transcript:BL96277_cuf5 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96277_cuf5
Unique Nametranscript:BL96277_cuf5
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96277_cuf5

>transcript:BL96277_cuf5-protein ID=transcript:BL96277_cuf5-protein|Name=transcript:BL96277_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=403bp
MDDRCFPNPYGDYNAGSVQLLEPDGQLLASLAGRIRAALPGLLKQVEDGQ
RSESGHDYSVYTGSTGISLLYLHLAQVFKDDARDDFLKKALEWVQPGLKH
LKRKRLTFLCGDAGPLTVGAVIYHRMGLQEARDGCLSKLQALSLDALNLR
SDLPDEVLYGRAGYLYALMFVRKNISDHAVDEKLVDKVVQAIVSSGQVLS
RQEKSSSPLKYMWHGKHYVGAAHGMAGIYCQLMQTPSAAAKAALPGLVKP
SVDYLRKLQFPSGNYPSSLGNTSDKLVHWCHGAPGAIHTLMAGYRAFQDG
VYLDEAKLCADVIWQRGLLKKGYSICHGTAGNGYAFLSMYRLTNDKMYLY
RAAKFAEWCLDYGKHGCRTPDRPFSLFEGLAGAVYFLADILNPESARFPA
FEL
Run BLAST on NCBI

mRNA from alignment at Sc0000545:81882..94059-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96277_cuf5 ID=transcript:BL96277_cuf5|Name=transcript:BL96277_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=12178bp|location=Sequence derived from alignment at Sc0000545:81882..94059- (Branchiostoma lanceolatum)
ACCGAAAACTATGAATATGTAAATGAAGCGAAGACAATTTTTTTTGATGG TCCAATCAGAAACTAAAGTAAGACAACGTTGAGTCAATTACATGTACATG CAGCTCCTGTTGTTTGACTAGTGGGGTGGTAGGTCAGGCTAGGGCCCCAA GTTCCAGACAGTTCTACACATACATGTAGGCCTCCTTTTCCAGTTGAGGG TGGGATTGTGGGTTCTCTCTTATATTGTATATTGCCTAGCTAACTCCATG TTCAAACCATCAGGTGGTCTAAGATATCTGTGGATTCGAGATTAAAATAN AACACACACAGAAAACGGATTCTAATATCATACAATGCCTCTTTTCCTAT CATAAAACTTACTGATTTTGTCATACACTTAATCCTTATACAGCATGTAG TTTGAGCCCTGATAAAATTTTCTTAAGTCTCCCCAAAAATGTGAAAGAAC AGAAAGAGACAATTTCTTATTTGGTAAACCATGTGCTGTAAGTTCAGTTT ATTTGTAAAACTACCCTGACCACTTAGATTTCATTATAATGATGGTAACT TTTTTTTTTACCCAAGTTTTATTTTTAACGCACACACCCATGCACGCACA CATCAATCTTGCAGTGCCCAGAGGAGGTCATCCATATAATCAAATTGGTA TGGTCTGATGTAGATTTGAAAAGGTAACTCCACGTACCTTAGATGTATTG ATTTTATTTCTCATGACTGTCCCACTCAGCTTGGAATCACTGGTGGAGGA GGAGGTGGAGCGCAGGGTGCAGGAAGTCAAGCTGGAGCAGGAGCGCCGCC