCA
AATCTTGAGGACATTACCGGTTCATGCCTTCTCTCCGGTCACTCGCTGAC
CAATGACCAATGCCATTTCTGCAGGGTTGTTAATGGTGACCACCGCTATC
GCCCTGTGTGATGAGGTGTACATCTACGGGTTCTGGCCGTGGCTAGTGGA
CAAGAACAACAACACCATCCGGTATCACTACGCGCACAGAGGCATCACGG
GAGGACTCAAAAACAGATGGCACCACATCGACAGGGAGTTTGAAAAACTA
ACCGAACTGCACCACAAAGGACTCATCAAATTAGTCACGGGAAAATGCCA
GGACAAGACGTGA Coding sequence (CDS) from alignment at Sc0000357:226037..230149- >transcript:BL96053_evm1 ID=transcript:BL96053_evm1|Name=transcript:BL96053_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1437bp|location=Sequence derived from alignment at Sc0000357:226037..230149- (Branchiostoma lanceolatum)
ATGGACATCAGGAGAATGTTCTACGTGCTGATTGCCCTGATGGCCGCCAT
GATTGTGTTCATGTGGACCTACACCATCCAGATCAACATCACCTACACGG
ACAACATCAAAACAAGCCTGCTACAGTCACAGAACCAGTTTATAAGGAAC
ATAAAGGAAGTTCACGTGCAATCTCCGGACATGGCTGCCCTTTGGTCTCC
TACCGGAGTTGGATGGTCAGTCAATGAAATGATCAAGAGAAGGGTCAAAG
TTAACGATAACGAGACGTTACTTCTGACGTTTGTTTTGGATGCGAGAAAT
CGTAACGTCTCCATTGTAAACGTCACCAAGCTGGCCGATTTCAGTCCCAG
ACCCCGGTCGCCCAAACCCAGTCGCCGCCGCAGACGGCGTCAGTCAAACG
TTGCGCCCCAACAACAACAGAACATATTTCCTCCCCCAGACACGAACGGT
GAAAATCAGAACAGTACGAACAGCACGAAACCAAAGTACAAGAGGCTTTC
CGACGAGGAGGATTGGAACAACTTGCCTGATTTTGCCAAGACGCTTCCAG
ACAACGATCCGAACTTCAAGTTCAACTGGACGGGGCTGGTGGAGTTCAGA
GACCTTCTTGAGCGCGAGGTCCACAGTAGTGACCTGTTCGTCATGACCAA
GAGGAACACCCCAGTCAACTCCACCGTCAGGTACTTCGTGGACAAAAGTA
AATACGTCATCACCGAGGACCTCAACCGGATATTACCGAAGGAGTCGCCG
TTTGCAGACAAGAGATTTCGGAACTGCAGCATTGTGGGTAGTGGAGGCAT
CCTGTCCAACAGTAACTGTGGGAAACAGATCGACTCGGCTAGATTCATCA
TCAGGTTTAATGTGGCCCCGGTTATGCCTGAGTACCGTCAGGACATCGGT
TCAAGAACAAGTCTGGTCACCTGCAACGGAGACAGACTCAGAGAAAAGTG
GCGCAAGTTCCGATCAGAGTACAATGTGCAAAGGTTCATGGGACATCTGG
ACCAGTACGATCCGGATGTGTACATCTGGTCTCAACCGTTCACGAGCAGT
ATGCACACCAGCGCACTGTTACAGATACACGATATACTCAGAATACACAA
TAAGACCCAGAGAGCCATCTACAACCGGCCGGAACATCAAGGTCTGGCCA
GGTCCTTCTGGAGACGAGAAAAGGTGTACGAGATGAACTTGACTTCAGGG
TTGTTAATGGTGACCACCGCTATCGCCCTGTGTGATGAGGTGTACATCTA
CGGGTTCTGGCCGTGGCTAGTGGACAAGAACAACAACACCATCCGGTATC
ACTACGCGCACAGAGGCATCACGGGAGGACTCAAAAACAGATGGCACCAC
ATCGACAGGGAGTTTGAAAAACTAACCGAACTGCACCACAAAGGACTCAT
CAAATTAGTCACGGGAAAATGCCAGGACAAGACGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000357 | genome | Sc0000357:226037..230149 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96053_evm1 |
| Biotype | protein_coding |
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