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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96065_evm1 >transcript:BL96065_evm1-protein ID=transcript:BL96065_evm1-protein|Name=transcript:BL96065_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=454bp
MPLDTVLCLDTSGSMAGRGMRELKKAVKEFLLGVQETASKHNLRENVGVV
EFGAKTRIVQPLTNNYAAVLRAVDNLNAGGTTPMFEGLMEALKEVLQNGG
VLVLSGQKKMTPRVILMTDGHPDDKENVLKAALSFGPAGWQAVGLPHPIP
IACVGCGGDVDGALLQAVAKLTNGMYVQGDIGQLSEFFRRQVLLIRFAAQ
FSHDMRQLRDLMVLRQFLAQMGESVDEEELVGLKTLLFAMLLCAADDDSD
DEEQDNMPPLGSRVQRGRDWKWGNQDRQGTGTVVQHRSDGNLVVEWDHDS
ASNYKYRFGAEGARDVRVVDEPRVIGAGGRIMPGCRVVRGRDWASRYGDQ
DGGRGSVGFVYKVKEGEDYNVHVRWPNKHKNVYKYQPNIKEIQIKEEHAV
LGTTAALAVLSLAGSGGPSGGPSGGTAVSSRPSSSRPSTGTGTRQGSSDN
CSVM Run BLAST on NCBI mRNA from alignment at Sc0000373:43155..47553+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96065_evm1 ID=transcript:BL96065_evm1|Name=transcript:BL96065_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=4399bp|location=Sequence derived from alignment at Sc0000373:43155..47553+ (Branchiostoma lanceolatum)
ATGCCGCTGGACACCGTCCTATGTCTGGACACGTCGGGCTCCATGGCGGG
AAGGGGCATGAGGGAACTCAAGAAGGCCGTCAAAGAGTTCCTTCTGGGAG
TACAGGTGAGGACGAGTCCACTCTTCTTTTCCCCAAAACGACCGATGGGT
AATGAAATACTATTGGATGGAAAGCGAAGAATTGGTCGCTTTAGCTACAT
GTACTAGGTTACTCATAGCTACAGAAAGGTAATAATTCCCAGAAAACTGG
GGATATTTCTCGTCGTGATTTCATGGATAATTCAATGACTTTGACCCCGT
AGGATGGAGAATGGAAAAGAACTTATATTGGTATCGTGTCTTGCTGAATA
TAACCGACAGGAGGCGCTTTGTAACAATGCATGACATCACATCCGAAGGA
AAAGCTTTTCAAACGTCAAGGTCAGAACAGGTCGAACTCGAAGCGTAATA
CTCGTTCGATACAGATAGCTTAGGGGGTAATGCGGCTGCATGGAGCAAAG
TCATTTCATTTAACTAAGATCAATCCGATGTCAATCATTGGTCGTTGGAA
CAAAAACGATGTTCTCGTCGACAGGAGACGGCCAGCAAACACAACCTCCG
GGAGAATGTTGGGGTGGTGGAATTTGGCGCCAAAACTCGCATCGTCCAAC
CACTCACCAATAACTACGCCGCAGTGCTGAGGGCTGTTGGTATGGGGAAC
GAATTATCTTTACACAATCATTTCATTTTATGTATTTTTTTCTCAATTTT
GACAAAACAATGAATATAAGAAGTGTTCTAGTTCCATATTCATACCAACA
TATTTGTTCAACCAGCTTGGCTACTTTTTGCAACGTTATGTTTATCTGTT
TGTTTGTTTCAGTTTGTTTGTTTGTTTCATTTTTCAACCATTCGATAAAG
CCCCACTATGACATAAATATAGCCATGATGAAAAACTCACCGTCCATCCA
TTTTCCGTCCAAATATTATCCTCTGTACAATTTGCACAGACAACCTGAAT
GCAGGAGGTACCACACCGATGTTCGAGGGTCTCATGGAGGCGTTGAAGGA
GGTTCTGCAGAACGGTACGTACCCTCTAATAGACTCACCTGTTTTTCATC
AAGGCAGAGTTATAAGAAAATAAGAGGATATAAGAAAATGAAATTGCAAA
CGTAAGAATTGGTTGATAGATTGCAGTATATCGTATAATCTTACATGAGA
TCAGGAGATGAGAGGAGAACTGTAATGACAGATCAAGAGGGTCCCATAAC
CCCTCCCCTTTTCCCCCAAGGTGGTGTGCTGGTCCTGTCTGGTCAGAAGA
AGATGACCCCAAGGGTCATCCTGATGACCGACGGACACCCTGACGTAAGT
CTTGATGCCAACGACATAACATAAATAGGCAATACATCTGGCAGTTACAT