TAGCAGAAAGGGACGAGAAGCACAAGCTGGAGCTGCAGCAGCAGAAGAGG GAGATGGAAAGGGAGATGAGGAAGATGAAGATGAAGTACCAGGCTAGGTA GGTCTCCTCACAGGGACTCACATAGTTGTTGTTTACCTTGTAGTGTCTAG TGGCACATAGGGCAACAAGTTTCCTTGCTGCTTCCGTAGCATGGTACGTG TATATTTTTACAGGAAGGGGTTGCTAGGCCCTTCCCCTATAATGTGCTCG AGGCACCTCCTTGAACATGGGACCCCCATTTTACGTCCCTTCCAAAAGAT GTTTGCAGGCCAAACTGGGATGTCTATTCCCAGGATTTGAACCAGGGTTT CCTAGTTATTAGCCAATTGGAACCAGGAGCTCAACTGTGAGGCTGCTACC AGTGAGCTACTGGGACATCCCTTCACATGTTTGTGGTAGAGTTAATTAGC TTGTTTATTTGTTTGAGACTTTATTCATTCACAACAAAGTCAAATCTGCC TGTTGGCAGCTTTTTATTGAAGTCATGAGGGAAGAGTTAAGTAAGGGTCA GACAAAATACATTTGTATAACAAAGGTACAGATTATATGATTGAAGTCCT AATAAATCCATAAACATCTTGTCCTAATTAAACTATAAACATATGATTTG GTAACATATACGTGTTATTACAAAAGCTTGGATACAATCTTTTTTTATTT TAGAATATTAAACAAATTAATGAGTGGACTGAATCTAATCCAGAGGACAT CCAGACAAGGATGAACTGTCAGCATCACACTACACAATACAAAACAACTT CTGTTTGTGAGTAATTTTCTGTCAGTAAATTGTTTCAGGATCAAATGAAC TGAAAGCTTTTCAGTACTAAGGACAGTGTCATAAAATGCCATTTAAAGAC TTAATCAGATGATAACAGTTCAATGATTTAGATAATGTCAGCTTACAGCC TACACCCTTTTGTCTAATCTTACATAGAGAATACAACATGATATATTCTG TATCACCCAAGGTCCTAGCACCAAAGGGTGATCCGACCCACATGAGGGCT GAGACCGAGGGTGAAGCAGAATGCATCATGTTGTATTCCTTTTATGACAT ACCCACCTGAGAAAACACACATTTCAATGCAAAATGAGAAAATCTGGTGT CCTCAAATCAAGAAATTGTATGGACTAAGATTGCAACGTCCATATAGAAT TTTCCACAGCGACGCTCGCAGCTCATGGCGCAGTGGCAGGGTGTCCTGGG TTCAAATCCGGGGTCCCCTGATTTGTCTCGTTGACGTCGCACCACCTCAC TTAGGTGACCACTTCACTTGAAAACGAGTACTACATGTACATGTAGCTTC GATTAGGGACATCCCTTGGATAGGACGTTAAATGGAGGTCCCGTGTTTGA GGAGAGCCACACCTCAAGCACGTAAAAGAACCCACCACGCTTATCGGAAA GAGTAGGGGTCCTTCCCGGTGTGAGTGGATCAAATATATCTGTCCGGATA TGCAGCTTCTACTGTTCAGTACAAATCAGGTGCGTTATGCCATGAGGCGA TTTACCGGATATACAATACAAACAAATACAAACAAACATGCAAAGCGTCT TGGAATTATTCTATGGAAGCCCATGTAATATGATACAAGTAGAAACATGT GGGATACTGTAGAATTCCGGTTTATCATATGCTATTCTGTCCCTTACTTT ACAGGTCCATGCCATCCCTGGCCACAGGGGAAGGGAGGTCAAGTTCTAAT GACAGACAGGCAGCCGTACAGGTAGGGTTTATACATCTGTTGAATACTAG TGTTGCAGAAAATGTTTGTTAACTAGACTCTCCATCTAGCAATTTATATC TCATAGCTCATCTTGTTGCCATCTAATACATGTTGTCTTCGTTTTGTGTT