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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96056_evm2 >transcript:BL96056_evm2-protein ID=transcript:BL96056_evm2-protein|Name=transcript:BL96056_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=378bp
MCDRSPSSRPSGKNFAASYPHVPTSPDRTTSGSVQGKTYVKLNDNDKKLG
KLLVTVKSKKRRDKEGLILLEGKRLIKDAIKAGGILESLFFCHVEDLEGL
PLQETTAELYKVKHKDIQDWSDTVTPQKVIAIFTRPDVNRLFTPGCADVD
MLPLTLICDNIRDPGNMGTIIRSAAAAGCQKLLVTKGCVDVWESKVLRAG
ASAHFHLPIIKDLTWDAIPNYLEPDTVVFPADANVDVTNKFTLFHPPLSS
VRQSVPTRRKQTQDPDSSGDEDFEHDLPTSLPELVAVPYYSTHWVGGSTA
LVVGGETEGLSLESLLLCERTGGCRVFVPMLKSLDSLNSAVAASVVLFEA
KRQHLAQLTIGREDGVGRRARRGVQPEE Run BLAST on NCBI mRNA from alignment at Sc0000359:31940..36633+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96056_evm2 ID=transcript:BL96056_evm2|Name=transcript:BL96056_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=4694bp|location=Sequence derived from alignment at Sc0000359:31940..36633+ (Branchiostoma lanceolatum)
ATGTGTGATAGGTCACCAAGTTCACGACCTAGCGGGAAGAATTTCGCCGC
ATCCTACCCGCACGTACCAACGTCACCGGACAGGACAACGTCTGGTTCCG
TTCAAGGGAAAACTTATGTGAAGCTCAACGATAATGACAAGAAATTAGGG
TAATTTGTCTTCCTTGGTTATGGTATTCATTTCAGTGCACGTGTGTGTGT
GTGTGTGTGCGTGCGTGCGTGTGTGTTAATGTGTGTGTCATGTATGTGTT
TGTCACAACTAATTGTGTAAATGTGTGTCTGTTTTGTGTTGTTTTCTCCA
TATATATTCTACATAACTGCTGAACTTTGCTACATTGTACATGTTGTTGA
ATTTTCAAAGGTTATAATGACACATGGCATATCTTTTTCAGGAAACTTCT
TGTGACTGTCAAATCCAAAAAGAGGAGAGACAAAGAGGGCCTCATACTTC
TAGAGGGAAAGAGACTAATCAAGGTGAGGGAAAGTTTTCATTCATTAATC
ATTCATATTCATTCATTCATTCATTTGTAAGGGTAACTAATACTGTGTGA
CAGTGTCTATACTGACATTTCTTTTCATTGTTCGGCTGTTTGTTTTTTCT
TGAATAGCTTGAGAGAGGGCAAAAGATATTGATATCGAGGATTTTGAATG
TATAGTTTGCAGCAATAGATATTAAAAAGAATCAAATTGTGGGGTCGTGT
GGCGTAAGTGGTAGAGCGCGCGGCTGTCAAACAATGGGATCGATCCCGGG
TTGTGCCCAGAGACATGTCCAAACGTGCGCCCCGACGTTGTGTCCTTGGG
AAAGGCATGACTTTCCTCACAACACACTTATCGAGAAGACTAGGGGTAAC
CCGGTGTGCTTGGCCAAAAACGAGAGCCATAGCAAAGCCACATTGCACTA
CCACTAGCTACTAGTACTTGAAAAAGCATCATGCTTCAATTGACGATGAC
TGCTTTATTTTTTTTTCACAATTTTCAGGATGCCATAAAAGCAGGAGGAA
TCTTGGAGTCGTTGTTTTTCTGCCATGTGGAGGACTTGGAAGGCCTGCCT
CTCCAGGAGACAACTGCTGAACTCTACAAGGTCAAACACAAGGACATCCA
GGACTGGTCAGACACTGTGACCCCACAGAAGGTCATAGGTAAGAGGTCAA
ATCATCAGGGTTTGAGTATCTTTTTCAAGGTGTCCTGTTTTTCGTTGATG
AAGGTTAGACATCCAGGTAATAAGATACGCCAAAAATAATTACTCAAGCA
ACTGGATAAGATTTTGAAACAGTCAGACGTTTCAGACTGAAACGTCTGAC
TGTTTCAAAATCTTATCCAGTTGCTTGAGTAATTATTTTTGGCGTGTCCT
GTTTTTCATTTCAATGAATAAATAATTTCCTATTGGTAACTCTTTTTTCT
TGTTGTGATTTTAGGTGATCTGTGAAATAGAATGTACAGTTCTATACATT
