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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96111_evm0 >transcript:BL96111_evm0-protein ID=transcript:BL96111_evm0-protein|Name=transcript:BL96111_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=441bp
MRKLLFLFLGVMVVFLPAPTDSHCTKERCSVESKLQTCLCAETHYDVRRL
HKSVWVSTTVWDLSLISGKVRAKRKLNKYLKGHNSEGLKISNQLPLVTQS
YVPTDLREVTVSYPLPEELWNNPPMPKDPRVVLDVVPETIMYVRPFPAGF
QGFVADREAKSFINTLTDHGEPIISKDDYYFIFQYGSDNPGTVKNEIAVF
AINTILDEFYRDMEDYPLHLPTFLRGQEIKWSTEGASINVDLVRQECGTT
FCTDPECPKYTVKKDSDGVETRKYGTLGTILFQGAPTCYAERTHQLTQPG
IYQVLKENGLAAGRNFSRLSPLATRVAQKEPWRNGCSRYYYSVYALREAE
AAQISTGTFNIQWGGRTMGEITKLTFGNLTVDVMCFGGYGEPDKSFAVGR
RLSDHVAGKPTCRDALFIPEYNVQSRLFDRHNERRRPRYDH Run BLAST on NCBI mRNA from alignment at Sc0000534:60989..67681- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96111_evm0 ID=transcript:BL96111_evm0|Name=transcript:BL96111_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=6693bp|location=Sequence derived from alignment at Sc0000534:60989..67681- (Branchiostoma lanceolatum)
ATGAGGAAGCTGTTGTTCTTGTTCCTCGGCGTGATGGTTGTGTTCCTGCC
AGCACCAACAGACAGCCATTGGTATGTTCAACCTAAAGCTTCCCTCCCAC
TGGACCCGCGGCACGCTGGCGGCATCGCTGCGTCCTAAACTGGATTAGTG
TTACCCTTGACTTTATAATGGGAATATCATTCAAAATGAACAAGTATGAC
CAAAAAGACAACAAAACACACAAAGCTTTGTAAAAATATTAGTTTTTTGT
CCATAAAATTCGTTGAGCGCTTTGCCAATTCGATCGGCCGCAGCGACGCC
GCCAGCGTGCCGCGGGTCCAGAGAGAGGGGGGCTTCAAGCGGGTATTTCA
CTGGACTGCGTCAAATTGCGCTAGAAAATTGCGTCAACTTTGCGAATTTG
GTCCAATTTTCCCTTGCGTTCACACTGACGTTGGACTAGCCTGTGTTTAC
AAAAGCTCTCGGCCGGAGGTTACTGACCCCCAGCCGTTACAGGACCGGCT
AGCCACTAGGAGCGCGATTCGTCAGGCTAACGTGGGACGTGCTGGTACAA
TACGTGACTGGTACAATACGTGACCTAAACAAACAAGATGGCCGCGCCAG
TAATGTCACATTCTTAGTTTTGGCTCCAATCAAAGATACATAGATGATTT
CATTTGAAACCCGCAGTATTGCCACTGACTTAAAAATGAGTTGATGTACA
ATGATTAGAAAGTTATCAAAAGACATCTGCAGTTTTGCACCGCTTTGTAC
CATTTTGCGTCCATTTGCGTGATGACAAATTTAGCCGGTTTGCCAATGCC
TGGCGCAATTTGACTCACAGTGCACGAAATGGCCTCGGATCCTGACGTAT
CCTGAAGTATCCTGACGTATCCTGAAGTATCCTGACGTGATACGGAACCT
