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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96192_cuf4 >transcript:BL96192_cuf4-protein ID=transcript:BL96192_cuf4-protein|Name=transcript:BL96192_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=464bp
QKQSGLPHWCVYIGWVLVFLSATGSAFFVILYSMEWGAEKSGEWLTSILL
SIFQSVLVIQPIKVIIFAVIIALTFKKFGKEEDTLTSGGLADDEEFLPPA
ADAKDVKAPKMPNSSASSREADLAAARSRRLKELRMNTILWDVTKHFLVV
AVVFYLAFSSVPMNGYFMHKALENTFSPIKMVKSVDGVWRWANTELLKVL
FAQPASSILDDQSYRVGAAAFKQFRSRPGACISSTMALPVCKLDYSLTQY
ENGDFGVGWRPLLDTNVTNIPLGRRNSRREVLRFLANVTSRRRPYGKLGD
VVDFTSRWNDYYEKWKNDTSFAASMASAWVFTPGASFRYSGQVDTYTDGA
YMFEIGNDPRHAVITMKHLQENSWLDDFTEAVIVEINAYNANADLFAVID
LQVEFQAGRTAVTTKDIHIFKLYSYLGTAGQLTIAFQIVFAILFALSLFR
EGKKLVKQKRKYFS Run BLAST on NCBI mRNA from alignment at Sc0000086:1168265..1171192+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96192_cuf4 ID=transcript:BL96192_cuf4|Name=transcript:BL96192_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=2928bp|location=Sequence derived from alignment at Sc0000086:1168265..1171192+ (Branchiostoma lanceolatum)
CAGAAACAGTCGGGCCTGCCCCACTGGTGCGTGTACATCGGCTGGGTTCT
GGTCTTCCTGTCGGCTACAGGCTCGGCCTTCTTCGTCATCCTCTACAGTA
TGGAGTGGGGAGCGGAGAAGTCGGGGGAGTGGTTGACTTCAATTCTACTC
TCCATCTTCCAGTCTGTCCTGGTTATCCAGCCGATCAAGGTAGTTTCTAA
TTGAAGAACATAATTGTACACCTCTGTACAACTTTGTTGTATTTCTGTTG
TAAAGCTTGTCAAAGGTGGTGTGTTACGCCGAAGGGTGGATATACCAGCT
ATATAGATACAGATACAGAAAGGCAAGGCCGGATTTGAAGATGATTTGAC
TTACCTTTTGATTAATCTAATCAGTTATTCCATATATGTTATTATCTATA
TCTTACAATTTCTTTTAGACATTCAGAGTCGCCTGCTGATGTGACTTGTT
ATCCGCCACGTTTACAGGTGATCATATTTGCTGTCATCATTGCGCTCACA
TTCAAGAAGTTCGGCAAGGAGGAAGATACACTGACCAGTGGCGGTCTAGC
TGATGATGAGGAGTTTCTGCCTCCAGCTGCAGATGCAAGTAAGTTTGTTT
TTTCCAAAAGATGCACATTCGTCAAGCTGCATTCATTTCAGAGATAATTT
AGTTTACTTTCAGCAAAGATTTTAATCTGAAGGTAGCTAACGCGTTGCAT
TGTTACATAACCTACTGGGACTGTACGCCTGAATCCTTGGTTGACAACTC
TCACTTATAGTCATGACTGTTTCTTAATGGGCAGAGTAGAGTAGTTAAGA
GTTAAGAGTAATAATTACTACTACTATAGTTGGTAAAATGTGTCAATGGA
AGTTGGCTACTGTTTCATGATGACTGTGTAACAGTGCATGCCATATTATT
