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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96066_evm0 >transcript:BL96066_evm0-protein ID=transcript:BL96066_evm0-protein|Name=transcript:BL96066_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=440bp
MPLDTVLCLDTSGSMNGRGMAELKKGVRQFLLGVQETANKMNLRENVAVV
EFGGGARVIQSLSGNYGTVMQSVDNLKAGGTTPMFEGLMEAMREILQRGG
VLTLPGGRKMTPRVILMTDGYPDHKENVLKAALSFGPAGWQAVGLPHPIP
IACVGCGDDVDKDLLQAIAKLTNGMYILGDVSQLSEFFRRQVLLIRFAAQ
FGHDMQRLRDIMVLRQFMANMGESVDDAELAGLKTLLLAMLLMSADDDSD
DEDDSEQSNMPPFGSRVRRGRDWKWGMQDRLGVGTVVKHRSDGQLVVEWD
YDDSTTYRYRFGAEGARDVRVVDEVRAVGSAGVKVGCRVVRGRDWQTRYG
DQDGGRGSVGAVYRVQPRETFNVHVRWPNGTKANYRYHPPNTKEIELEEH
VVVGTVTALAALRLVGAMGGDDDSPPSSPRSTKSRACSIM Run BLAST on NCBI mRNA from alignment at Sc0000373:58680..63080+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96066_evm0 ID=transcript:BL96066_evm0|Name=transcript:BL96066_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4401bp|location=Sequence derived from alignment at Sc0000373:58680..63080+ (Branchiostoma lanceolatum)
ATGCCACTGGACACGGTCCTGTGCCTGGACACGTCAGGCTCCATGAACGG
CCGCGGGATGGCCGAACTCAAGAAGGGAGTCCGACAGTTCCTACTCGGCG
TCCAAGGTAACGTACGGCTTAGCAGGTGCATGGACGGACCCTCTACCCGC
ACAACAAAGTAAATTTGTGATATAATAGGACGATTTGGCTGAGAAATAGA
ACTGTTACTACTAATTCTAATGGTCAAGTGACTCATTGATGAAGTAATCT
AGACAAGTTGTTTCATTTACAAATTCCTTGGTAAATCCCTGACTGTCAAC
GTCATCATGTGAAACTGTGAGAGAAAAGAGGACCTTATCAAACTGTAAAA
GACCGACATGTCTACTTAGCTCCTAACGTAGCTTCAGTTTTAAAACTTTA
TAAGAAAAGTGTCGCCTTTTTAACTGCCAACAGAAACCGCGAACAAGATG
AACCTCCGTGAGAACGTGGCGGTAGTAGAGTTTGGGGGAGGAGCCCGCGT
CATCCAATCGCTCTCCGGGAACTACGGGACCGTCATGCAGTCTGTTGGTA
TGTCAGAATGACCATGTTATCGGATGTATCAAGCGTTCACGCTAGATAAC
TGCAAAGACAGTATTGTAGATATGCGGGTACGTATCGTTGTAATGAAGGG
TTCGTGGTCATAAAATTGATGTGGATCTGTTTCGGTCAGTTTGTTTGTTT
GTTTGTTTATTTAACCAGGAGTTAAAATCTATCTATCGTTCATTCCTTAT
TTCCATCCACAGACAACCTAAAAGCAGGAGGGACGACACCCATGTTTGAG
GGTCTCATGGAAGCGATGAGGGAAATTCTGCAGCGCGGTACGACGGTTGG
TGTCTGTACTAGTGATGGTGTAGCGCGTCAAATTAGTCAAAATTACCTCA
GTGCTTTGATACTTGCCGTCGTAAGAAAGGGAAAAGTCGCCAGCAATTCG
ATGTGCCATTTTTGTCTTTAAAGTGTGATCTTGAAACATGAATGACTGCC
GCATGTGGTTTTAATGCTTCTTGTGAAGCTCAATAACGAACACTTTTACA
CTTTTGCCGCTAGGTGGCGTGCTGACATTGCCAGGTGGTCGGAAGATGAC
CCCACGTGTCATCTTAATGACGGACGGCTATCCTGACGTAAGACATCACA
TTCATAACAGTTAGTCTTCACTCCATACTACACAACTTACTACCTATCTC
TTCAATTTAACTTTGCGGTATCTAAGTGTCAGTCTTTTAAAAGTACCGTT
AGTCGTACGTCTTACGGACACGTTGTTCGTTGTACACAGCACAAGGAGAA
CGTCCTGAAGGCAGCGCTGTCGTTCGGTCCGGCGGGCTGGCAGGCGGTGG
GCCTGCCGCATCCCATCCCCATAGCCTGCGTGGGCTGCGGTGACGACGTG
