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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96269_cuf6 >transcript:BL96269_cuf6-protein ID=transcript:BL96269_cuf6-protein|Name=transcript:BL96269_cuf6|organism=Branchiostoma lanceolatum|type=polypeptide|length=144bp
MTTVGMMIGELELNESFISSAVEYKPGWSKPVAFLFLLLFVLLMNIVVMN
LLVALAVDDTHTIDQEASLEQRIQQVEYILEVESEFGRIVGDRHFRVPDW
TAKHKRSWIDQVFNVKKTRIKADRRGGGMTKAGLDMDAKRLSRV Run BLAST on NCBI mRNA from alignment at Sc0000228:314549..318260+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96269_cuf6 ID=transcript:BL96269_cuf6|Name=transcript:BL96269_cuf6|organism=Branchiostoma lanceolatum|type=mRNA|length=3712bp|location=Sequence derived from alignment at Sc0000228:314549..318260+ (Branchiostoma lanceolatum)
GAACGTAGACATAATGACCTGTACGCTGTACGTCAGCGCCTTCGTGTACG
CGCTGAGCTTCCCAGTCCCCGCCATCTTGGGCAGTGACGAGTCGTCCCGG
GTGGTGGTGGGGGCCATCGCTGTGCTGTTCGGATGGCTCAACCTTGTTCT
GTTTCTCAGAAGGTATAAGCTGGATAACGGTTTGAACTGTGCATGCGCAG
GGTGGTGTATTGGGGGCAATATATGTCAAAGTGGATGGCCGCTGAGACAT
AAACAACACACGTCTGGACGTCGTATCAAGCAAGGTAAAGACAACAGCTG
TCTACAAGATAGGGGCCTTCACCTTAGGCCTCGTGCGCATGTGCAGCTCA
AGCCGTGAATCGGCTTATTTTCATCAATATGCCAAGAAAACGAAATTAGA
CTCTTATCATCTTGTACTTATGATGTTTAAAGATGGTGTTTTCATCCTAG
TGCACTTTTGAAGTCCACTATAATTGTTCTGCTACATGTAGTTGTGAATC
TTGGATTATTTTGCGCTCGGCTAAGCTGGTAAAGAAGCACTCACCTAAAT
TCAATATGTAATGGAAACAATGCTATTATCAACGCAACATGGTATGTATT
TTGTAATTTTCATTGCTGGTCAGATGAGCTTGCTTATTATTGAAATCTGT
TGATCCGGAAGCACTTGACTTGACATTTGACGTTTGACCCGGATGTGTTT
TGTGGTGTTTCTGACAGGGTCGCCATCATTGGTCTGTACGTGTACATGAT
GAGTGCCATCTTTAAGACCTTGGTGAAGGTGCTGGCTGTGTTTGTACTGT
ACCTGATGGCCTTCACCTTCGCATTCTTACACCTCATGCGCGATTCAGGG
GTAAAACAACTTTTTTTCAAAATTTCCCCCTTTATTCAGTTTAACCAAAC
CTGTGCATTATTAAGACTAAGGATTCATAGCATGAGTACAAAACACGACA
TACAAATATACACTTGTTAAGATTTGTATACAAAATGTTATAAAGGCTAG
AGTGTCAAAGCATATGTAAAGTCCTATTGCGTATTTTCATGCAAGGTTTA
AACTTGGTCTCTAGCTTCGTCTCGTTAAGCGTAATCTTATCTTATATTTC
CCAAAAATCTTTAAGCCTCTTACATAGCGTGTAAAACAGCTCTTTACATG
TATAAAATAATTCTCATCACAATAAATGAAACATATATTTCTCTTCTAAG
TTTGTGTTACAACGTAAATATGATTTAGCCTCCTTCGCAGACTTCTAGGG
GGGCTGATTCGTGATTTTCAGCATAGGCCAGCTTCTTTCTGATTGCTTGT
GTCTATTTCTTGTAATCGTACGTACTGTAATTTGATTACCTTCTAGGTTG
AGGGGTTCGACAACGCTTGGGTGACGTTCATGACCACTGTTGGCATGATG
ATCGGAGAACTCGAGCTGAACGAATCCTTCATCTCAAGTGCCGTCGAATA
CAAGCCCGGCTGGAGCAAACCCGTGGCCTTCCTCTTCCTCCTGCTCTTCG
TGTTGTTGATGAACATCGTCGTTATGAATCTCTTGGTACGGTCTCTTGTC
GACCAAACTTCTTTTTTCTATTAGGCCATGTTGATTTGATTACAAGAATG
ATATCCTCTAGGATCACCGGGACTGTTGCGACCGTGCGAATAAAAAAAAT
GGCATAAAGAGTTGCCTTCAGTCTGAAATCTACACAGTCATCAAGGTTGA
ACAAAGGACAAAACACACAGAGTATGATATACCGAATGACATACTCTTCA
TTTTTGCATCTTTCACTTCTTCTTTGACTTCACAATTTACTTAAGCGTTC
TACGACATTAGTATCTGTTTTCTGTGATATCTATTTTTTTCATTTGAGGG
TATGTATGTGCTCATTTTGCAGCTGCTTTGTGTGATTTTCAATGTGGTTG
GAAACTTTTGGGGGGAGGGGAATCGGACGAAAATGTATGCGTACACAGAT