TTATGCAGAGTAATTAGAAAAGAAACAGTGATAGAAATGATATCCCATGA
TATTAGTAGGCAATTTAGTTTTGGGTATGGCATGTCCAAAAGACACCAAG
CAGAAACAGTAGAGTTTGTTTGTTTTGTTTTTATTTGAATCTCCATTAGT
GTTAGATACAATCTTCCACTATTCTTCCTGGAGTTCACATTAATACATTA
AAAACATAATACAAGGAACAATACATATACAAATGAATGGCAGTTATGTA
CAAAATCAAGTGTGATACAATAAAAATCGTGAGAGGTCTTATGTAATAAG
GAATTAAAGGTCTCATACGCCGGGAGTGTCTTGTTTTATACATTATTTTG
AATTTCTTGATGATTCTGTTTATACATGTACCACTGGCTCCCATAAGGCA
ACAGACGTGCATATATCATAAAACAGAAGAGAGGAAATGATACCACTTGT
TTTAATAACCTATTCTAGGACCTAGGGGTGTCCCTGTGGTGTATGGTCTG
CACTTCTGTCACTTACCAATCTGGTTCAAATTACTTGGAACCAGAAGGCC
CGAGTTCGTGGCTGGGTTGGACACCTCTGGACAAGAGGTTCATTGAGTCA
TACCCATAAAAATGGTACATACTTCTGAAACAGTATGGAAGTTAAACACA
CTCCACTGCCAGTGGACTAGCCCCCTGCTACAGTGATTGCACCACAGTGT
GGCCCAGGGCTATGGAACAGGGATGGGCACTGCCCTATACACCTTATGGT
GTGGGAGGATTTTAATTAACTATTCTGGGACCTAGGACCTAACTTCCTGT
CAGTGTCCATTGACATATGTCTAGCATGTGGAAATAAATGTGAAGACTCA
CACAGACAAGGAAACAGACTCACCAAAAACAATACCTCCTGTTTCACGGA
GGTAACAACGCAACATGTTCATTCCTACCTGTTCTTTCAGCCATTTTTAC
CAGACCGGATGTGAACAGACTGTTTCACAGGGGTAACAACACAACATGAT
CATTCCCACCTGTAGTTCCAGCCATTTTTACCAGACCGGATGTGAACAGA
CTGTTTCACGGGGGTAACAACACAACACGTTCATTCCCACCTGTTCTTTC
AGCCATTTTTACCTGACCGGATGTGAACAGACTGTTTCACGGGGGTAACA
ACACAACACGTTCATTCCTACCTGTTCTTCCAGCCATTTTTACCAGACCG
GATGTGAACAGACTGTTCACCCCTGGCTGTGCTGATGTGGACATGCTGCC
CCTCACCCTGATCTGTGACAACATCCGTGACCCGGGTAACATGGGGACCA
TCATCAGGTCAGCCGCCGCAGCGGGCTGCCAGAAACTCCTGGTCACTAAA
GGTCAGACACTCTTTGACACTTCAACTTCAGTTAGCCCCAAATAATCCCG
CTAGGGGCAAAGTAGGGGGGGAGGAGGTCCCAGGCTAAGGCGGGCAGGCC
TCCAGCCTGGCGCGGAAAGACTCAACAGTGGGAGCCATAACAACCGCGCC
AGGCAGGGCGTTCCACTCGGGTATGGTGCGGGGGAAGAAGGAATTTTTGT
AAGAGTCTGTCCGGGCATAAAGTGGTTGAAATTTAAGCGTGTGGCTCCCC
TGGGTGCGCCCCTGAGCTGGTTTCAGTAGACTATCTGTGTTAATATTGAT
GTAGTTATTTACTTCTATATCATGTTATTGTTATTTCATTGCAGAACTTA
ACTCACTTGTGCCTCCACTCCAAACTTTCTCATGGTTAGGTCCCAATTAG
ACAAAAGGCGCCCCGCCGGTTAGTTGACGGACTGTCTTTTTTTTCACTTT
TGGGTGTGACCCCTACATGGCCCCGTGGGACACCCTGCGACTGCCAGGCT
ATTTTGGGGCCAGGCCAGGACCCTGAATCACTTTAACTCGGACTTAAAAT
CAATGCAGGACCTGGTAACGAATAGATGCCATGAGCTAATCATGCGAACA
CCGGGAGATACTGTAAATGGAGAAATGTTTGCGGTCGTTTTATATTTGCG
TTTTTTGCGGCGACCGTTTCACTGTGAACTTAAAACCACCGCGAACATTT
TTGTCCAGTACTGTAGCAGTATGTGACTATAGCACTGCCACGAAGTTAAA
ACCACCACGAACACTCGAGAACCCCTTGGCGCGAAATAAAAACCATGCGA
ACTCAAATACATTTACAGTAACATCCTTCCCACCTCCCGTCTTGCTAGGC
AGCTAAACATATGCCTCTGTTCCTTTACTTCAAACTTTGAGTCTTTTTTA
TGTAACAAATGATATGTAAAATCTATTGGTAGTATCTAGGACTCATACAT
GTAACGTTATACTAGTTATGAATTAGGCCCCCCTCTCACTGGACCCGTGG
CACACTGGTGGCGGTGCTGCGTCCTAAACAGGATTTGTGTTACCAAGGAG
GTTGTATAGCCTATATAACCTCCTTGGTGTTACCCTTGACTTTATAATGG
