|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96079_evm0 >transcript:BL96079_evm0-protein ID=transcript:BL96079_evm0-protein|Name=transcript:BL96079_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=151bp
MPRVRHAGSPARGAGPGRAGTPGRGQGTPAGGRGPTAGQAGAPSPRKRRR
FRPGTRALMEIRKYQKSTALLLRKLPFSRVVREVCQEVGGADFRWQAYAI
MALQEAAEAFLVGLMEDANLIALHAKRVTLMPRDIQLARRIRGPEKGFAS
L Run BLAST on NCBI mRNA from alignment at Sc0000404:128613..132725- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96079_evm0 ID=transcript:BL96079_evm0|Name=transcript:BL96079_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4113bp|location=Sequence derived from alignment at Sc0000404:128613..132725- (Branchiostoma lanceolatum)
ATGCCAAGGGTACGGCACGCGGGAAGTCCGGCCAGGGGAGCGGGGCCAGG
ACGGGCCGGGACGCCGGGCAGAGGACAGGGAACTCCCGCCGGTGGGCGCG
GGCCGACTGCGGGACAGGCAGGGGCCCCTAGCCCAAGAAGTGAGTTGAAA
AATCCAATATCATGATCACTGAAGCCATAGAATTCAGACTGATCAGTGTT
GGATAGTTATCGTTTCTTTGTGCTTTTGTAAAAAAAAAAATATTTTGTTG
TTGTTCGTGTTTTATGTTTTTAATGTCTAACGCCGCTAGACATGGGCGCA
AGATGCCTCTTGTACAAATGTACTAGCTAGTCTTGGGTGTTAATGTTATC
CTGAGTAAATTTTGTTGTTTTACTGCGAAGCAAGAAAGAAGAAGAAGTAA
TCTCATAATTTTTTTGTTGCTGTCCTTGGTTAACCAAGCAGGTTAACCTC
CTTGGTTTAACGTCTATTATATCGCTAGACGTGGTCTAATTTGCAAATAT
GGTAATCTTTACAATCACAGAGAGGAGGAGATTTCGCCCTGGGACAAGAG
CACTGATGGAGATCCGGAAATATCAGAAATCCACAGCACTTCTTCTCAGG
AAGTTGCCTTTTTCAAGAGTGGTAAGAAGAAAAATATATAACGTTATATA
CAAGATAGTATTCTTCATCACAACTAGATGATATTACTGTTAGTCCTAAC
AGTAATAATTAAGGGTTAATGACCCGCCCCGAGGTGTATATGGTGTCATA
ACGCCTGGCCATGTGCTATAACCACCGAATAAAACCACCGAGTGAGCGAA
GTGAACGAGGTGGTTTTATGAGGTGGTTATAGCACATGACCAGGCGTTAT
GACACCATATACACCGAGGAAGAGGCGGGTCATTAACGTTATTATCATAT
AGCTTATCCAAACTGACGCATATAAGAGTAGACAATTTCTGTTTGACGCA
TAGATCCCTTATACTATTAAGAATGCATTTCAGAATTCACATTTGTCCTT
TTTTAACAGAAGATGATGAAGAGTATGTACAACTGTTGCCTGATTTATTT
ATTTCAACCACACAGGATAGGAGGGTCGGTTTCAGGTCAGTCAGAAAATG
TTATGATTGTATATATTGAAGAATCTCCCTGCAACAAGACCTCAGGTAAC
CTGAATAGAACACAGGTTCTTTGGCCAGCAGGAAATGGAACGCGCGGAAC
CTTAGATAGAACATGGTTTCTTTGGCCAACAGCAAATGGAACACGCGGAA
CATTTTTGGGAATTTTAAATTTGTTTTCCCTTTTTCATGTATTCTAAGGA
AATTTTTAGGAATTCTAAGACAATGAAGATTCTTTTAAACAAGGTTAAGA
AAAAGATTCATCAAATAGATACCCCCTCTACAAAATGCAATGGTTATAAA
GATTTTTTAAACAAGGTTAAGAAAAAGATTCACCAAAAAGATACCCCCTC
AACAAAATGGAACGGTTGTGTTCTGACATGACGTCAAGAAGTGGTGTGTT
ATGGCGTGATAGCAGACCACTTATTGTGGGCAATGGAGGCTTCTGATTGG
TCGACGCCATCTACCTATGTGATAATAATAGATAATATACTAAAACCAAA
CTTTAAAAAAGACTTTATCAGTATTCGAAAAAGAGTAGGGGCATGCCCCG