GACAAGGTACAGATGCTGTCTGTCCTCTGCTAGAATACATATACATTGAG
TACGTCGTGCATATATGCTTATTTTCATGNTCGTGCTACTCGTGCATATA
TGCTATGTATTTTTATGTTTTAGACTATATCAAAAACTAAAATTGTAATT
GGGCAAAGTCTACACCGAGGACGCTACTGTTAAATGGATTATTCTGCTAT
TCCATCCGATGATATATACTGTTTTAGGATCTCCTCCAAGCTATCGCCAA
ACTCACCAATGGCATGTACATCCTGGGTGACGTCAGTCAGCTGTCGGAGT
TCTTCCGAAGACAGGTCGGTATAAGAAGCTGTCATCATATCTTAACCAAA
TAGACGTGATAAAGAGCAATGTCGCACTTTAAAGTTCTTTTTGCGTCCTT
ATACATGTATGCAACATATGAACTGATGCTTACTTTGATGCTCAATATCT
AGGTGCTTCTCATCCGGTTTGCAGCGCAGTTTGGCCACGGTAGGACACTT
TCCATTTCACCTGCACCAACTGTATTTAAGTACCGCGCTTCAATGAGACT
TTATCATTTATATATTTGCCAACACAGGCCTCCGTTTCGTTAACGTTCTT
TACGTATACATTCACTTCTCTCCTCAGACATGCAGAGGTTGCGAGACATC
ATGGTCCTGCGGCAGTTCATGGCCAATATGGGGGAAAGCGTGGACGACGC
TGAACTGGTAAGAGTGGTTTCAAATGTCGTAAGGGGTAGCCGGATGTACC
TAAACATGGAATTGAGCAACGGTTCTATAGAAAACATTTCGTCGACAACA
GTCGGAATCAAGGTATAAACCCTCAAAACAAGGTGTGGTGAAATGCTCAT
AATCCTCACAACTGGATCTGCGTTACGTGTAATATTTCAAAACTTAGGAC
TTTGAATATACGTTACGCTAACGTCGAGAGCACTTGATAAGGGGCTAATC
TCGAACTTCTCTTCACTATTTATTTCTTCCCCGCAGGCCGGCCTGAAGAC
CTTACTGCTCGCCATGCTGTTGATGTCGGCAGATGACGACTCTGATGACG
AGGATGACGTAAGTCAGGGCCAAATAACTCATTACATATATACTTCATTT
GGCATTATGGATTCAAGAAATCTTCTTACCACACTTACCAAATTACATGA
GATGTGGCAAGTCAAAAGCATACATAGATGATAAAGTAGTACTTACTTAT
GTGTCGTTTACAAAGAGCGAGCAGTCAAACATGCCACCGTTCGGCTCGCG
TGTTCGCCGCGGGAGGGACTGGAAGTGGGGCATGCAGGACCGTTTGGGCG
TCGGGACCGTGGTCAAGCACAGGAGTGACGGTGGGCAAAATGTCACACAT
TAACGGAAATCTCATTCAAGCTGTTTTNATATTCAAGCTGTTTTCGTATT
TACTGTCGTTGTCACAAGAAAATCTGGGAGTCAACCTTACATTTAGAATT
GTGAATGAGTAGGGATATCCTAAATGAAATGAAATGAAATTAAAATGCTG
CAATAAACTGCACAAGGAAACAGTAACTCAAGTATTACTGGAGAAAATTT
GGAAACGGTCAGACGTCTCAGACGTCATCGGCTGTCTTTCGTCAGTGGCT
AGATACCTAGCGTATCTTAGGTATCCTGGATGTATAACCTTCATCGACGC
TGCAATAAACTGTTCAAAACCTACCGCGAGTCACCACAGTTTTGCGCACG
TGAATTATATACACAGAGTCAGAGTTAAGCATGTTTCTGACGTGTGGTCA
TCCTTCCTTCCAGGTCAGCTTGTCGTGGAGTGGGACTACGATGACTCCAC
CACATACCGCTATCGATTTGGAGCTGAGGGAGCCCGAGATGTCAGGGTAT
GGACATTATCTATCCGATATAGTCTTCTTGTAAGTAGTGGTCAACGCTAG
TGAACTTGTGAACTTCACAAGAACTCACTGCATAGTCCAGAAACGTTAAA
ATTTCCAGCCAGACTATGAGATCGACCTGAGCAGCCTTGCTGCAAAACCC
AAAGCATGCGCACAAGATCTGACCCTGCATGCAGTATTTCTTATTCATGA
TGGTCAACGTAACACATGCTCCATTGCATGATTCACACGTGAATGTGTTC
TGATATCTTTCCATTCTGTGGTGCCTCTGTGTCTTCTGAAGAAGGTATAG
TGAAAGGGTCTTTCACGCTTTGGGTTCGCGCAGGTGGTTGACGAAGTACG
CGCCGTAGGGAGTGCCGGGGTCAAGGTTGGATGTCGCGTGGTTAGAGGTG
AGTAGGAGATATTCCTTTGATATCACTTTTATACAGCATGTTATGAGAAG
AACTGTTTGTTGCATTTCAAGGTCAATAGTTGAAACAAAGAGCGAACACG
TGATGTTTCAGGCAGAGACTGGCAGACACGGTACGGTGATCAGGACGGTG