AAGATCCGGAAGAATCCGAGCGGATCCGGGGCCGTTTATTTCTCGTCAGG
CTAATGCGCATCCAAATATTGGGACTCAAAGTACACAACACAACTTGTGT
AAGTACGCACTTACACAACTCAAGTATGCAACTGGTACCTTGAGTTCCAA
TATTTGGGTGGGTTATATACATTACGTTTTCGACAATGCATTCTTATGTG
TATGAAATCAGTTTTTGCTAGTGTTTAGATGTTTCATTGGACGCTTATTA
TTATCAATATGGGCTGATTTAACCGATATAGTCTGTATTATTTCTTTTCA
GCACCAAGGAGAGATGCTCTGTGGAGAGTAAGCTGCAGACGTGCCTGTGC
GCAGAAACTCATTATGACGTGAGGCGCCTACACAAGTCTGTCTGGGTTTC
CACCACAGTCTGGGACCTGTCCCTGATAAGTGGGAAGGTGCGAGCCAAGC
GGAAGTTGAACAAGTACCTAAAAGGCCACAACAGTGAAGGTATTAAGGCA
TATATCGTATTTCTAACTCTTTAATTAATAATTTCTATATTTCTATATGA
AGAGATAAATGTGAGGTAAAGGTGAACATTGTTCGACATATATTATGATG
CAAAACGGGATATCACTTGTAAGACTGGTAAGAAAAATATATACTAGATA
ATGTTCTTCATTACAACTAACCTCAATTAGGCCATGTTGATTCTATCATA
TGGATGATATCCTCTAGCTCGGAGGACCCAAAACTGATGCGACCGTGCGA
ATGAAAAAAAGTTTGGCATTCACGTTCTTCTGTTGAGTCTCAGTTGAGTG
ATGTTTTCTTCCAGGGTTGAAAATATCCAATCAGCTACCGCTGGTGACGC
AGAGCTATGTCCCTACTGACCTGAGGGAAGTTACTGTGTCTTATCCTCTT
CCCGAGGAGCTGTGGAACAACCCGCCCATGCCCAAGGACCCGAGGGTAAG
ACGTTTGTTTATATCACTCAACAGAGACGGCGGGCGGTACAAACTTCCTT
GCCAGTTTTGACCCCTTGCTGACGCCAAGTATCTTTAATGCCTCGTGATC
TAGGTGAAAGGTCAGATAATCGACCCCCCCCCCCCAACCCTAATGTTTGA
GGGGAATCTACTAGTTAATCATGTTCCTACATGCGGTAGATAGGCAACGT
GATTGGCTGGCGACAGCACGTGGGGGAGTATTTGATTGGCTGACAGCTTG
CCAGCTTTAATGCAGTGAGAATCCCTAAACTCAGGCCGGTACGCCAGGGA
CAAAGGACGTTGTTTGTCACATACACGAGAGAAGACCTAGCACTGAAAGG
ATGGTCTATAACAAGTATGACTAAATCTTGATTCAAATCACATTTCTAAC
AGGTCGTCCTTGACGTAGTGCCGGAGACTATCATGTACGTGCGCCCTTTC
CCGGCCGGGTTCCAGGGCTTCGTGGCCGACCGGGAGGCAAAAAGTTTCAT
CAATACACTGACCGATCACGGAGAACCAATCATCTCAAAGGATGACTACT
ACTTCATATTCCAGTATGGCAGGTAGCCTTTAAAACTTCAGACTTAAGAT
TGATATTTCGGCATCGATTGGACCCAACACTACTTTTGTATGATACTTTC
AATGTAACTAGAGCTTGTTGGATATTTGTCACAGGAAGGGTATCGTCACT
AGGTAATTCTAGACCACGCTTAGAGTCTCATATATATATATATATATATA
GAGAGAGAGAGATTTGCAGAAGTTATAATTGTGATACCTGCGTATACCGA
TTGAACTCTACAGATGCAGACTGTGGGGACTAGTTGGAGGCCAATTGAAA
ACTAAGACGTCCAGTTTAACTTTTCATATGAGCATCCTACTAAAAACATA
GTTATGCAGAAATAGATAGAACAATGAATAGATACATTCCAATAATGAGT