GTGTGCGATGGTCCAAAGTTCTCCAAACCCTTCTGTCTGGAGTTGGTGAT
TCACTACAAATCACCCTGATGGAGGCCTGGCAAACCTCCGTCTCATATCA
GCCATACGGTGATTTACACCATTCACCCAGATGGGCTCCCTTGGAAATCA
GTTACATAGTTAACTGAAGGGACCACCCTAAAGATTAATGATAATAATAA
TAATTATTATTATGCTGCTGCAATTTGTTGTAAAACTAGATCCCACATGA
AATTATATTGAAATTGACTCAGTTTCTTTGTCAGTGATAATTGACCGTAC
TAACACAATTGCAAGATAGAAAAATTGTCTTTGCAATAGGATGAGTTTGT
AATGAGAGGTCACTGAAAATAGCAAACATAAAACCGAACCAAATATCTTA
TTTTCATGATTTCCCCAAACTTCACTTCTTCTCCCTTCCCACTCCAGGTG
CGCGAGGTTTGTCAGGAGGTTGGAGGAGCGGACTTCAGATGGCAGGCCTA
CGCCATCATGGCTCTACAAGAGGTAATGTTAGCTTAGTCTGTATAACGCA
AACTCCAGCTGTCCGGGGGTTTCTCTCCCCTCCTTGGGTTGTGAGGCGGT
TACAGGGCGGCGAGCGGTCACAGGAGGCTTGATTGAATTCAAGCTAATGT
TAGCTTATCTTCAACATACTCAGTACCTAGCTTTCTGTCACAAGCTTTGG
GGTAAGTAAGGTAAAATGGCTGATTCTGTTGGCAGAATTTTAAAGTAGCA
AGTCAATTCTTTACATCTTCGGTATACATTGTACATAAAATCTAAGCCTA
AACGCATAGAGTCCATATGCATCCTATTCTAGCTCCAGTTTGCTCCTCTG
ATAGCTTTCCCACAGAATTCTGTCTCCTGCCTGATTTTATTATTCTCTAA
GCAGAGGTTTCGGTCGAGTAGGGTAGGAGTTTCCTTGAAGGCAGAGGGAC
GTTAAAAATCCTGGACACTCCTACCCTCCTCGGCCGAAACCTCTGCTTGG
AGAATATGATTTCATAGCCTGCTATACCTCTAGATCATGCCTCTGGTCTC
TTCTCCACAGAATAGTTTGGCCGCCAACACATGACAAGAGTAGTACATGT
ACTAGTACTCTAGTACATGTAGTATCCATTACACAATGCTGATGGGGTCC
CTGACACATGCAGGGGTGGGAAGCAGTCCGCTAGTCTTCACACACTGCCT
ATAAGTTGCTCTGTCCAGGGGGTTTACGCTCATTAGGCCGCACATCTTAT
GTTGACTAGCATTCTGTACGGAACTGATCAGAGGAGCAGACTAATGTTCT
CCCAGCAGATGTTGGGTAGAAAGTTTTCTAATCGGCTGGTTTTCCTGACA
GTACTCAACCCTAGCCTGAATTCAATCAAGCCTCCTGTGACCGCTCGCCG
TCCTGTAATCGGCTCCCAACCCAAGAGCTTGATGGCTTGGGCTGCTAATT
CAAGGGAATCCTCCTTTCTAAATATGGATAATCTAAGCAGCTGTCATCAG
CCCACAGAGCTGCCTGCCCAGGCCAGACTCTAGTTGCTAAGGATCTATTG
CTGTTGCTATCCAGTGATTGACAGCTGCAGATGCCTGATCTGCAGGTGGT
AGGAAGAGAGTTTCACAGGCCGTTTCTCTGTACTTTGAACATTTTTCGGC
AGTCAAGTCTTTTCTTGTTGGATTTTCAAACTTGGTTTTTGATGTGGGAG
AAACTGACATTGTCTGCCTCTAAAGGAACAGATAAACTAAAGGAGGTTTA
AAATCCCTTTTAACAGGCTTGGATACATCTCATTTCTCACCCTCCCAATA
TCTGGATCTCATTTCCCATCCCTTCCTCCCCATCTACCTGTGGTGCCAGT
GGTGCCAGCTAACAGACATGCTAACTAGCTGGCAATGGGGACCTGGCTGA
AATCATGGCCTCTGATTGGTGTTATTATTTTTGATAACAGCTCTCCTGGC
TTAGAGCTAGTCGAGCACAAACTCCGCGGGGAGGGGAGAGAAACCCCCGG
ACAGCTGGAGTTTGCGTTATACAGACTATACTCAACCCCAGCCGATCAGA
AAACGTGACCATTTTCTACCCCAACATCTGCTTGGAGATTATATGCCAGA
GCTAAAATAGGATAGATTTCAGGCTACTTTTACAGCTTTTGTTGTAAATT
GTAATGCTGTAGGGCTGTTAGGATTAGGATTTTACCATGGTCAATACTGA
CCGACGGAGGCCATATGTAATTGGTAGACGATCTACGGCACGGCAGTACA
GTATTTCCACCTAACAGTGGCCTAAGAGAAAATGACTAATGAGGCCGGAT
GTCTTTTGATTTTCTTCTCCAGGCAGCAGAAGCATTCCTGGTTGGGTTGA
TGGAGGATGCTAACCTGATCGCACTTCACGCCAAGAGAGTCACCCTCATG
