transcript:BL96266_cuf5 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96266_cuf5
Unique Nametranscript:BL96266_cuf5
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96266_cuf5

>transcript:BL96266_cuf5-protein ID=transcript:BL96266_cuf5-protein|Name=transcript:BL96266_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=1101bp
MVVQYNKGQAADGVQTDPFMMLISPVEQFNSRYVLATVDSPTNTYTSYIG
VVIKTSERDGIRMDGAALSATWVEIPGSSYSAAAVQISQGTHNIRHTSPI
SVFSVYLYGHTPYESFATIGGSRFNDLAGPCTATETASGDGVDNDCDTRV
DEELRNGVDDDGDGLIDEDLASEEGDVDECAENLDDCDANADCINTHGSY
NCECRAGYTGDGRTCEGAEGVCKCNGDTHCYTFDDRKHDYQGICEYILFA
TDGSGNLPALSVYISLEHRYGRTHVSYVWKVSLLIYGIRIDVILSNKVIL
WNGHRINLGCTLPHGLSVRKLGRGVVIRTSFGLTVTVSGKSGVRLNVPGP
YRGTTRGICGNWNSDANDDNLKPDGTAAANTPEYGDSWISPLSCGTTTTP
VDPTNGCDLPAMEALCELIRDALGPFAAGHGTLSPTAIFDDCVYDTCATD
GSPDEVCEAAAFFALEVQLAGITIATWRTVEFCPSNCPVNSHYQECGTAC
PATCTDTGAPDACAQPCLEGCFCDEGYVLSGDTCVSIFDCGCVHNGFYYQ
VGSSWVTANCAEQCTCNAKNSLTCEAVSCHADAFCGVQEEIFGCHCNDGF
VGDGIECRPPGRCPAGWTEFGLSCYKVVETAVTCDEAGPSAAGMDARLAI
IRDEATHTFVSGLLSAVSTTATYYIGLSDRVLELAFYWSDGSYLRNYDAW
GSGYPGAWDRDNNCVFYYFANGAWWWRVGGGSMYCVVERYFSCPEGWHLW
GGSCYYAFSFSYSWDATWTFLSSAEGQYSSLVMINSQEENDYVYNMVGNG
YRIGAYRRNGYWYWRWWYRWYRYYWWYYIYWFNWQPGDPNNGGDCAVFSP
QGFWEDDDCTGGRPFCAEMDINECNSNPCGPNSRCINHPNGYTCECIPGC
MGEGCKASGNCWVVTGSHYFQFDGSRVDFLGSCSYILARYRGDSGRLTQF
TVTSGNEYRDGFTDVPYLRWVSLAVGDNTVTLRRNGVVEWNGVPRFLPFY
VGRQMAVRRSGYFVSITTNFGLLVEYDGDRAVHVELSSDYGNAVKGMCGD
FSGDNNGDLEKPDGTDAGNAAVFGDSWRSPGCPGGTPNVYPWDGCDTSPF
A
Run BLAST on NCBI

mRNA from alignment at Sc0000098:742209..756437+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96266_cuf5 ID=transcript:BL96266_cuf5|Name=transcript:BL96266_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=14229bp|location=Sequence derived from alignment at Sc0000098:742209..756437+ (Branchiostoma lanceolatum)
TTTTTCTGTAATTTTTTCAGTGGGGCCCTGGAAGGCATATTAACAAATTA TACATACAAATTGTTGAAGATACTTTCCTACGTTTTCACTCTAAGTGTAT CTAAAAGCTATACCTACTATACCTAGATAATCACGAGTATATACTGTACC TTTTACACTTACTGTCTTTGTCCGTTTGCAGGTCGACATTGTTGGACAAA ACTCACGAACGGTGAACGAGGGACGGTTTTTTGACATCGACCTATCTTCT AATGAGTATCTGGCCATCTCTGCTTCTGAACCAATCATGGTAGTGCAGTA CAATAAAGGTGCGTTGGATTCATTAAAGATGAATAAAAATTAACGATCGT TATCTCCGTCACTTCTAAAGTTATCATAAGGTTATCACTGAATGATAACG TTAGTTCCGATACTTTCTTTTACCAATGTCTACAGGTTTGAAATGTTGTC GCACTTTCAGGCATGCACAATATTTATGTTGAGCCCAACATACTGTTGTT GGATGTTAGGGCGCATGCGATGTCAGGGCGCCCCCCGTTATATATTTGTA GAAGACTTTACGAAAGTTGCTGTACTTTTGTTGTGTCAATAGAGATGCAT GTACTGTACATGTGTACCTGTCCACGAATTCGAACGAGACTAGAAAGACA GCATTTGCACGAGGAAATACAACATGTATCGCCAATTTCCCTCCCCATAC AAAAAGCGACTGTTCTAATGCAAAAATGGAGCATTCCAAAGTATAGTATA GTAAAGTAAGACCATGTAATGACCATTGCAAATATCAACGCCATCCAGGC TTAAGTTTGTTGTATGTGTGCAATGTTGGTATTTGAATAAAGAATTGAAT TGAAAACCAGTCAGAAATGAATCTCTCCCAATTTGAAGGCATACATATAG TATGGGCGATACGTAATTATGAGCTAGACTGATTTCTACTGCACAATATA