TTCAGAGCAATAACTTAGTTCCATGGCTTGATTTGTCGTAAATTTGTACC
ATTCTAGCGTCGCCTCGACCGAGTGGCTAGGCTAGTGGTTTGATTCTTGG
CATTACTGTGTCATTGGGAAAGACTTAACACACACCTCACTCTTCCCAGG
TGTTAAAAACAGTAGCTGACTTCAGTTGGGATGTAAAAGGTGGTGGAAGA
AGAGGGATGGGCTCCGCCTAGTCACAATAGATAATACTAGTACCCCACTG
CCATTACGATCTTCAAAAGGACATGGGGCCACCTTTAACTTTTTTATGTT
GGTTTCTTAGTTGATTCGTTCCATGATTGGTTGTTTGGTGTTTTTTTGTT
TTTTTTTGGTTGGTGTGTTGCTGCATTAGGCAATAGGATAACGAAACACG
TATGAATGATTTTCGATTTTAAAACCTTTTCAGCGACAACCCTGGAACCG
TGAAGAATGAAATCGCCGTCTTTGCCATCAACACCATTCTGGACGAGTTC
TACCGGGACATGGAAGACTACCCGCTTCACCTGCCAACATTCCTGCGGGG
CCAGGAGATCAAGTGGTCGACAGAGGGCGCTTCAATCAACGTGGACCTCG
TGCGACAGGAATGCGGAACGACGTTTTGCACAGGTCAGTACATACTTTCT
TTCGTTCGTTCGTTCTTCCAGAGCCTTGCAGTGCCTAGTAACACACAGGG
CAGCACATTTCCTTGCTGTTTCAGTAGCAAGGTGTGCTTTATTAGTTGCA
ACCCTTTAACGTGCTCGAGGCACCTCCTCGAACAGGAGACCTCCATTTTA
CGTCCCTCCCGAAAGACGGGTGCAATCTCAACCAACATGCCTCTTCTAGG
ATTGAGCCGGGGTCTCCCAGTTACGTACTGATTGGAACCAGAAACTCAAC
TGTGACGCTGCTACCAACTGAGCTAATGGGACAACCTCGATCAGTACAAA
CATCCATGCTTTGCGTACTAGCATATCGTGTATTTTGGGGTACAAGAATT
GTAAGGCGTGCATTTCTTCTCAGGTACCTCCTGCACTGCTAATATCATTC
ACGAATCGCGAGACAAGAAAAACCTATTATAATTTCTTTTAACATAACAT
AACATAACATAACATAACATAACATAACATAACATAACATTACAGACACT
ATACTGCTATTTCTTTTCTTGACAGATCCTGAATGCCCAAAATACACCGT
AAAGAAGGACTCCGATGGTGTGGAGACTCGCAAATACGGGACCCTTGGAA
CGATTCTGTTTCAGGGGGCGCCGACATGCTACGCGGAACGGACCCATCAG
CTGACACAACCCGGTATCTACCAAGTGTTGAAAGGTACGATCTGTTGTAG
ACTCTGATAGGACGGACAGTGAATTTCACATGTGTCAGATCAGTCTCTGG
TAAAATAACGATCACAGATACGTTATCATGAAAGTTTGTTTGTGTTATTA
CTAGATATGATAAGACTGGATTAACCAAATTTTGGACACTTACGTCCTCT
GGACGTCTTTAGATAACTGAGAGGAGTGAAATGATAAGGATCCAGTAGCC
TCCATTGAATCGCCACGGGGCTGATACCGACTGCCAATCACGGTGACCGT
TGTTCCGCTTAATGCGTCGGTCACATTTGCACCGTTGCCCGAAGGGGGTG
TAGTCCCGACCGGGCCCCGAAGCCACAAATTAGTCCCGGTTGACTGCCTG
GTACCGGGTGGTACCTCTAGCCGTTCGCACAACTAGCTCACGGCGTATAT
TTGTTACGGGGTCCCGGGTTGATTTTAGGTCCGAGTTAAAGTAACCCCGG
GGCCCGGCCGTGCCAAAAATAGCCCGATAGCCGCAGGGTGTCCCACGAAA
GTGCAAAAAAAGAAGCCTGTAAACTACCCAACGGGGCCCCTTGAGCATAA