TGTTGTTGTTTGCAATTTGTAGTTTTGTGACGTGTTTCCATAGCACTGAC TGCTTCATCTTCATCTCGTAAAGTTTTTTTACTCGTAAAAAAGATTACTT TGACTCCATTCATGTAACTGACCAGTCATTTGATGGAAAACACATGTGCG AATTATGTTTACAGTTGAATTATTTCTTTCTTCAATTCTGTAGCTTCCAT TGTTGCATGCTCTAACATTCTAATGCCTGCACGGTTGTTTCCTTAGAGCC CAACCGACTTCAGCTTGAATAACAACCGTAGACACAAAACCCTGAAACTC AAGTATGATGTGAGTCCCCCTCTCATTCAGATAATTAAGTGGACAGGTAG TTCTGGCCTTACCTTGATTATTTACAGCAGCTGCATCAATGCAGATGGTA GGTGGAGGTACTTTTTTTGTCACAAAGAGTATCCTAGTATGGATTTAGAG AGATTGAGCTGATTTGTGCTGGTTTGCAAATGCTTGGCAAAATTTGATGT AGTCCAGTCAGATATCCGCTTTGCACAGCTGATATGAAATGTTTACACAC AGGGTAAACGGCTGAAGTCTGCGTATGCAATTACATTGTATACATTTAAT TCTAATCTTGACAGTCTGCATTTTTTAAATACTTCTTGATAACTGTAGAC GTTGATGGCATTGACATACTAGGTGTGTTGGAATACAGTTTAGCTTGACT AGCAATAAGAGTAGGAAATGTTGTTTGCACAAATTTTCTCAGTACTTTGT GACAACTTCTTAAAGGAACTTTCCCAGACATAATGATACAAGATATCCCA ATCATGCTCCTACTAAGGAGCTTCATAGTTCAGGACTAACTTTGTACGTT GCGTTCCACAGGCCATTCTGAACAGACCAGTGGACCTGGATGTGACCAAG ATTAAGGACCCCATCAAAATAACCATTCCCCGCTTTGTCATGCGAGGGTA CGGCAAGGAGGAGCACTTTGAGTTTGAGGTTAAGGTTTGTATCATTTAGC TTCAAGTTATGATTGTTACGCAAGATGGCAAGATGGTCTTGTGGTTAGGG TTGCTGACTTAGAATCTAAAGGTTCTGGGTTTAAATCCCCAAATTTTACC ATGGTCAATACTGACCCACGGAGGCCATATATACACCAGGTCCTATTTTC TCTCTCGAAAGAATACCTAGCTTCAGTTGAGGATGTCCTCTCGGATGGAA GGTAAAGCTGTTAGGGGAGAGCCACTCCTCGAGCATGTTAAAGATCCTAC CACATGTACATTTATTGAAAAGAGTAGGGGTCCATCCTGGCCTGAGCGGA TCAAACCCCACTGTCTGGTCTTGTACCCACTGTACAGAACTGGTGTGTTA TGCCTAAAGGAAGTTATCCAAAACAAGCAAATAAACAAAATTACAAATGA TTTCTTGCTTTCATACACTTCCTGATAACTGCTGTTAACTGTACAATGTA TTATTTGCTGCATTTTAATGTCCATCTCTAGACGGATGTGCTGGGTGAAG TCTGGACCATCTTCAGGAGATACAGCAAATTCAGGGAGCTACACGACATG ATGAAGGGCAAATATCCCGAGGTCTGTAACCCTGAAATCCACCTTGCTAC TGTAAATTGATTTATTTTGCTAGGGACTATTCCGGCAGAAGGAAAAAGGA GAATTTGCAGTGTTTCAATTCGCAGTTAAAACAATTCTGTTGTACAGTAA TAATGCGTTGGAAACGTGTCGTGAACTTTGCATCGCTAATGCATAGGACA CAGCAAAAACCAGGAAAACAAATAATCACAAACATTTCAACATTTACGTT ATGTGTGATACTTCAGATGGTAGTTTCACTACCTGTTGACAAGTGTCCTG GTTGAAAGAATGCAGTATGTAGTATGTATGTATGTATTAATTACATGAGG