GTTGCTGTCCGGTATCTCACTCCCTGAAAGACATAATTTGTGAATGATAT AACTAACTGAAGGGTCTTTTGTTTTCCAGGCCAAGCTGCGGACGGAGTAC AAACTGACCCGTTTATGATGCTGATTTCTCCTGTGGAACAGTTCAATTCA CGATACGTCCTGGCCACAGTGGACTCCCCGACCAACACTTACACCTCTTA TATAGGTAACATTGCAGTCCATCTATCAATGCCATATTTCCCTCCTTTTT GATTAATTAGATTCCTCAGAGTCAATGTCCCCATGTGTATCTACGGGTAC TGATTATATCAACAGTCAATATAAATCTATTTTCCTGTGATAAAGACAAT CACGTCTGCTCAATTGATCGATCGTGCGACATGTGACGTGTTTCTTTCTT TTAAAGGTGTGGTGATTAAGACCAGTGAACGTGATGGCATAAGGATGGAT GGCGCTGCACTGAGCGCAACTTGGGTAGAGATTCCAGGCTCCTCCTACTC TGCAGCAGCAGTTCAAATAAGCCAAGGAACCCACAACATCCGACACACCA GCCCGATCAGCGTCTTCTCTGTGTACCTATACGGCCACACGCCTTACGAA TCTTTTGCAACTATTGGAGGGAGTCGATTTAACGATCTCGCGGTATGTTA CAGAGTTGGTTCTTTTTGCTCGCTTTTTGTCAGTTAAACCTCTCAGTATC GAGACGCCAAAAACAAGTTGGAAGACTGCGTCCTTCCCATACCCACAACG CCATTTTATGTTCCTTTTGATCGCAAAATGAGGGCATTCTTAACATACAG TGACGTGTCGTGCACTAAAAAATAATATCTTAGCTCCTTACCGGCGGTTG TTTCTGTCAGAGCCAATTTTGAATGACATCAAAATCGTACGACGTCCTAC GAAGAATGTGACCTGGCTTTCGCACACTCCCTTATTATATCAACAATATC CCATCCTCACCTCACCTATCCCTTGACCTCTTTTTGGATCGTCGGGGCAC CATGACTACACTGTAGTTTCCCATCCACCACGGCTTGATAATAATTCCTC ACATTAGTGTGTTTTAAAATTAAACGGCGTAAAATATTACCATATCTGCG TACAGGGACCTTGTACAGCTACGGAAACTGCCTCCGGAGACGGAGTTGAC AATGACTGTGACACGAGGGTCGACGAGGAGTTACGGAATGGGGTAGACGA TGACGGCGACGGGCTGATCGACGAAGACTTGGCCTCAGAAGAGGGAGATG TCGACGAATGTGCAGAAAACCTCGACGACTGTGACGCAAACGCAGACTGT ATCAACACGCATGGGTCCTACAACTGCGAGTGTAGAGCAGGATACACTGG TGACGGCCGCACATGCGAAGGAGGTATGATTCGTTGTTTCTTTCTTTCTT TTTTTCCCTTTCTCTCTTTCTCTCTCTCGCTTCCCCCTCTCTCTCCCGAC TCTCTCTTTCTTTCATGTGATGGCTACCTGAAATACACGGTACGGGCACC CCAAACATTCTTTCTTTATCTCGTTGTATTACATTCATTACACTACCCGT ACAAACGAAATATACGATAACATAACGATGTTTTCCGTTGTCTATTTGAA CAGCTGAGGGTGTATGTAAGTGCAACGGTGACACCCATTGTTACACCTTC GATGACCGAAAGCACGATTACCAAGGTATCTGCGAGTACATCCTGTTCGC GACGGATGGATCCGGGAACTTACCAGCCCTTTCGGTCTACATCTCATTGG AACACAGGTCAGAAATAAGTTACATTGAAATTCATACTTGATGAAACTCC GAAGGTAAACAATATCATATGTTCTAAAACAAAATGTGCTTGAAATGAAA AAATAGGCTCAGATACAAAATGCATAATGTATATAATNCAAAATGCATAA TGTATGTAATCATCAATGTGTACCTACTTACATCAATGTGTACTTGAGAA CCGGCAGTATTGTTGATTATGTTTTTCTTCTTTAGATATGGTAGAACCCA TGTGTCGTATGTATGGAAGGTGTCCCTTCTCATCTATGGAATAAGGATAG ATGTCATACTGTCCAACAAGGTCATTCTGGTAAGTGTATGTTGTTGTGAT CAACATGAATTATTGTGCCCTTAAGTTGTGAACAGTAAAACGTATTCTGA CATTCTCTCTCTTTTGTTTTCAAGGAAATACCGATTGATCTGATTTGATA GATGGATGAGTAAGAATAGCAAATAAAAACGTCAATTGTATTTCGTGTAC ATTATCCAATATGCCATGTATAGGACAGTCAGTAATACATTACAATTACA TTGAGTAATTGAATACCCACATTCGAACTATTGATGTAGTTATATATCGA ATCTTCTTAAAAGAAACTACAATTTCTTTTACAATAAAGACTTAGTGCTT TTGAGACGTGTTAAGCATAACATTAACAAACGACACATACTTAGGAAAAT GGAAGTGGTATTTTAGTCTTACAAAACCAAATGACGTTTCGTCCGTTTGG AAATGCGTCTGTAAAATTGCTATATACATTTTGTGATATCTGCAATTGTC TCTCAGGAGTGTCCTGGATTTTAAAAAAATACGGTAACATTCTCTTTTCA CAGTGGAATGGGCATAGAATTAATCTTGGCTGCACTCTTCCGCATGGACT GAGCGTGAGGAAGTTGGGGCGAGGCGTTGTGATAAGGACCTCTTTTGGAC