GGAGGGGGAGCGTGGGAGCCGTGTACAGGGTCCAGCCAAGGGAGACGTTC
AACGTTCATGTAAGACATTTTCTTTTCATCTTCCAGTCTGAGATATCAAG
AAATTATTATTTTTGTCTCACTGCTGGTAAAGAGAATACGGATGATTTTT
CTATGTAAGCCTATTTCAAGTGAAATTCAAACAAAAGCATCATTATCCAA
TACTGTTCTCTCCGAGATCACTTTCACTGTCCTCTTACTCTAGGTCCGAT
GGCCCAATGGAACCAAGGCCAACTACCGCTATCACCCACCCAACACAAAG
GAAATCGAGCTGGAAGGTATGTAAGATTCCAACTGTGAAGTTTTTCTATT
TAAAGACTATAGGTAAGAGAATTGTATCACGATGAGTGAAACGGTCCTTG
TCGTAAGTGGTGATGGTTATGTAGATAATAGTTTGAATGATTTTCAATAA
ACTATTTGTCCTCTACGTTTTAGAACACGTTGTTGTGGGGACTGTGACTG
CCCTGGCTGCCCTGCGCCTGGTCGGTGCCATGGGAGGGGATGACGACAGT
CCGCCGTCTTCACCCCGGTCTACAAAGTCTCGCGCGTGCAGCATCATGTA
G Coding sequence (CDS) from alignment at Sc0000373:58680..63080+ >transcript:BL96066_evm0 ID=transcript:BL96066_evm0|Name=transcript:BL96066_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1323bp|location=Sequence derived from alignment at Sc0000373:58680..63080+ (Branchiostoma lanceolatum)
ATGCCACTGGACACGGTCCTGTGCCTGGACACGTCAGGCTCCATGAACGG
CCGCGGGATGGCCGAACTCAAGAAGGGAGTCCGACAGTTCCTACTCGGCG
TCCAAGAAACCGCGAACAAGATGAACCTCCGTGAGAACGTGGCGGTAGTA
GAGTTTGGGGGAGGAGCCCGCGTCATCCAATCGCTCTCCGGGAACTACGG
GACCGTCATGCAGTCTGTTGACAACCTAAAAGCAGGAGGGACGACACCCA
TGTTTGAGGGTCTCATGGAAGCGATGAGGGAAATTCTGCAGCGCGGTGGC
GTGCTGACATTGCCAGGTGGTCGGAAGATGACCCCACGTGTCATCTTAAT
GACGGACGGCTATCCTGACCACAAGGAGAACGTCCTGAAGGCAGCGCTGT
CGTTCGGTCCGGCGGGCTGGCAGGCGGTGGGCCTGCCGCATCCCATCCCC
ATAGCCTGCGTGGGCTGCGGTGACGACGTGGACAAGGATCTCCTCCAAGC
TATCGCCAAACTCACCAATGGCATGTACATCCTGGGTGACGTCAGTCAGC
TGTCGGAGTTCTTCCGAAGACAGGTGCTTCTCATCCGGTTTGCAGCGCAG
TTTGGCCACGACATGCAGAGGTTGCGAGACATCATGGTCCTGCGGCAGTT
CATGGCCAATATGGGGGAAAGCGTGGACGACGCTGAACTGGCCGGCCTGA
AGACCTTACTGCTCGCCATGCTGTTGATGTCGGCAGATGACGACTCTGAT
GACGAGGATGACAGCGAGCAGTCAAACATGCCACCGTTCGGCTCGCGTGT
TCGCCGCGGGAGGGACTGGAAGTGGGGCATGCAGGACCGTTTGGGCGTCG
GGACCGTGGTCAAGCACAGGAGTGACGGTCAGCTTGTCGTGGAGTGGGAC
TACGATGACTCCACCACATACCGCTATCGATTTGGAGCTGAGGGAGCCCG
AGATGTCAGGGTGGTTGACGAAGTACGCGCCGTAGGGAGTGCCGGGGTCA
AGGTTGGATGTCGCGTGGTTAGAGGCAGAGACTGGCAGACACGGTACGGT
GATCAGGACGGTGGGAGGGGGAGCGTGGGAGCCGTGTACAGGGTCCAGCC
AAGGGAGACGTTCAACGTTCATGTCCGATGGCCCAATGGAACCAAGGCCA
ACTACCGCTATCACCCACCCAACACAAAGGAAATCGAGCTGGAAGAACAC
GTTGTTGTGGGGACTGTGACTGCCCTGGCTGCCCTGCGCCTGGTCGGTGC
CATGGGAGGGGATGACGACAGTCCGCCGTCTTCACCCCGGTCTACAAAGT
CTCGCGCGTGCAGCATCATGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000373 | genome | Sc0000373:58680..63080 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96066_evm0 |
| Biotype | protein_coding |
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