TAGTTTGAAGAGGAAGCCCAATGTGAAATAGTGTCATGTTCACATTCACA TTTTCCTCCCTTTCACATTATTCTACAGATTAATGCGCTGGAGTTCCCAC CAAAGAAGCTTTTTGGCAACAAATCTCAGAAACTGGCAGAAGAGAGAAGA GTTCAATTAGAGGTAGATATACACGGGTAGTCTTAGCATAAAAGCTCATC TGAGTTGGTAAACTACATTATGGAAAGGTTAAACTATTCTCCAAGTAAAT AAAAATGACTTTTGACCAGGGCTGTCTCCAGCTGTACATATTCTTTTGTC CCACTCACTATTTGGGACCACATGTTGCTAATTTTATATGTTAAATCCAT CATTTTAAGATTTATCTGACCCATATCAATTTATCAATCCTTTTCTATTC ACCTTAGTGTTCAGGAACTGTTCAATTTTGCTTAACCTTTCTCATGCTAC CTGGCGCCATAGCCAACACAACCTTGGTGCCAAACAGCTACCTTAGCAGG TTAAAATGTTGCTGTTATTTTCACCAGGCTTACCTGAACAACTTCATCGC CGTGTGTCTCAGGAACAAGGCCAGTCCACTCTACCCACGTAAAGACAAGC CGTTCTCCAAACGCACTCTCTGCGACTTCGCACCATTCTTTAGAAAGGGC ATCTTTGAGTCCTCTGTGTATCAAGTTGTATAGAGAGCATTTCTCATTCC AGCTTCAGACTTGTGGTACGCATGTACAACTCACAAACCTACCAGAGGTT GGATTTTATTTGCTGCTTAATGATACGGGGTGATAAATGAGTTCTCAGCC AGAAATAAGGTCCAAAACTCAGATTTTGAGGCATAATGATAAAGTATAAA GCCTTTTATCAATGTCTACAAAAAATTCAAATCATTGTGATGATGATCTT TACTTTGCAGGCGACACCCAGTAACATTAGGTAAGAGAGAAGGGAAAGAC ATTGAGCTGCGAGGTGTGCGGGTCAACCTACTCTGCTGAAAGTCAGATGC CCACTTCTTGAAATACGAAGGGACTTCTGATCAAACATTTTCACAATGTC TTGGTAAATTTCATGACATGAGGAACTCCACCCACACAACTCAGGATNAC TCCAGGATCACATTTCACCCTAGTTTTTCTTGCCACGTACCTACTGGTTT TCAAAAGAACGTTGACTTGAAGTTTATGACCACAATGATTTGAAATTTGG TGGATATTGATTCAAGATTTCATACTATAATATGATTACGCCCAAAAAGT TGAGTGGTACACCTTATTTCTGGGTAAGACTGAGAACTAATGGATTGCCC CTTGTGATGATGCAATCCATATAACAGAAGCAATGGGAACTCATAGACTT AACAGTAGTTGTAGTGTGAGCCGCCTCAGAGGTTTTTACTTGTACATTGC CATCTTTAATTTATAAGGGCATTCAAGTAGAAATATCATGAAGGGTGAAT GTGCTCTTCCTGGTATTGCACCAACTCTCTTTGCCATCTGCGAACACCAT CCTAGCTTTCTTTTTTCTTGCAACCAAACTATGAACAAATACAGATGAAA GCCTTTGTAAGACAAACTACATGTGAAGAAAACAAGCATAAAATTTACAT GCTCTGCTTTCACATCACTGTAAAGATGTATTTTCTATAGTTGACCTATG TGAATAGCAGTGAGCACAATTTTCAGTCAGAGACTCCTAGTGATTTCTCA CCTGAATATCTACCCCATCACATTGGACAGGTGACCAGCAAACATTGGCC AATCTCTAAAAATTGTGCGATGATGGCGAGAACACCGGGTGGAAAAGGTA ATTTAGAGCTTGCAGACTTGTTGGCTGATCATTTTCTACCGTTTGACTGC GGCTTAACGACAGTGGTAACTTCAGCAAATGAAGATGAAGCCTGGAATAC