TGACTGTGACAGTCTCTGGAAAAAGCGGTGTAAGAGTAAGTGTCACAGGT CTCTCCTGTATACATTATATAGGATTTTGGTACCCCTCTTCTTTAACATA CGCAAACAGTATAGCATCAATATGAAAGAATAGGTCATCACCTTTTAGAA CAAGACTTAGGAGACCTCATATCTCCATGAAGTAGTCTGGTTATGCAAAT GACTCCACATTAACAAAATATATGCTTGGTCATGTACACCTCTAATTAAC ATATCGCAATATTGGCAGTTCAGTCATTTACCACTTAGATTAAGGCGCTT TTGCATTGATTATGCAAATTTCTAATTCATTTACATGGTTAATGCAAATC GACCTTGAGTTTCGTCAACACCTACCCACATACCAAATATCATCATAACC CATCCAGAGGTTCTTGAGTTATGCCAACTACAATAATCCGGAAACACAAA CAGACACACACAGATACACCCAAAACTATATCTCCATTTCCATGGAGATA GATATGCTATGCACGCTAAAGCCGTTGATGCATTTGACAGCTGAACGTCC CTGGCCCCTACCGTGGGACAACCAGAGGCATCTGCGGAAACTGGAACAGC GATGCTAACGATGACAACCTGAAGCCTGATGGCACTGCGGCAGCTAATAC ACCTGAGTACGGGGATAGCTGGATCTCACCACTTAGGTAGGTGGAGTATT TTTGAGTACATAACATTCGGTTATTGGCTAAGGTACTTTCAGATTACGTT GATGTAAGGTTAGACATCCAGGTAATAAGATACGCCCAAAACAGTTACAA GATCAACTGGATAAGATGTTGAAACAGTCAGACGTTTCAGCTCGTTATCC CCCATTCCACTTGGACGGCGCTCTCGCTGCGCTCTCACGGCGACATAAAG TTGGCCAGAGCCTCGTGAGAACGCCGAACTCCTGGAAAACGTGCTCAAGT GGAATCTCTACGGTGACCCTTGCGCGCTCTCAGCGCGACAAAAATGTTCA ACTTAGGCCACAGCAAGTAATTTTTATGGATGACATCAGCGCGCTCATTA ATTTTCGCCTGATTTCGAAATAAAAAACAAGAAATTTCATTGCCCTCCGA CGGTGGTCAACATGCCAAAAATTGGCAAATATGTCGTAAACGTTGACAGT CTAAGGTGTTTCATTGCATATGAATACCCAGTGTAGTTCCTGCCCATGAT GGTATGACAAGCTGTTTTCTGCGTTTGTTCTAGTTAATTGAGCTGTATAC ACATCTTCAAGAACAGTTTAATGTTGACAGTCTAAGGTGTTTCATTGCAT ATGAATACCCAGTGTAGTTCCTGCCCATGATGGTATAATAACAAGCTGTT TTCTGCATTTGTTCTAGCAAGGACATTATATAAATAATGGGGGGGGGGGT CTAGTTAATTGAGCTGTATTCACAAGGTGTTTCATCGCATATGAATTCCC AGTGTAGTTGCTTCAGATGATGGTACAACAAGCTCTTTTCTGCATTTGTT GTAGTTAGTCTATTGAGATGTATAAACATCTACAAAGACATGTTTACATT GAATTAAGGAGGTTTTATATTATATATGGAACCTCATTGGTTAAATACAG GAATAAAAGACCTGTTGGTCATGATATCCTATTTGGTCGCCTAAATTCTT GTTAAACAAGACTTATGATCTCAAAATTTAAAAATATAGGAATCTTGTTT TTTTTGGCCCGCCTTGTTTTTTTTTCGCCCTATCTCATTAATTTTGGAGT CTGTGGAGGATGTCATCCATAAAATTTACTTGCTGTGGCCTTATGTTCAA ATATGTTTTTTTTCTGTGTTGTCTGTCATGTAACCTGTTTGCAATGAATA TCTTTTATCATGCTACGTTAAAATAGGAACGTAAATCACAGAATTTCGAC ATACTTTTTGAACTACTGACAATAAAACTTGGAGGGAATTTTATCTGAAT GAAAGCATGTACTTATTTGTCCATTTGTATTACCCATGAACAAAAGTATC AGTTGACCACAAAATTCCGAGAAATTCAAGATTTACCAGTTTAAGAATGA AATTTGTTTGAACTACATTTGAGATCATTCAATCCTCGTACAGCGCTCGT CGCGATCCTTGAGCGCTCGCTGCGGCCCTTTGATCCCACGTTGGGCGCTC TCACGGCGCTCACCGCGCTCTCACGGCACTCTCTCTGCGCTCACCGCGTT CACTGCGCGCTCTCTTGGCGCTCTCACTGCGCTCTTTACTTGATCGCCAT CCTCGGCACTCTCACGGCGACTGTTTTGGACATGTTCAAAATCATCGCCG AGGTGACGGCGCGCATGGCGCTCTCGCCGCGCTCCCTCCGCGCTCCCATG GCGCTCTCGCCGCGCTCTCGCCGCGCTCTCGGCGCTCTCACGGCGATCTG GCCAAATTGAGGTCGCCGTGAGTGCGCGGCGAGAGTGCCGTCCCAGTGGA ATGGGGGCCTTAGTGACTAAAGCCCCTGTCACACTTGTGCGTATATACAA GTCCGCATGAGTTGCGTATCAACATGTTTTTGGTTTAGGTTTAGTGCCGG AGAAGAAGTCATTTCTTTGGTTCGATAAGCAGGCTGTACAGCGGTAGGTC GAAGTAAAAAACAACTTCTTCCCCTCAAACTTTACTTAAGCCAAAGAAAT GTTGATGCGCAGCTCATACGCACTTGAATATACGCTCAAGTATGACAGGG