GAATATCATGACCAGAAAGAATAGCTATAGTATGACCAAAAAGACAACAA
AACACACAAAACTAAAAAATGTTCGTTTTTTGTCAATGAAATTCATTGAG
TGCTTTGTCAATTTGATCGCCGCAGCGACACCGCCAGCGTGCCGCGGGTC
CAGTGAGAGGGGGCCTTTACGAGTTGAAAAAGTTGCATCTGTTTGATGGA
ATGTTTCTTCCATTAGGTTGTGTGGATGTTTGGGAGAGCAAAGTTCTCAG
AGCAGGAGCTAGCGCCCACTTCCACCTGCCCATCATCAAGGACCTGACCT
GGGACGCTATACCCAACTACCTGGAGCCCGACACTGTCGTGTTTCCCGCG
GACGCAAACGTGGACGTAACCAACAAGTTCACGCTGTTCCACCCGCCCTT
GAGCTCCGTTAGACAATCCGTCCCTACGAGACGGAAGCAGACCCAGGACC
CCGACTCAAGCGGAGACGAGGATTTCGAACATGACCTCCCCACCTCCCTA
CCAGAGCTAGTTGCAGTACCGTACTACAGCACCCATTGGGTAGGGGGCAG
CACTGCACTAGTGGTGGGTGGAGAGACTGAGGGCCTGAGTCTGGAGTCCC
TGCTTCTGTGTGAGAGGACGGGAGGGTGCCGAGTGTTTGTGCCCATGTTG
AAGAGCCTAGATAGCCTGAACTCGGCTGTGGCAGCCAGTGTGGTCCTGTT
TGAGGCTAAGAGACAGCACCTGGCTCAGCTGACCATTGGAAGGGAAGACG
GTGTAGGGAGGAGGGCAAGGAGAGGTGTTCAACCGGAGGAATAA Coding sequence (CDS) from alignment at Sc0000359:31940..36633+ >transcript:BL96056_evm2 ID=transcript:BL96056_evm2|Name=transcript:BL96056_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=1137bp|location=Sequence derived from alignment at Sc0000359:31940..36633+ (Branchiostoma lanceolatum)
ATGTGTGATAGGTCACCAAGTTCACGACCTAGCGGGAAGAATTTCGCCGC
ATCCTACCCGCACGTACCAACGTCACCGGACAGGACAACGTCTGGTTCCG
TTCAAGGGAAAACTTATGTGAAGCTCAACGATAATGACAAGAAATTAGGG
AAACTTCTTGTGACTGTCAAATCCAAAAAGAGGAGAGACAAAGAGGGCCT
CATACTTCTAGAGGGAAAGAGACTAATCAAGGATGCCATAAAAGCAGGAG
GAATCTTGGAGTCGTTGTTTTTCTGCCATGTGGAGGACTTGGAAGGCCTG
CCTCTCCAGGAGACAACTGCTGAACTCTACAAGGTCAAACACAAGGACAT
CCAGGACTGGTCAGACACTGTGACCCCACAGAAGGTCATAGCCATTTTTA
CCAGACCGGATGTGAACAGACTGTTCACCCCTGGCTGTGCTGATGTGGAC
ATGCTGCCCCTCACCCTGATCTGTGACAACATCCGTGACCCGGGTAACAT
GGGGACCATCATCAGGTCAGCCGCCGCAGCGGGCTGCCAGAAACTCCTGG
TCACTAAAGGTTGTGTGGATGTTTGGGAGAGCAAAGTTCTCAGAGCAGGA
GCTAGCGCCCACTTCCACCTGCCCATCATCAAGGACCTGACCTGGGACGC
TATACCCAACTACCTGGAGCCCGACACTGTCGTGTTTCCCGCGGACGCAA
ACGTGGACGTAACCAACAAGTTCACGCTGTTCCACCCGCCCTTGAGCTCC
GTTAGACAATCCGTCCCTACGAGACGGAAGCAGACCCAGGACCCCGACTC
AAGCGGAGACGAGGATTTCGAACATGACCTCCCCACCTCCCTACCAGAGC
TAGTTGCAGTACCGTACTACAGCACCCATTGGGTAGGGGGCAGCACTGCA
CTAGTGGTGGGTGGAGAGACTGAGGGCCTGAGTCTGGAGTCCCTGCTTCT
GTGTGAGAGGACGGGAGGGTGCCGAGTGTTTGTGCCCATGTTGAAGAGCC
TAGATAGCCTGAACTCGGCTGTGGCAGCCAGTGTGGTCCTGTTTGAGGCT
AAGAGACAGCACCTGGCTCAGCTGACCATTGGAAGGGAAGACGGTGTAGG
GAGGAGGGCAAGGAGAGGTGTTCAACCGGAGGAATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000359 | genome | Sc0000359:31940..36633 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96056_evm2 |
| Biotype | protein_coding |
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