GCAGTGTAGTGGTTGGTAATACGTGACACTTCCGGTAGGTTATATGATCT
TTGCAGATCCTCGTTTACCCTAAAGAATACCAGAGGACTGTTCGAAAATC
TGGTCACCGATTTGATTTGATTTATTTGGCTAACGGTAAAAGCTGTCATA
GGAAATAACACGCGCCGAATTACTGAATTTATGTGGTCTTCGATCTCTAG
TCTTGACTTGAAATGCAATAATATGAATAAATAAAAACATGAACATCCGT
TTATGATCGTTTGTTTCCCCCCACTTTCCTTTTGGGTTGTAGAAAACGGT
CTAGCTGCGGGTAGAAACTTTTCCCGCCTCAGCCCACTAGCCACACGGGT
TGCCCAGAAGGAACCGTGGCGCAATGGCTGCAGCCGTTACTACTACTCTG
TTTATGCATTGCGGGAGGCTGAAGCTGCACAGATATCTACAGGGACGTTT
AACATACAATGGGTACGTGTTGTATTAAAAGTTCATTTATACATGTACAG
TATATAGATATTGTAATCGGTATTGCTGAAATGCCAAAATAGAGTTTTAG
CATGAAATTTCAAATTTGTCGGTACATAGAAATATAAAAAAAGAATATTA
CTTTGCTCCAAGACAAGAATTGCGACTCATCAAATTTTCAACCAGACCTC
TGGTTTTCTTCTCCCTTGAGTACCGGGTCCATGTGTGTACCGGCCTAGAC
CACCAGCCTTCCTTGAACAGAGACGGGGGCTGGCACAGACTTCCGATCAC
CTTTGACCCGGTGTTCACGTCACACTTTCAGAAAGGGGCATGCACTGTGT
GACATGGTACTCAATTATCTTGAAGAAGACCTGGTGGAAAATTTGTTGAG
TCGTTCTCCTTGTGTGGGAGTTATTGAGCAAATTATTAAACAAGCCGCTT
AGGGATTTATACTATTTCATTCTGGCTCCATGGCCCAAAGCCATCTGTCA
CCAAAATACATTAACCGGAATTTCCTTTACAGTACCTTTAACAGCCGCAA
TGAGGGCCACAAGCAATGTGCATCTTCAGTGTCGCACGGCCACATTCCAA
ATTTTATCACAAGAAAACCACGGAAACTCATCAAACTTTTGTCCGCGTTC
GTACATTGTTACAAATACGCGCACAGTCACAGAAAACAATACCTCCTTCA
CGGAGGTCATAAATGATTGGGGCTTTGGAGAAGAGAATGTGATATAGCAT
TCTCACATCAGAAGGAGAACATACATCCGTCTACAATTTTCAGACTGACT
TCTTCTATACACTTTTTGCAGGGTGGACGCACGATGGGCGAGATTACGAA
ATTAACCTTTGGCAATTTGACCGTTGACGTCATGTGCTTTGGAGGCTATG
GAGAACCAGACAAGTCATTCGCTGTTGGCCGTCGTCTGAGTGACCATGTG
GCGGGAAAACCAACCTGCCGCGACGCCCTCTTCATTCCCGAGTATAACGT
GCAGTCTCGGCTGTTCGACAGACACAATGAGGTAAAATTATCTGGCTAGA
AGTTGAACTGTCATTGCCAACAAACACAACATTTTCTACTGATCAACCCC
AGTCTTTGTCAAGGCATGAGCAATCCACTACTTCTGTGACGTCACATTTT
AGCAGATACTAGTAGAACTCGTGACTTGGTGAGCAGTTTAAGTTACAAAA
AGTCTATGGCGCACCCCGGCCGTGTTGACGGATGGTTGGCAAAGACTAGG
GTTAATTAGTCGAAAATTTGGGTCAGTCCAATTTTAGTGTGTTGGCTATT
ACAGTTCAGCTTTGATCCAATATGACTTCTACCAACGCAGATATAATTCA
AAGTGCCGTTTTTCTATCATGTCTTATTGCATCCTTAAGTCATGATACAC
CCCATCCTAGTGGGTAGAGATCTTCATCTACATGGTCGCGGGTTCCTGAC
CGAGTCACACCCAGTACTATCAAAAAGTATTCCATGTACATTTTGATTAT