CCCTAAGGACTGGAGAACAAGGTTTTATACCAAAGCTCTGCATAGATATG TTAATGACCTATCTACTTTCAGATAGGTTCCAAGCAAAACTTAACGCTTC GTCAAGATCCACTCTCTTGCAGCTGAAGTTGTTCCTTTTACGAAAGTGTC TTGTGTCCTCACTACTTACATTATTTCCACATGGTACATTTCCTCAAGGA ACTTTAAAAGAATATAAACAATTCAGCTCGATTGATGTCAGTTACCATTC TTTCAGCTGTGGCACGACAACAACTCCGGTCGACCCGACCAATGGTTGTG ACCTCCCGGCGATGGAAGCTCTCTGCGAGCTCATCAGAGACGCCTTAGGT CCGTTTGCTGCAGGTCATGGCACACTGTCACCAACTGCCATATTTGACGA CTGCGTTTACGATACGTGCGCAACGGATGGAAGCCCAGATGAGGTAAGGG GCCTTCAGACCGAAAATACCAAATAGAGTAAACCTGTTAGCTTAAATCAT ACATGCATCAGTCAGTAATTAGAACATGCTCCCGGACGGTGCTGACAGAG ACATATTAATGAAAGTGGCCTCCAAGCTTTGAGACTCGTACCCATCACTA CCTTCTAAAATGCAAGAACACATGACAGCTGTGAAACATTGATTAGTCAC TAAACTAAAGTGTTATATAGAACTCTAAAGCCATACCCCTGAATTCTGCT TACGGTAATATGATTGGCTATTTTTTGCCATCCCTCCACAATAAAAACGG ATCCATATTTTAAGTGTTACAGGTTTTATTTATTAACTTTAACAAACAAA CAAATAACAAACAAACAATGTAATCCCCATTTTTCAGGTTTGTGAAGCGG CTGCCTTTTTTGCTCTAGAGGTCCAACTGGCAGGAATAACCATAGCGACT TGGAGAACTGTTGAGTTCTGCCGTAAGTATTGTTTGGTTGCATCATCAAA TACGATAACAATCATAACGACTGTAGTGCGCCTTTCTTGTAGCGGATATT GTTACAACTTCTATCGCATGCTAAGCTGTAAAACATCGCCACGTCTGTAT GACTTAGGTGGCCGTTGGTTAGACGTGTGACTTAAACGTAGTTTATGACA TCTGCAAATCTTACTACGTGTTAGCTTGAAAGTCATTCGGTGTTGATAGA AATAATTCTGTGTTGACCTGTAATTTCAAACACAAAATGTCCGAATTTTC GCTAATACGCGTTAATAGAAAGTTTGTAGAAGAGACAATAAATTAGCACT CTGTTCTTACAATCTTCCTATAGTTTAACTAGGGGCACCGTCTACTAGTT TCTGAATCGACCTTTTCCCAATATACATTAAAGAACCAAGCATTGACAAG TACAAATACGTGTAGCTGACAGGAAAAAAAGCTCCTTTGCATTTTATTTC GCAGCATCCAACTGCCCCGTCAACTCGCATTACCAAGAATGCGGGACGGC CTGCCCGGCTACCTGTACCGACACCGGCGCACCTGACGCATGCGCCCAGC CGTGTTTGGAGGGGTGCTTCTGTGACGAAGGCTACGTGCTGTCTGGCGAT ACATGCGTCTCGATATTTGACTGTGGGTGCGTCCACAATGGCTTCTACTA CCAAGTAAGTATCGTTAAACGTAAAATGTGTATATAATGATATCACGGGA CTGACACTGTACTAATAAAATCAAAAGTATGTATATGTTGACACTACAGA TGATGTCGCCTTTTCTCACACTGATTGCAATGTTATGTCCATCAATGGAT AAGATAGTCGATGTGGATAGTTATTAACATATTGTGCTGCCCAACATGTG GTTTGCGTATGCGTTATGATATATGAGCATTTGTGTACGTATCGTACTGT GATGTAATTGCCGACAATTATAAAATAAAATCCCTATATTCTGGTACTAT GAATGCAATTCAAATCGGTATAATAAAACTATCTTATCCTTTAACTTCTG CAGGTGGGATCCTCCTGGGTCACGGCAAATTGTGCAGAGCAGTGTACCTG TAACGCCAAGAACAGTCTAACCTGCGAGGCGGTAAGCTGCCACGCCGACG CCTTCTGTGGCGTGCAGGAAGAAATCTTCGGCTGCCACTGCAACGACGGC TTTGTAGGCGACGGGATCGAATGCAGACGTAAGTTTGAACTATTATGCAG TAGCCATTGGGGGCATATGAAAGTAATTTGCAGTATTTCACATCTCTTAG TTTATAGTCTTTCTCAGAATCAGGGTTGTATGACATTGTTGTAGATGGAG TTGTTGGTGTGAAGTTGATGAGATGATTGTTGAAATTATCACAGAGCTTC GAAATCGCTATCTATCTCTGGTTAAAGGAATGTGGCAATGTTGCTTGTTC ATGTGGAAAGTCCGTGCATTTTTGTTCTGTCTTTACCACGCGTTTGTAAG GGGAATAGCGACAAGTCCTTAAACGTAAGTATAGAAAGAAACGAAGACTT TTCATACGTAGAGACATTGTCGTCATCTGTACTAGATATACGTGCATCAT AGCAGGTTTTGTTTGATCTGCGACTTTTGCAAGTATGTGGAACTGAACAG TCCATGTCCTTGGCTCCTTACAGCACCAGGACGTTGCCCGGCCGGATGGA CGGAGTTCGGACTGTCGTGTTACAAGGTGGTGGAGACCGCAGTCACCTGT GATGAGGCCGGGCCGTCAGCAGCGGGCATGGATGCCAGACTGGCCATCAT