AACTACCAATTAAAGAACCTTCTGCATTCCTGTTAGTTGAACTTAAAGAT ACCCTAAACTGTAAATCATACACATACATGTATGTTTACATCATGATGTT GTTAAACTTACTTGTACTTGGATATAGGAAAATAAGCATACCACTTCAAA GTGCCTTTGACTACAGCAATACAGGGATGTAACTTGATATGTACATCAGT ATCATCAGCATTCTACAGAATGATGTGAAGATTTTGGCTTTGTTTAACAC TTATTCATTCAAGAAGAGAGGCTAGGACCAGATTTCTACTGGACACCTCC CACTGAGACAACACTACAATGTATATGACAATATTGTACAAATGTAATGT ATTTATGGATGTAAATAGTTTAATTTGATTGGCAAATATCCAGAAGAATG GATGTACACCAATTATTAATTGAGAAGAGCTATCTACAAAGTGTTGCATG GGATATGTTTTCATTTATATGTTCAAAGAAGCCATTGCTAGCTTAGTGCT CAAGTAGTGGTCACACAACTTATGTGCATGAAGGAAAAGGTTCTCCAGAT TTGTAATTACTAAGGGCTGTTCTAGGAATCAGCAAAAATAAATAAATAAA AAGGTAAACAGAGTTGTGTGAGAGGAAGGGTGTGGTGGGACGTTATTTAA ACTGTACAAGTATTCAAAATAAAAGTATTGGTAGGACAATTGGAAAGTTC TTTTTGAAAAGTAAGGGAACGTTGGGCATTCTTCTAAAGCCTTTATAGTG CTTGTACATGTAGTACAACTGTGGGAAATCCGAAAGTAGTGTACAGTGAG TTATGACTATGAACTGTAGCATCAGATTATTACAGCAGAACAATCATGAA AATTTATAATGATAAATTTAAAGGTATGAATTATTTTGGTACAGTTTTTT TTAAACTGTTGTAATGTTAAGCTTAATGTGAATTCTCTGCATGCAATGTT GTAATTGCCGTTTTTGTTTGATACAGATGTATATGTTTGATGATGTTAGA TATATATCAACACCCATTTGGCCCTTTTGCTTGCCATTTACAACCATGAG GTTTTTTTACATTGTTTACATGTTCAACTGCAGATAAATGCATAATTTTT GTTAAAATGCTATGGTGCTGTTAACGTCACAACTTCAGGATAAGATTTTC TTGAATCTCTTGTATCAATCAATAATCAGTGGTAAAGTAAAGTATCAACA ACAACTGGACACCATTTAATCCTTGTCTGACATTGGTACCTCAGTTGCTG TGTGTTATCAGACATGTACAATATACAGGAGTTGTTGTCTTGCTGTTACA ACAGAATTCATCACGATATCTGTTGTATGCTTGATCATCGTTGTATCAGA ATTTTGTTTGTTGCATGCATACGACTTTCAGACATAACTTTTTAGAAACT ATAGATGGGATGTCATCCAGAAATATACAAAGATATGTTCTCCTGTCTGT CAAGAAGACACCCCACTCAAAGCCATGACATTTTAGAAATTTTATTAGAA TGATTCTTTATCCCAATGTGGCACGTTTTTTTTTTTCTGTGGTATGATTT GCTTCCCTCCCAACTATTAAGTACAATGATCACATCAGCTGAAAAGCTGG AGGGTTAACTTTAAAAAGTATGTGCAAACCAAATATGGATCTTTAGCAGG CAACGTTACATGCAATATTTTTCTGCTGAAAAGACAATGATATGATACAT ATAACGTTATATAAAAGATTTCTGTTAATATCAAAAGACATGCTATGATA CATGTATTAAAGGAAAAAAGGACATTTGCAATGTAATGGAGCCCAGTGTC TTTTCTATTCACGGTTACGTCAGATGTTTTAAGAAAGGTTGCAAAGTTTC GAGGAGAGAATACTAGTAGCTGCTGCATAGTGGTGTTTGACTTGGTCTCG