GCCCCCTTTCCGCCAGAGGCGGCGACCGCGCTACGACCACTGA Coding sequence (CDS) from alignment at Sc0000534:60989..67681- >transcript:BL96111_evm0 ID=transcript:BL96111_evm0|Name=transcript:BL96111_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=1326bp|location=Sequence derived from alignment at Sc0000534:60989..67681- (Branchiostoma lanceolatum)
ATGAGGAAGCTGTTGTTCTTGTTCCTCGGCGTGATGGTTGTGTTCCTGCC
AGCACCAACAGACAGCCATTGCACCAAGGAGAGATGCTCTGTGGAGAGTA
AGCTGCAGACGTGCCTGTGCGCAGAAACTCATTATGACGTGAGGCGCCTA
CACAAGTCTGTCTGGGTTTCCACCACAGTCTGGGACCTGTCCCTGATAAG
TGGGAAGGTGCGAGCCAAGCGGAAGTTGAACAAGTACCTAAAAGGCCACA
ACAGTGAAGGGTTGAAAATATCCAATCAGCTACCGCTGGTGACGCAGAGC
TATGTCCCTACTGACCTGAGGGAAGTTACTGTGTCTTATCCTCTTCCCGA
GGAGCTGTGGAACAACCCGCCCATGCCCAAGGACCCGAGGGTCGTCCTTG
ACGTAGTGCCGGAGACTATCATGTACGTGCGCCCTTTCCCGGCCGGGTTC
CAGGGCTTCGTGGCCGACCGGGAGGCAAAAAGTTTCATCAATACACTGAC
CGATCACGGAGAACCAATCATCTCAAAGGATGACTACTACTTCATATTCC
AGTATGGCAGCGACAACCCTGGAACCGTGAAGAATGAAATCGCCGTCTTT
GCCATCAACACCATTCTGGACGAGTTCTACCGGGACATGGAAGACTACCC
GCTTCACCTGCCAACATTCCTGCGGGGCCAGGAGATCAAGTGGTCGACAG
AGGGCGCTTCAATCAACGTGGACCTCGTGCGACAGGAATGCGGAACGACG
TTTTGCACAGATCCTGAATGCCCAAAATACACCGTAAAGAAGGACTCCGA
TGGTGTGGAGACTCGCAAATACGGGACCCTTGGAACGATTCTGTTTCAGG
GGGCGCCGACATGCTACGCGGAACGGACCCATCAGCTGACACAACCCGGT
ATCTACCAAGTGTTGAAAGAAAACGGTCTAGCTGCGGGTAGAAACTTTTC
CCGCCTCAGCCCACTAGCCACACGGGTTGCCCAGAAGGAACCGTGGCGCA
ATGGCTGCAGCCGTTACTACTACTCTGTTTATGCATTGCGGGAGGCTGAA
GCTGCACAGATATCTACAGGGACGTTTAACATACAATGGGGTGGACGCAC
GATGGGCGAGATTACGAAATTAACCTTTGGCAATTTGACCGTTGACGTCA
TGTGCTTTGGAGGCTATGGAGAACCAGACAAGTCATTCGCTGTTGGCCGT
CGTCTGAGTGACCATGTGGCGGGAAAACCAACCTGCCGCGACGCCCTCTT
CATTCCCGAGTATAACGTGCAGTCTCGGCTGTTCGACAGACACAATGAGA
GGCGGCGACCGCGCTACGACCACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000534 | genome | Sc0000534:60989..67681 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96111_evm0 |
| Biotype | protein_coding |
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