ACGGTAAGCTGTCAGATGTTTGTTTGTTTGTTTTAAGTGTTGCTGATAGT TTGTGTGTGTCTCAGGTTTGCTTGTTTCCGCATTTTGTGGTTAGCATAAC TTAAGAAGTTCTGGATGGATTGTGATGATATATTTGGTACTAGTATGGGA AGGTCAAATAAATAAATAAATAAATGAAACAAGATCTCCTGGGGGCTTGC CTTGGTATTGCGGCAGAACTTTGGGTTGTTGCATCTTTTGTCCTCGATAT GCTATGATCTTGACTTTTTGGTGGCAGATATCGTTTGGTATCAGGAGGAA GTGGTGTAGGTTTGGGCCCCTAGTTTCTAACTGTTCATTGATCTATCTTT ATTTCTATATGGCCATAAGCAGAGACAGGGGACAAATTTCATCATCGACG ACTAATCATAAGCTGAGTTTCTGTTCTCTAACACAGGTATGATGTTTGGT GAAGCAGATGTATATGTTGCCCAGGACCATCCCATTTTTTACCGCTAATT GGGGTAAAATGCGGGGGGTAAGGTTTAGCTGTTATAAGTTTCTGCAAACT CAAGATTATTGTTCTCGTACGTTCTAGGGACGAGGCAACGCATACTTTTG TTTCTGGTCTGCTGAGCGCCGTAAGTACAACTGCAACCTACTACATCGGT TTGAGTGACAGGGTTTTGGAGCTAGCCTTCTATTGGTCAGACGGCAGCTA CCTCAGGAACTACGACGCGTGGGGGTCAGGCTACCCGGGCGCCTGGGATC GGGACAACAACTGTGTCTTCTACTACTTCGCCAACGGTGCCTGGTGGTGG CGTGTAGGAGGAGGGTCCATGTACTGCGTTGTCGAGCGCTGTGAGTAGTG ATGTACTTAAAGTATACTTCGTATCTTTTATAGTGATGTCAAGGTTTCTT TTATAATGTGTTTGATGTTACGTACTATGCACTTTGATTCGTATTATGCC GGAGTTACCAAAAATATATACTTTTCTGACACTGTTCTGTCTTAGATAAA CTGCTACATGTATTAAGTCACATAGATCAGACATTTGAGCTTCGTCTGTT TTTGCATGACAAAGTCCAAATCAATTATCAAATCTAATGTATACCTCAAT ATTGTGCCCCTATTATAAGTTCAACATTATGAGCCTCCTTNCATTGTGAG CCTCCTTTTCTAGACTTCTCCTGCCCAGAAGGTTGGCACTTGTGGGGCGG CAGCTGCTACTATGCCTTCTCCTTCTCGTATTCGTGGGATGCAACATGGA CGTTCCTGAGCTCTGCTGAGGGCCAGTACTCCAGCCTCGTAATGATCAAC AGCCAGGAGGAGAACGACTACGTCTACAACATGGTTGGAAATGGCTACAG AATCGGAGCTTATAGACGGGTAAGTAAAGTACTTTTATCCATGTTTTGAA GGCATGGTCTATATAAATCAAATATGACTTTAATGCGAAATAATTAGCAA CTAGACAATGATAGAACGATGAGGTCATGGTACTTTTGTTTGTGTTACAG AACGGGTACTGGTACTGGAGGTGGTGGTACAGGTGGTACCGGTACTACTG GTGGTACTACATCTACTGGTTCAACTGGCAGCCTGGAGATCCCAACAATG GTGGAGACTGTGCCGTGTTTAGTCCGCAAGGTGATTGATCTTTATCATGC ATTGCATTTACCGGTTTACACTTGTATGAAAATTAATAAAATCAGTGGTT ATATTAGTAACATACATAAATTTATCTGTTCTCATATGCATTATGGATTT GATGATTGAAACTACATGCCTTTGGCTGATATTTCTAGTTTGTTGCTTAA TTATACATCAACATCCATGTTGTGCTGCATCATTTTGATTCAATCAGTTG ATTGATACGTTTGTCAAGAAGTCTGTTATGTTTCCCTGTAAGGTTTCTGG GAAGATGATGATTGTACTGGTGGGCGACCGTTCTGTGCTGAGATGGGTAA GTACACATGACATGCTTGTTGCGTATGCGTTAAGGTCAAGAACTGGTCCT TTCTTCCTTTCTAGTCCAGATAAACCACACTGCGCGATCAGATGCTTCTC TTTCTCCGTATTTTCCTTGACAGCGCTGTTTCATGTTTGTTCTGGTATAA GACTTATTATCAACAACGGCATTTTGATTATCTACAAATGTGTTTATCAT GCATTTATAACTCGCGCTTACTGAACATTATTTTCTCTTATTAAGGAGTC TGTCTTTAGCCTCCAATAAATCATCATATTTCGACAAAAACGTACATATT CTCTTAATAATCAATGCCATTATGTGTGTCTCTAAATATACTGCTTTTCG TAAGAGACAGTACGTTGGTGCTTATGCAATTTGAGCAAACATTCTCACAC GTATCTTTTTCATGATGATAGATATAAATGAGTGTAATTCCAACCCATGC GGTCCGAACTCCCGCTGTATCAACCATCCTAACGGCTACACGTGTGAGTG CATACCTGGATGTATGGGCGAAGGCTGCAAAGGTGAGTGTTTTATGTTCA TGTTACATAACCATCAGGCAATATTTCTCAGGTACGGGTTCTTGCCCGGA CTACTTTACACTAAGCACCGAAAGGCCACATAGATCACTCCGCCTGGCAT GCTTCCGGAGTAAACAATAAAGCTTGGAGTCAACTCTCAGAGCTGTTATT ATCGTACTTGAATCTGACGTGTTAATCAAGCATCCATGGTCATCAGAACA