CTAAGCGGCGCTGCTAGACGGTAAATTGAGGAACTGATAGTTTACGACAT GACGAACGTTTTTCGGCAAATAGAGGGTTCTGGATAAAGGGCAGGTGGGT CTTCGCATTTTGGACAAATTATGCTCAAATGTCATATTTTGCGGTTGATC CAAGCATAGTAATAATAAGGTAGCGTTGTAGAAATATTACAGTAAGTGTA CGTTGATTTGGGGCTGATACGGGATAACGCATACACGCATTAAATATACA AGGATGGGCGACATGTCCGTTTTGGGGGAGGGGTTAGTCCAAGTCTGGGT GATTTAGACAAAGGGATGTTCGCATTTGTAAAATATGAATCGTAAATGTG GCACTTGCTTTTAAGTACCGCTGTGTGCTAAGACTGTTGAAGATGTCAGG TGAGCCCAGGTCACAGTTGAAAGGAAATGGCTATTGACAGGATTATCCTA TTAACAATTTTTTGCACTAACAAAGAGGAAAAATTCTGTTATTGTCAATA TGTTAGATGATCCTGTCAATAGTGCATTAATTTCTGTTATTGACAGGATC ATCCTGGCAATGGTGCAAATTGTTACGCTATTTTCTGGACTTTTTCTGTC TGGAAAAAGTTGCATTATTGACATGATCGTCCTGTCATGTCAATAGTGCA AATTTTCCCACTAAATTTGAATGGATGATCCTGTCAATAGTACAAATTTT TCCACTATTGACAGGCTCAATAGCCTCATCATGCCAGTTGAAACAGACCA CTAATGAGTATACCACTGGTCTGTGTCAAGTGGACGTAAAAAAGTTAAAT GATGTATGTTGCTGGTTTTGTTCAATATTGCATCACAAAAGTATATCAAC ATGAACATATCTCTTCCAACCTTACTGTTACTTCAGGGTGCTTACTCCTG AAAACATCTGCCCGTGGGAAAGACTGAGTACGATCTGCTGTACTTGACAA CATGGCAGCCATCCCTGTCCCGTGGTCGACCTCAGCTAAAGTATTCGCTA TCAGCTTCATTGTGGCTTTTGTTGCTTTCTTCATCCTTCATTACCAAGAA ATGCGCCAAAAACTTGAGCAAGAAGCCTTTGAGAAGGCTGTGAAAGACTT TTCAGAGAATTGGCATTGAACACATGGTAGTTAGCTTGATATAAGATATT CAAGCTTGTTGAGACCGCACTAAGTAACTATACGAAAGGTGCCATGGATG ACCGATGCTTCCCCAACCCCTATGGTGACTACAATGCAGGGTCAGTACAG TTGTTAGAACCGGATGGTCAGCTCCTTGCCAGTCTGGCCGGCAGAATCCG TGCTGCCCTGCCCGGCCTGCTAAAACAGGTGGAGGACGGACAGAGATCAG AGTCTGGCCACGATTACTCTGTCTACACGGGCAGTACGGGGATCTCGCTC CTCTACCTGCACCTGGCACAGGTGTTCAAGGACGACGCCAGGGACGACTT TCTCAAGAAGGCCCTAGAGTGGGTCCAACCAGGACTGAAACACCTAAAGC GGAAGAGGCTGACGTTTCTGTGTGGAGACGCCGGTCCCCTGACAGTAGGT GCTGTGATCTACCACAGGATGGGGTTGCAAGAGGCCCGGGATGGCTGTCT GTCCAAGCTACAGGCCCTGAGTCTGGACGCGTTGAACCTGAGATCCGACC TGCCTGATGAGGTGCTGTACGGTAGAGCCGGCTACCTGTATGCGCTGATG TTTGTTCGTAAGAACATCAGTGATCATGCGGTGGACGAGAAGCTGGTGGA TAAAGTAGTGCAGGCAATTGTGTCGTCTGGACAAGTCCTCTCCAGACAAG AGAAGTCCAGCAGTCCTCTGAAGTACATGTGGCATGGTAAGCACTACGTG GGAGCGGCCCATGGTATGGCTGGTATCTATTGTCAGCTCATGCAGACGCC