TTGTAACGGTACAAGTAAAATACCTATTGTAACAGTGCATGTGAAATGAC
GTTGTAACGTTAACAGTACAAGTGAAACGACTCACTGAAATATCATAAAA
GATGAGAACAGTTTCTAAACATAAGAAAAGTACCAATGTACTGTGGCCAC
AATCAAATAAACGTTTGCTCCTTGTTTGGTACAGAGGACGTGAAAGCCCC
CAAGATGCCGAACTCCTCCGCCTCCAGTCGAGAGGCTGACCTGGCGGCAG
CTCGCAGCCGGCGGCTGAAGGAACTCCGGATGAACACCATACTGTGGGAC
GTCACCAAACACTTCCTGGTCGTCGCCGTGGTCTTCTATCTCGCCTTCAG
CAGTGTCCCCATGAACGGGTACTTCATGCATAAGGCTCTCGAAAACACGT
TTTCTCCTATCAAGATGGTAAGAACAATCACGGTTTTCTAAGAGGACCAT
ACAGTCGCTACTGTTTGTATATCTTTGATATGGCAAAAGACTGAATACGT
TACATATGTAGTATGATATGAAATCATCGGCGCTTTTCTGGTTATTTTTA
CAGATATCAAATTTGTTTTGATTTTTTTCATGACGCAACAAAACAAAATC
AGCATGCAATGTCTCATTAGCAGCACACAATAGACTCCAATGGAAAAATT
GAAGTATTAAAATGGCGTTCATTCAATCATACCTGTACCTGATATTTGAT
TGACAGGTGAAATCTGTCGATGGCGTCTGGCGCTGGGCCAACACCGAACT
GCTCAAGGTTCTGTTCGCCCAACCAGCGAGCAGCATTCTGGACGACCAAT
CCTACAGAGTCGGGGCGGCTGCCTTCAAACAGTTCAGAAGTCGTCCGGGT
ACGTTAAAGACCAGGATTATATAGCCAGACAGCGTGCACCAATCAAAACT
AAGATATAATGTCACAAGCATTCTTAAATTAGTGAAAAAAACCTCCTCAA
AGTGGCTAGGCAAAATAGTGATAAAATCTCCCAGAACTGGCTACGTTTAC
TACTGCTTAATTCTTACGTGTATCAGGAAAACCGTTCGATTTATCATTTT
TTTTCAATATCACAGGTGCCTGTATTTCAAGCACCATGGCCCTTCCTGTA
TGTAAGCTGGACTATTCCTTGACGCAGTACGAAAACGGAGATTTTGGGGT
TGGATGGCGACCGCTTTTGGACACAAACGTCACTAACATTCCGCTGGGGC
GAAGGAATTCCCGCAGAGAAGTTCTAAGATTCCTGGCCAACGTCACATCA
CGACGACGTCCGTACGGAAAACTTGGGGACGTGGTAGACTTCACTAGCAG
ATGGAACGATTACTACGAAAAATGGAAAAATGACACAAGTTTCGCTGCCT
CCATGGCATCTGCTTGGGTCTTCACACCGGGAGCATCTTTCCGCTACAGC
GGGCAGGTCGACACGTACACCGACGGGGCTTACATGTTCGAGATCGGCAA
CGATCCTCGTCATGCCGTCATCACCATGAAGCATCTGCAAGAGAACAGCT
GGTTAGACGACTTCACAGAAGCCGTTATAGTAGAGATTAACGCTTACAAT
GCTAACGCCGATTTGTTTGCGGTGATCGACTTGCAAGTCGAGTTTCAAGC
CGGGCGCACGGCTGTAACCACCAAGGACATTCACATCTTCAAATTGTACT
CCTATCTGGGAACCGCTGGACAACTGACGATTGCGTTTCAGGTACGTATA
CATTACTAGCTCTCTATTGGGCATTATAATCTGTTGGTCCAATATGAGCG
ATCACATAGGGAAGGACCAGTGGAGAGAGGCCTGATAGATAACGTTCGTC
CCGACCAAAAACAGCACAACAGTTTAAGTTTACTTTCGGTTTTCAAAATA
AGAATCATCTCATGTTTTTCACTTATGATTGCAAGTGTTCTGTGATACTC
AATGATGTGGCGTTGTCATGCAGCACTCGTCTGTTTGTTTTACAGATTGT
CTTCGCCATCTTGTTTGCCTTATCGCTGTTCAGAGAGGGAAAGAAGCTGG