GTCATCCAAATAATCAAATCAACGTGGCCTTATCATCCTTGGAATGTGTT
TGCATGGTTGTTAGAATAAACGTTACTTAATTCATGGACACACTTAAAAG
GTGGGCCTGGCACAAATCTATCTTACGTGGTCATTTGCAAATCTTCGTTG
CAACTGGTGGTAAAGGTGCTTTACCTTCCTAATCCTCCAGGTGGCGCTCG
CTGTTGATGACACCCACACAATTGACCAGGAGGCCTCGTTGGAACAGCGC
ATACAGCAGGTTACACATCTTATAGAAATAACCAATGGGGTGGTTTTACA
ACAAAATTAATTCTACGTTGATATAACAGCACATTTCCGCATTATCTAGC
TAACATAGATTGTAGATTTAGTACCGCCTTCCAAAAAAAATAAGTTTACG
TTAATGATCAATGTACATGTATTCGTTATGTATACGTTCCTTTTCATCTT
GCAATCTGAATGTATGTCAGTATCTATATGTGTAACGAACCCTGTAAGAT
TAGTCGTGATACGACTAAAGGGCATCGAAACAAACCAAATTTTAAGTTTC
GGGTTATTCAACAGAAATTGTTCTGTTTTCTACTTATTCGTCAGGTCGAA
TACATCCTAGAAGTAGAGTCAGAGTTCGGGAGGATTGTGGGTGATCGGCA
CTTCCGGGTTCCAGACTGGACGGCCAAACACAAGAGGAGCTGGATCGACC
AGGTGAGCAGCTCTCGTACAAACGTGCAAGTATTTACTTCCGAACACTGC
CCTCTCATACAACCATTCATGTCCTTGGTACTGAACGCTTCTCCACTCAC
TCATACATACGTGCATGTCCTTGGTACTGAACACTTTCCCTCTTACACAA
ATGCGCATGTCCTTCACACTAAAAACTCCACTCTCACACAGACTTGGGCA
TCCTTGTGACTGAGTGATTATCCCACAAACGTGCGTGTCCTTGTTACTGA
ACGTAATTTTTGTGTCCATTTCAGGTTTTCAATGTGAAGAAAACCCGAAT
CAAAGCAGACCGCCGTGGTGGAGGCATGACCAAAGCGGGACTTGACATGG
ACGCCAAGAGGCTGTCTCGGGTCTGAGCCTACATGTGTCGTACTGTGCGC
TTCCTTTTCATTTTGTAGCCTAAATAGCTCTCTGTGCCTTTTATGGGGGG
GGGGGGCTTTTGCTGATGACATCGTTTTTCTGCTGGGTCGTTTGTGATAC
AGTATCTAGAAAAACAAAATGTATAATTCGTTGAAGAAGGTTAGATTTCC
AGGTAGTAAGATACGCCAAAAATAGTTACTCAAGTAACTGGATAAAATTT
TGAAACAGTCAGGCGTTTCAGACAGCATCCGCTGTCTTTCAGTCACTGAC
GAAAGATAGCGGATGCTGTCTAAAACGTCTGTTTCAAAATTTTATCCAGT
TGCTTGAGTAACTATTTTTGGCGTAAAATGTATAATTTGCTAAATCTAAA
TGATGATGAAGGTTGTTGAAATAAGTGAACTCGCAGTTTATCATATGAAG
CACGGGCGGATGTCATCCAGAAAATCAAGTCAGTATGGTCCTAAGTAATA
ACAGTTTATTCTACAATAAAAAGCATTTGGTAAAATGTAACGTTGGGTAA
CATAAATAAGCGGGGTACTTAAATTCGGGATTTTTCGAAAACGGGGTGTT
TAGGGATATGTGCTAGATGCAACATCAGTAATACCGCTAGAAATGCAAAC
TTGACAGACTAACGCATTCAGATCACTGTCTGAAAAGCTTCGATAACCAT
GCATTAGAAGTT Coding sequence (CDS) from alignment at Sc0000228:314549..318260+ >transcript:BL96269_cuf6 ID=transcript:BL96269_cuf6|Name=transcript:BL96269_cuf6|organism=Branchiostoma lanceolatum|type=CDS|length=435bp|location=Sequence derived from alignment at Sc0000228:314549..318260+ (Branchiostoma lanceolatum)
ATGACCACTGTTGGCATGATGATCGGAGAACTCGAGCTGAACGAATCCTT
CATCTCAAGTGCCGTCGAATACAAGCCCGGCTGGAGCAAACCCGTGGCCT
TCCTCTTCCTCCTGCTCTTCGTGTTGTTGATGAACATCGTCGTTATGAAT
CTCTTGGTGGCGCTCGCTGTTGATGACACCCACACAATTGACCAGGAGGC
CTCGTTGGAACAGCGCATACAGCAGGTCGAATACATCCTAGAAGTAGAGT
CAGAGTTCGGGAGGATTGTGGGTGATCGGCACTTCCGGGTTCCAGACTGG
ACGGCCAAACACAAGAGGAGCTGGATCGACCAGGTTTTCAATGTGAAGAA
AACCCGAATCAAAGCAGACCGCCGTGGTGGAGGCATGACCAAAGCGGGAC
TTGACATGGACGCCAAGAGGCTGTCTCGGGTCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000228 | genome | Sc0000228:314549..318260 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96269_cuf6 |
| Biotype | protein_coding |
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