GAGCACAACAGTAAAAGTCTGTTTCTATAGCAATAGTGCAGTTATCTATC TTTCCTCAATGAAGTCGCAATTGTTACAGAGTGCTTTCATTGTAGTTACT ATTTGGCAGTTCTTTAAAGACGTTTATATTGTTGATTGTCTATATTCATA TTAACAGGACTTCGCAATCATCCAGAACAAAAATGTGATTTAGATATAAA GACTAATGGATGTGACTTATCATATGATATCAAGGAGGTTAAAATAGGAT TATTTTAACCTCCTTGATGATATTTTTTCGAGGCAGCAAAACTTACAATT CTTAACAACGTCACATCACTTTTCTTTTTTATCTCAATAATAGGGTAAAA CAACAACGTGAATCAAAGTTCTTACTAAAGATGAAAAGGAAATGAATACA AAATGCTGTGCAGAAATTGTTATAGTCATGGAATAAAGCGTGTGAATCAG CACATTAAGAGTAGATTGCTATTGTTTAACACTGTTTTCAACTCTTGCCC TTCCTAGCATCTGGAAACTGCTGGGTTGTGACCGGCTCCCACTACTTCCA GTTTGACGGAAGCAGAGTGGACTTCCTGGGCTCCTGTAGCTACATCCTGG CTCGTTACCGAGGAGACTCGGGAAGGCTCACCCAATTCACGGTGACATCA GGGAACGAGTACCGGGACGGGTTCACGGACGTGCCCTACCTGAGATGGGT TTCCCTGGCCGTCGGTGACAACACCGTCACACTCCGCAGAAATGGCGTTG TAGAGGTGAGAGAGGAGCCACCATATATGCATATGGTAGTGTTAGCAGAA AAAGAACGCAAGAGTGTTTGGTCATTGATAAACTGGCTATTGTGAACTGA AATGCTGAGTTTGGATGGACGGACGAGAGGTACGTGGGCAAAAGTAAAGC AAGCCCCCCCCCCGCGATGTTTTCACTTTAGTTTCATATCATATCATATT AATCATTTTGCTTTAAACCTGGTGAACCAGTAATCTCGTTCAGTCACTGG AGAAGGGTAGTAACCATGGATGCTTCATGAGAAACGTCTGACCGTGTCCT AAAATCTATCCAGCTGCTTTTAGTAACAGTTACTTACGATGTGTGATATG AACAGTGATAGCCTGTTTTTGCTTATTGACCATACAGTGGAATGGTGTAC CAAGGTTCCTTCCATTCTATGTTGGAAGGCAAATGGCGGTGAGAAGGTCG GGATACTTCGTCAGTATAACCACCAACTTTGGTCTGCTTGTGGAGTATGA CGGTGACCGGTAGGTGTCCATGTGTGCTCACGTCTTTACTTAGTAGTCTA GTGGTAACAGAATCGACGTACAAAGGTTCCGTTTGGAGTTCATCGCATTA TAGACATGACAGTCGACATTTCACTAGAAGGCGATCGCACTGCGACCTCA TTGTGACGTAAATTGGATGTCTGTAACCCTTGACTTCAGAATTGGAACAT CAATCAAAATGTAAAATCATTACTGAAAAGACAACAAATCATATAGAGCG CAAACAATTGGCTATATTTTTATATACTGTACACAGAAATTTTTATTGAC ACGACAAAAGTACAGCGCCTTTCGTAAGGTCTTCTAAAACTATACATGCA AACAACAAAAATGGTATACAAAATGATTAACCTAAGTACAAGGATATGAA TACTTCAACATGTCGAGTTAAACGTATCAATTACACTACTAGTTCTAAGA TCTAAACATTCTTTGATATATTTACCTATTTGCACACAGTAAGGGTTGTC TCCTTATATGAAATTCGCTTAGCCCTCTGTCGCAGCGAGGCCTAGTTGAC TGGGGGTGTCATGTGACTCTTAATCACATCGATTAGATACTTTATCACAT CGTTTGTTTGCTCCGATAGCGCTGTACACGTGGAGCTGAGTTCAGATTAT GGTAACGCTGTGAAAGGTATGTGTGGCGACTTCAGCGGAGACAATAACGG CGATCTGGAGAAGCCTGACGGGACTGATGCTGGCAATGCGGCGGTTTTCG GGGACAGCTGGCGTTCACCAGGGTGCGACTGTGTTTCATTTCCTTCAATA TCTTATTTGCTGACATTATCTAATTCTTAACTTGCTTTCTAGCTTCTAAG TTATCCTTAACGTCTAAGTTATGGACAACATAGCCTTCTATATGTCAATG AAGTTTGTAAAATGCTTCATTATATTGTCATGTGTAATAAAAATGCAGAA AGACCCCGACTTTTACGAAGTATTTTCACTGGTTTAGAAGTAAAGACATG GTTTCTGGAAGGTAACAGACACCCTTACTGCAAATCTAATTACAAACCAA GATCCCCAATGTGAGACGTCTCTCTTTTATAAAGAGTCTTTCTTTTATTG AACAAATTTGAAATATCAAGGTAGTGCTGTTTGTTCAGTTTCCTGTTGTT TCCTTCCTGTTGCCCAGATGCCCAGGTGGAACCCCAAATGTGTACCCATG GGATGGATGTGACACCAGTCCATTTGCCA

Coding sequence (CDS) from alignment at Sc0000098:742209..756437+

>transcript:BL96266_cuf5 ID=transcript:BL96266_cuf5|Name=transcript:BL96266_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=3303bp|location=Sequence derived from alignment at Sc0000098:742209..756437+ (Branchiostoma lanceolatum)