CCCAGGGACATCCAATTGGCCAGGAGGATTCGGGGGCCGGAGAAGGGCTT
TGCTAGTTTGTAA Coding sequence (CDS) from alignment at Sc0000404:128613..132725- >transcript:BL96079_evm0 ID=transcript:BL96079_evm0|Name=transcript:BL96079_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1824bp|location=Sequence derived from alignment at Sc0000404:128613..132725- (Branchiostoma lanceolatum)
ATGCCAAGGGTACGGCACGCGGGAAGTCCGGCCAGGGGAGCGGGGCCAGG
ACGGGCCGGGACGCCGGGCAGAGGACAGGGAACTCCCGCCGGTGGGCGCG
GGCCGACTGCGGGACAGGCAGGGGCCCCTAGCCCAAGAAAGAGGAGGAGA
TTTCGCCCTGGGACAAGAGCACTGATGGAGATCCGGAAATATCAGAAATC
CACAGCACTTCTTCTCAGGAAGTTGCCTTTTTCAAGAGTGGTGCGCGAGG
TTTGTCAGGAGGTTGGAGGAGCGGACTTCAGATGGCAGGCCTACGCCATC
ATGGCTCTACAAGAGGCAGCAGAAGCATTCCTGGTTGGGTTGATGGAGGA
TGCTAACCTGATCGCACTTCACGCCAAGAGAGTCACCCTCATGCCCAGGG
ACATCCAATTGGCCAGGAGGATTCGGGGGCCGGAGAAGGGCTTTGCTAGT
TTGTAAATGCCAAGGGTACGGCACGCGGGAAGTCCGGCCAGGGGAGCGGG
GCCAGGACGGGCCGGGACGCCGGGCAGAGGACAGGGAACTCCCGCCGGTG
GGCGCGGGCCGACTGCGGGACAGGCAGGGGCCCCTAGCCCAAGAAAGAGG
AGGAGATTTCGCCCTGGGACAAGAGCACTGATGGAGATCCGGAAATATCA
GAAATCCACAGCACTTCTTCTCAGGAAGTTGCCTTTTTCAAGAGTGGTGC
GCGAGGTTTGTCAGGAGGTTGGAGGAGCGGACTTCAGATGGCAGGCCTAC
GCCATCATGGCTCTACAAGAGGCAGCAGAAGCATTCCTGGTTGGGTTGAT
GGAGGATGCTAACCTGATCGCACTTCACGCCAAGAGAGTCACCCTCATGC
CCAGGGACATCCAATTGGCCAGGAGGATTCGGGGGCCGGAGAAGGGCTTT
GCTAGTTTGTAAATGCCAAGGGTACGGCACGCGGGAAGTCCGGCCAGGGG
AGCGGGGCCAGGACGGGCCGGGACGCCGGGCAGAGGACAGGGAACTCCCG
CCGGTGGGCGCGGGCCGACTGCGGGACAGGCAGGGGCCCCTAGCCCAAGA
AAGAGGAGGAGATTTCGCCCTGGGACAAGAGCACTGATGGAGATCCGGAA
ATATCAGAAATCCACAGCACTTCTTCTCAGGAAGTTGCCTTTTTCAAGAG
TGGTGCGCGAGGTTTGTCAGGAGGTTGGAGGAGCGGACTTCAGATGGCAG
GCCTACGCCATCATGGCTCTACAAGAGGCAGCAGAAGCATTCCTGGTTGG
GTTGATGGAGGATGCTAACCTGATCGCACTTCACGCCAAGAGAGTCACCC
TCATGCCCAGGGACATCCAATTGGCCAGGAGGATTCGGGGGCCGGAGAAG
GGCTTTGCTAGTTTGTAAATGCCAAGGGTACGGCACGCGGGAAGTCCGGC
CAGGGGAGCGGGGCCAGGACGGGCCGGGACGCCGGGCAGAGGACAGGGAA
CTCCCGCCGGTGGGCGCGGGCCGACTGCGGGACAGGCAGGGGCCCCTAGC
CCAAGAAAGAGGAGGAGATTTCGCCCTGGGACAAGAGCACTGATGGAGAT
CCGGAAATATCAGAAATCCACAGCACTTCTTCTCAGGAAGTTGCCTTTTT
CAAGAGTGGTGCGCGAGGTTTGTCAGGAGGTTGGAGGAGCGGACTTCAGA
TGGCAGGCCTACGCCATCATGGCTCTACAAGAGGCAGCAGAAGCATTCCT
GGTTGGGTTGATGGAGGATGCTAACCTGATCGCACTTCACGCCAAGAGAG
TCACCCTCATGCCCAGGGACATCCAATTGGCCAGGAGGATTCGGGGGCCG
GAGAAGGGCTTTGCTAGTTTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000404 | genome | Sc0000404:128613..132725 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96079_evm0 |
| Biotype | protein_coding |
|