TGAAACAAAAGAGGAAGTATTTCTCCCA Coding sequence (CDS) from alignment at Sc0000086:1168265..1171192+ >transcript:BL96192_cuf4 ID=transcript:BL96192_cuf4|Name=transcript:BL96192_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=1392bp|location=Sequence derived from alignment at Sc0000086:1168265..1171192+ (Branchiostoma lanceolatum)
CAGAAACAGTCGGGCCTGCCCCACTGGTGCGTGTACATCGGCTGGGTTCT
GGTCTTCCTGTCGGCTACAGGCTCGGCCTTCTTCGTCATCCTCTACAGTA
TGGAGTGGGGAGCGGAGAAGTCGGGGGAGTGGTTGACTTCAATTCTACTC
TCCATCTTCCAGTCTGTCCTGGTTATCCAGCCGATCAAGGTGATCATATT
TGCTGTCATCATTGCGCTCACATTCAAGAAGTTCGGCAAGGAGGAAGATA
CACTGACCAGTGGCGGTCTAGCTGATGATGAGGAGTTTCTGCCTCCAGCT
GCAGATGCAAAGGACGTGAAAGCCCCCAAGATGCCGAACTCCTCCGCCTC
CAGTCGAGAGGCTGACCTGGCGGCAGCTCGCAGCCGGCGGCTGAAGGAAC
TCCGGATGAACACCATACTGTGGGACGTCACCAAACACTTCCTGGTCGTC
GCCGTGGTCTTCTATCTCGCCTTCAGCAGTGTCCCCATGAACGGGTACTT
CATGCATAAGGCTCTCGAAAACACGTTTTCTCCTATCAAGATGGTGAAAT
CTGTCGATGGCGTCTGGCGCTGGGCCAACACCGAACTGCTCAAGGTTCTG
TTCGCCCAACCAGCGAGCAGCATTCTGGACGACCAATCCTACAGAGTCGG
GGCGGCTGCCTTCAAACAGTTCAGAAGTCGTCCGGGTGCCTGTATTTCAA
GCACCATGGCCCTTCCTGTATGTAAGCTGGACTATTCCTTGACGCAGTAC
GAAAACGGAGATTTTGGGGTTGGATGGCGACCGCTTTTGGACACAAACGT
CACTAACATTCCGCTGGGGCGAAGGAATTCCCGCAGAGAAGTTCTAAGAT
TCCTGGCCAACGTCACATCACGACGACGTCCGTACGGAAAACTTGGGGAC
GTGGTAGACTTCACTAGCAGATGGAACGATTACTACGAAAAATGGAAAAA
TGACACAAGTTTCGCTGCCTCCATGGCATCTGCTTGGGTCTTCACACCGG
GAGCATCTTTCCGCTACAGCGGGCAGGTCGACACGTACACCGACGGGGCT
TACATGTTCGAGATCGGCAACGATCCTCGTCATGCCGTCATCACCATGAA
GCATCTGCAAGAGAACAGCTGGTTAGACGACTTCACAGAAGCCGTTATAG
TAGAGATTAACGCTTACAATGCTAACGCCGATTTGTTTGCGGTGATCGAC
TTGCAAGTCGAGTTTCAAGCCGGGCGCACGGCTGTAACCACCAAGGACAT
TCACATCTTCAAATTGTACTCCTATCTGGGAACCGCTGGACAACTGACGA
TTGCGTTTCAGATTGTCTTCGCCATCTTGTTTGCCTTATCGCTGTTCAGA
GAGGGAAAGAAGCTGGTGAAACAAAAGAGGAAGTATTTCTCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000086 | genome | Sc0000086:1168265..1171192 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96192_cuf4 |
| Biotype | protein_coding |
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