ATGGTAGTGCAGTACAATAAAGGCCAAGCTGCGGACGGAGTACAAACTGA
CCCGTTTATGATGCTGATTTCTCCTGTGGAACAGTTCAATTCACGATACG
TCCTGGCCACAGTGGACTCCCCGACCAACACTTACACCTCTTATATAGGT
GTGGTGATTAAGACCAGTGAACGTGATGGCATAAGGATGGATGGCGCTGC
ACTGAGCGCAACTTGGGTAGAGATTCCAGGCTCCTCCTACTCTGCAGCAG
CAGTTCAAATAAGCCAAGGAACCCACAACATCCGACACACCAGCCCGATC
AGCGTCTTCTCTGTGTACCTATACGGCCACACGCCTTACGAATCTTTTGC
AACTATTGGAGGGAGTCGATTTAACGATCTCGCGGGACCTTGTACAGCTA
CGGAAACTGCCTCCGGAGACGGAGTTGACAATGACTGTGACACGAGGGTC
GACGAGGAGTTACGGAATGGGGTAGACGATGACGGCGACGGGCTGATCGA
CGAAGACTTGGCCTCAGAAGAGGGAGATGTCGACGAATGTGCAGAAAACC
TCGACGACTGTGACGCAAACGCAGACTGTATCAACACGCATGGGTCCTAC
AACTGCGAGTGTAGAGCAGGATACACTGGTGACGGCCGCACATGCGAAGG
AGCTGAGGGTGTATGTAAGTGCAACGGTGACACCCATTGTTACACCTTCG
ATGACCGAAAGCACGATTACCAAGGTATCTGCGAGTACATCCTGTTCGCG
ACGGATGGATCCGGGAACTTACCAGCCCTTTCGGTCTACATCTCATTGGA
ACACAGATATGGTAGAACCCATGTGTCGTATGTATGGAAGGTGTCCCTTC
TCATCTATGGAATAAGGATAGATGTCATACTGTCCAACAAGGTCATTCTG
TGGAATGGGCATAGAATTAATCTTGGCTGCACTCTTCCGCATGGACTGAG
CGTGAGGAAGTTGGGGCGAGGCGTTGTGATAAGGACCTCTTTTGGACTGA
CTGTGACAGTCTCTGGAAAAAGCGGTGTAAGACTGAACGTCCCTGGCCCC
TACCGTGGGACAACCAGAGGCATCTGCGGAAACTGGAACAGCGATGCTAA
CGATGACAACCTGAAGCCTGATGGCACTGCGGCAGCTAATACACCTGAGT
ACGGGGATAGCTGGATCTCACCACTTAGCTGTGGCACGACAACAACTCCG
GTCGACCCGACCAATGGTTGTGACCTCCCGGCGATGGAAGCTCTCTGCGA
GCTCATCAGAGACGCCTTAGGTCCGTTTGCTGCAGGTCATGGCACACTGT
CACCAACTGCCATATTTGACGACTGCGTTTACGATACGTGCGCAACGGAT
GGAAGCCCAGATGAGGTTTGTGAAGCGGCTGCCTTTTTTGCTCTAGAGGT
CCAACTGGCAGGAATAACCATAGCGACTTGGAGAACTGTTGAGTTCTGCC
CATCCAACTGCCCCGTCAACTCGCATTACCAAGAATGCGGGACGGCCTGC
CCGGCTACCTGTACCGACACCGGCGCACCTGACGCATGCGCCCAGCCGTG
TTTGGAGGGGTGCTTCTGTGACGAAGGCTACGTGCTGTCTGGCGATACAT
GCGTCTCGATATTTGACTGTGGGTGCGTCCACAATGGCTTCTACTACCAA
GTGGGATCCTCCTGGGTCACGGCAAATTGTGCAGAGCAGTGTACCTGTAA
CGCCAAGAACAGTCTAACCTGCGAGGCGGTAAGCTGCCACGCCGACGCCT
TCTGTGGCGTGCAGGAAGAAATCTTCGGCTGCCACTGCAACGACGGCTTT
GTAGGCGACGGGATCGAATGCAGACCACCAGGACGTTGCCCGGCCGGATG
GACGGAGTTCGGACTGTCGTGTTACAAGGTGGTGGAGACCGCAGTCACCT
GTGATGAGGCCGGGCCGTCAGCAGCGGGCATGGATGCCAGACTGGCCATC
ATACGGGACGAGGCAACGCATACTTTTGTTTCTGGTCTGCTGAGCGCCGT
AAGTACAACTGCAACCTACTACATCGGTTTGAGTGACAGGGTTTTGGAGC
TAGCCTTCTATTGGTCAGACGGCAGCTACCTCAGGAACTACGACGCGTGG
GGGTCAGGCTACCCGGGCGCCTGGGATCGGGACAACAACTGTGTCTTCTA
CTACTTCGCCAACGGTGCCTGGTGGTGGCGTGTAGGAGGAGGGTCCATGT
ACTGCGTTGTCGAGCGCTACTTCTCCTGCCCAGAAGGTTGGCACTTGTGG
GGCGGCAGCTGCTACTATGCCTTCTCCTTCTCGTATTCGTGGGATGCAAC
ATGGACGTTCCTGAGCTCTGCTGAGGGCCAGTACTCCAGCCTCGTAATGA
TCAACAGCCAGGAGGAGAACGACTACGTCTACAACATGGTTGGAAATGGC
TACAGAATCGGAGCTTATAGACGGAACGGGTACTGGTACTGGAGGTGGTG
GTACAGGTGGTACCGGTACTACTGGTGGTACTACATCTACTGGTTCAACT
GGCAGCCTGGAGATCCCAACAATGGTGGAGACTGTGCCGTGTTTAGTCCG
CAAGGTTTCTGGGAAGATGATGATTGTACTGGTGGGCGACCGTTCTGTGC
TGAGATGGATATAAATGAGTGTAATTCCAACCCATGCGGTCCGAACTCCC