GGCGAATGAAAAGTGAAAATTTACAGCATGGGTCTATTTTGATCGTCTCG
GTCTTAAGTAGAGCACTCGATAAAGGAAAAATACAAAATTGTGCCAGTTG
TTACACCCCGCCCTGNAGTAGTTACACCCCCGCCCTGGGTCTACACTCTT
ACAGGACAAGGAGAACGTCCTGAAGGCGGCGCTGTCTTTCGGTCCGGCGG
GCTGGCAGGCGGTGGGCCTGCCGCATCCCATCCCCATAGCCTGCGTGGGC
TGCGGCGGCGACGTGGACGGAGTAAGCGACTTTCACGGAGTCAAGCACTC
AACAGTCCTTTTTTCCGCACTTCAGTTTTCATCAAATTCCTTTTATATTT
CTGTAATCACGCGTTCTTACACATGTNTCCTTTTATGTTTCTGTAATCAC
GCGTTCTTACACATGTCGATGTTCGGTCCAGGCCCTTCTCCAGGCAGTGG
CGAAGCTGACTAACGGCATGTACGTGCAGGGGGACATCGGCCAGCTGTCG
GAGTTCTTCCGCAGACAGGTGCGTCACACACAGCACATGGAACCACTTTT
TTTGTTCAACATGGAAGAATAAATGATTCATTGGTTGTTCATTGCATATT
TATAAAACCAAATTTCCCATGGATTTGGAATGTTTCATTCAATCTCAGGT
GCTCCTGATCCGTTTTGCAGCCCAGTTCTCACACGGTAAGAAACGGTAAC
TCACAGCCATTATTGAAATTGTCCATTTTCTGACCATTTAGTGGTTGACC
TTTCCAGTCATTTGACTAAAGCTGTCACATTGCTTTCGCCATTTCAGACA
TGCGCCAGTTGCGGGATCTGATGGTACTGCGTCAGTTCTTGGCCCAGATG
GGAGAGAGCGTGGATGAGGAAGAACTGGTGAGCTCGCACGCACAGTTCGC
AGACAAACACATATTGAAAATGTTTTCATACAACTTTGGTACATTCCATT
GTTCATTGGATAATTGGAGTTGCTTGGAGAAGTTTTGGGTTAAAACCTGA
GTAATGGCATCCCACTACAAACCCCAAATAAAGTTTTTTTTGATTTGCCA
ATTAACCCTGAGAAGTGCTCATGACATTTTGATCAATCCACATGTCTGTT
TCCTCAGGTCGGACTGAAGACCCTGCTGTTCGCCATGCTGCTGTGTGCTG
CAGACGACGACAGTGACGACGAGGTATAAAGATAGGGATGAACCGTCGCT
CCAAACAGCGTCCGTCACTTCACTTCTGGAGTTTTGATACAGAGCGTATT
TGTCAGCGCTGTATTTGCATTGCTAGGCACATGTGAGAAAATACTGTTTC
GAATTGAACACAGGCTTGCAGCGCGTAATTCCCGCTCTATTGACCATTGA
AAACTGTAGGTGTAGGAAAAATTACATATAGAAACAAGAACTGTGGAAAG
GAAAAGTAAGGGGGCTGATTTCTGCTACACCAGGAGCAGGACAACATGCC
GCCGCTGGGATCTCGCGTGCAGCGTGGACGGGACTGGAAGTGGGGGAACC
AGGACCGACAGGGTACCGGCACGGTGGTCCAGCACAGGTCGGACGGTGAG
GAGATGATATTGTTGTTCTTTCAGTACTGGTAGCGTATTTTCTGCCATTC
ATCGTGTCATACGTATGTTTGTGTTAGAAAATAGCATTTTCGACAAAAAG
TCATGAAAAGCCATTGCTCTGGCCTACTCAACTAAATGTGTTTGTAACAT
ACATGATGCCAGGCAACCTTGTGGTTGAGTGGGACCATGACTCCGCCTCC
AACTATAAGTACCGGTTCGGCGCAGAGGGAGCAAGAGATGTGAGGGTAGG
TGCCCAGCATGCAGTGATCGTTTAATGTAATAAAAGCAGTCTTAAAAATT
CTCCCATTATCGTTGTCTAAAGTTCTGTCATATGAACCACAGACATTGTT
ATAATGATGAACGTTGAATCAGAGCATGTAGGACAGGGACACAGATAAGA
CATCATAAGTGCACTTTTTGTGGCAATAGGACAGTTGTTCAGTGTCATGC
AGGAGTCCTTCTTATTTAATGGAATAGATATCGGCACTATTTGTTTAAAA
TTGCCAGTGCAATAATCAATGCTTGTTTTCACCTACAGGTTGTGGACGAG
CCACGAGTGATCGGTGCGGGCGGACGCATCATGCCAGGGTGTCGGGTAGT
CAGGGGTGAGGACGTCTCTCTGTAGTGCACACTCGTACCATTTTCCCAAC
TTATGATTTTATGATTCATTTCACCCATGTATGAGTCGAGATATTATAAC
ATTGGAGGTTACACAGACAGCGTTATGTGGTTTTATGCTTCAGGACGAGA
CTGGGCTTCTCGCTACGGTGACCAGGACGGGGGGAGGGGGAGTGTCGGCT
TCGTCTACAAGGTCAAAGAAGGGGAGGACTACAACGTGCACGTAAGAAAC
ATCTCTGATGTCATCATCCTTCAGTAATGTGTGTCTTTGCATTCTAGACA