GCTGTATCAACCATCCTAACGGCTACACGTGTGAGTGCATACCTGGATGT
ATGGGCGAAGGCTGCAAAGCATCTGGAAACTGCTGGGTTGTGACCGGCTC
CCACTACTTCCAGTTTGACGGAAGCAGAGTGGACTTCCTGGGCTCCTGTA
GCTACATCCTGGCTCGTTACCGAGGAGACTCGGGAAGGCTCACCCAATTC
ACGGTGACATCAGGGAACGAGTACCGGGACGGGTTCACGGACGTGCCCTA
CCTGAGATGGGTTTCCCTGGCCGTCGGTGACAACACCGTCACACTCCGCA
GAAATGGCGTTGTAGAGTGGAATGGTGTACCAAGGTTCCTTCCATTCTAT
GTTGGAAGGCAAATGGCGGTGAGAAGGTCGGGATACTTCGTCAGTATAAC
CACCAACTTTGGTCTGCTTGTGGAGTATGACGGTGACCGCGCTGTACACG
TGGAGCTGAGTTCAGATTATGGTAACGCTGTGAAAGGTATGTGTGGCGAC
TTCAGCGGAGACAATAACGGCGATCTGGAGAAGCCTGACGGGACTGATGC
TGGCAATGCGGCGGTTTTCGGGGACAGCTGGCGTTCACCAGGATGCCCAG
GTGGAACCCCAAATGTGTACCCATGGGATGGATGTGACACCAGTCCATTT
GCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96266gene:BL96266Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96266_cuf5transcript:BL96266_cuf5-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96266_cuf5-E1BL96266_cuf5-E1-1564476830-298093Branchiostoma lanceolatumexon
BL96266_cuf5-E2BL96266_cuf5-E2-1564476830-298095Branchiostoma lanceolatumexon
BL96266_cuf5-E3BL96266_cuf5-E3-1564476830-298097Branchiostoma lanceolatumexon
BL96266_cuf5-E4BL96266_cuf5-E4-1564476830-298099Branchiostoma lanceolatumexon
BL96266_cuf5-E5BL96266_cuf5-E5-1564476830-298101Branchiostoma lanceolatumexon
BL96266_cuf5-E6BL96266_cuf5-E6-1564476830-298103Branchiostoma lanceolatumexon
BL96266_cuf5-E7BL96266_cuf5-E7-1564476830-298105Branchiostoma lanceolatumexon
BL96266_cuf5-E8BL96266_cuf5-E8-1564476830-298107Branchiostoma lanceolatumexon
BL96266_cuf5-E9BL96266_cuf5-E9-1564476830-298109Branchiostoma lanceolatumexon
BL96266_cuf5-E10BL96266_cuf5-E10-1564476830-298111Branchiostoma lanceolatumexon
BL96266_cuf5-E11BL96266_cuf5-E11-1564476830-298113Branchiostoma lanceolatumexon
BL96266_cuf5-E12BL96266_cuf5-E12-1564476830-298115Branchiostoma lanceolatumexon
BL96266_cuf5-E13BL96266_cuf5-E13-1564476830-298117Branchiostoma lanceolatumexon
BL96266_cuf5-E14BL96266_cuf5-E14-1564476830-298119Branchiostoma lanceolatumexon
BL96266_cuf5-E15BL96266_cuf5-E15-1564476830-298121Branchiostoma lanceolatumexon
BL96266_cuf5-E16BL96266_cuf5-E16-1564476830-298123Branchiostoma lanceolatumexon
BL96266_cuf5-E17BL96266_cuf5-E17-1564476830-298125Branchiostoma lanceolatumexon
BL96266_cuf5-E18BL96266_cuf5-E18-1564476830-298127Branchiostoma lanceolatumexon
BL96266_cuf5-E19BL96266_cuf5-E19-1564476830-298129Branchiostoma lanceolatumexon
BL96266_cuf5-E20BL96266_cuf5-E20-1564476830-298131Branchiostoma lanceolatumexon
BL96266_cuf5-E21BL96266_cuf5-E21-1564476830-298133Branchiostoma lanceolatumexon
BL96266_cuf5-E22BL96266_cuf5-E22-1564476830-298136Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000098genomeSc0000098:742209..756437 +
Properties
Property NameValue
Transcript idBL96266_cuf5
Biotypeprotein_coding