CGTCACGAGCTACACCACATATAATGTGACTGTTTTGATTGATTGTATGC
AGGATATTTGCTCTTTCTAAAACGCTTTTTATGCAGATACAAGCGATACT
TGGTGAACTGTCTCAACACTATTTTCAGGTCCGCTGGCCCAACAAGCACA
AGAACGTGTACAAGTATCAGCCCAACATCAAGGAGATTCAGATCAAGGAA
GGTACGGTAATGTCGTGTGAAAAAATCAAAAGTAACAAATTTAAAAGTTT
TGTTGCTTCTGTCGTTTCCCTTTATCCATGTTGTTCCGACACTTTTCTCG
TCATTTAGGTGCTACTCTTAACTTCTACTAAACTTCTGAATTACCATTTG
CCCTCGTTTGCCCCTGTCCACAGAACACGCGGTGCTGGGCACGACTGCTG
CCCTGGCGGTCCTGAGCCTGGCGGGGTCCGGCGGACCGTCCGGCGGACCG
TCCGGCGGGACGGCCGTCTCTTCCCGCCCCTCCTCCAGCCGGCCTAGTAC
CGGCACAGGAACACGCCAGGGTTCGTCTGACAACTGCAGTGTCATGTAA Coding sequence (CDS) from alignment at Sc0000373:43155..47553+ >transcript:BL96065_evm1 ID=transcript:BL96065_evm1|Name=transcript:BL96065_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=1365bp|location=Sequence derived from alignment at Sc0000373:43155..47553+ (Branchiostoma lanceolatum)
ATGCCGCTGGACACCGTCCTATGTCTGGACACGTCGGGCTCCATGGCGGG
AAGGGGCATGAGGGAACTCAAGAAGGCCGTCAAAGAGTTCCTTCTGGGAG
TACAGGAGACGGCCAGCAAACACAACCTCCGGGAGAATGTTGGGGTGGTG
GAATTTGGCGCCAAAACTCGCATCGTCCAACCACTCACCAATAACTACGC
CGCAGTGCTGAGGGCTGTTGACAACCTGAATGCAGGAGGTACCACACCGA
TGTTCGAGGGTCTCATGGAGGCGTTGAAGGAGGTTCTGCAGAACGGTGGT
GTGCTGGTCCTGTCTGGTCAGAAGAAGATGACCCCAAGGGTCATCCTGAT
GACCGACGGACACCCTGACGACAAGGAGAACGTCCTGAAGGCGGCGCTGT
CTTTCGGTCCGGCGGGCTGGCAGGCGGTGGGCCTGCCGCATCCCATCCCC
ATAGCCTGCGTGGGCTGCGGCGGCGACGTGGACGGAGCCCTTCTCCAGGC
AGTGGCGAAGCTGACTAACGGCATGTACGTGCAGGGGGACATCGGCCAGC
TGTCGGAGTTCTTCCGCAGACAGGTGCTCCTGATCCGTTTTGCAGCCCAG
TTCTCACACGACATGCGCCAGTTGCGGGATCTGATGGTACTGCGTCAGTT
CTTGGCCCAGATGGGAGAGAGCGTGGATGAGGAAGAACTGGTCGGACTGA
AGACCCTGCTGTTCGCCATGCTGCTGTGTGCTGCAGACGACGACAGTGAC
GACGAGGAGCAGGACAACATGCCGCCGCTGGGATCTCGCGTGCAGCGTGG
ACGGGACTGGAAGTGGGGGAACCAGGACCGACAGGGTACCGGCACGGTGG
TCCAGCACAGGTCGGACGGCAACCTTGTGGTTGAGTGGGACCATGACTCC
GCCTCCAACTATAAGTACCGGTTCGGCGCAGAGGGAGCAAGAGATGTGAG
GGTTGTGGACGAGCCACGAGTGATCGGTGCGGGCGGACGCATCATGCCAG
GGTGTCGGGTAGTCAGGGGACGAGACTGGGCTTCTCGCTACGGTGACCAG
GACGGGGGGAGGGGGAGTGTCGGCTTCGTCTACAAGGTCAAAGAAGGGGA
GGACTACAACGTGCACGTCCGCTGGCCCAACAAGCACAAGAACGTGTACA
AGTATCAGCCCAACATCAAGGAGATTCAGATCAAGGAAGAACACGCGGTG
CTGGGCACGACTGCTGCCCTGGCGGTCCTGAGCCTGGCGGGGTCCGGCGG
ACCGTCCGGCGGACCGTCCGGCGGGACGGCCGTCTCTTCCCGCCCCTCCT
CCAGCCGGCCTAGTACCGGCACAGGAACACGCCAGGGTTCGTCTGACAAC
TGCAGTGTCATGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000373 | genome | Sc0000373:43155..47553 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96065_evm1 |
| Biotype | protein_coding |
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