GTCGGCTGCAGCTAAGGCAGCCCTGCCCGGTCTGGTCAAGCCGAGTGTCG ACTATCTGCGAAAGCTGCAGTTCCCATCAGGAAATTACCCCTCGTCTCTT GGGAACACGTCGGACAAGTTGGTGCACTGGTGTCACGGAGCGCCAGGAGC GATACACACGCTGATGGCTGGCTATCGGGCGTTCCAGGATGGGGTGTACC TGGACGAAGCCAAACTATGTGCCGACGTTATCTGGCAGCGCGGCCTGCTG AAGAAAGGTTACAGCATCTGCCACGGTACTGCCGGGAACGGCTACGCCTT CCTGTCCATGTACAGACTGACAAACGACAAGATGTACCTCTACAGAGCGG CCAAGTTTGCGGAGTGGTGCCTGGACTACGGGAAGCATGGATGCCGCACC CCCGACCGGCCGTTCTCACTGTTCGAGGGTCTGGCCGGAGCAGTCTACTT CTTGGCAGACATTCTAAATCCAGAGTCAGCACGATTCCCGGCATTCGAGC TGTAACAGGAACCTATTAGGACTCTAAACAGTCATGGCGGAAGTGAACTT TCATGTCATTAGAAATGCTGGTAAAATAGCAGCTGTAGAAGGATACTTGA TAGTACTGTAACAAGGGCTCTGTGCAACAAAAAGTTGGCTAGGAACCTGT AGTTTAAACCTCTCTGTACTTCTGAAGGTTTTGATGAGTATTTTTTTTCA TATTCAATTTATTTCAAAAGAATAGTTATAAATATTGACAAATAACAGTG TTTCTGACAGAATTCTGCTCATTTGTTGAAAATTGTTCGGGTTTGTACAT GTGCATGTACATGTTGATGACATTAAGACTAGCAGTGTATCTTTGACTTT GTACATTATGGACTACATAGACATGGCTGAGTTCCCATCTGATACAGCAA CAAGCTTAAGCAGTGCAATAGTTACAGTTGATGGAGTCAGGTGTATTTTG AGTATTCCCATTGCCAATGTAATGAAGGAAATGTAACTTGTCATCACACC AGCTGAAGTCCGTATCAATGTCAAGTGCGACTGTACTCTCTACCCAACAT GGCCCATCTTGTCTTCAGCATTTAGAACACAGACTCCAGCCATGTGCTGT AGTACTGGTTAAGTACATGTACTATAAAGTCAGATATGTTTGTGGGGGGT TGATTTTGTGGTAGAAGGGAAAATGAGGTTTTGGCTGTTTTTTAGTTTGC AGTTGAAACAATTGTGTAGTACAGTGGTGATACATTAAAAACAGATTCGT GTGTCACTGTTGAGTGTGTCATTGCGGAAATATCACTCAAACAATGGAAG ACTACTCAAAAGACAGAAAGTGAAAACACATTAAAGAATTCTCTAATGTT CATCAGCCTGTCAACCTTTCATTAGTGTTAACCATCTCCCAACTCCCCTA GCCTGGAAATAATACAAAGTTATTGCTAGTCTCTACCAGACTAACCGCGT CGGCTATAGAGAGAATATTTGCCGGGGGACTTTGGCCATGGAGAATAACG TTTCCATCAGATTGGATCTTATCTCCGTAGCCGACTCCCTTCAAACATTT GACTCTATTTCGCCAATTTCTACTATTTTCCCACCGACCCGTGGAGACTG GTAGAGTCTAAGTTAGTGCCAACAGGCTGCCCCAACCATCGTCCTAAAAG GGGTCCCCCGAAAGTGCGAAATGGAACGAACTAAAAGAAACATATGTAAC ATTATGAAATGAAATAGAAGTAGTTAGCGAAATATAAGGAACGTTGTAAC ATTCACAGTAGACGGGAACAGGAAGCAAATACATTATAAAACGTGTTTTC ATTTCCTGAATCTGTTTGAAAATAGTAAAAACAACGTTTTTGCCGGGTTT GTGTGGCTAGATTCTTCCTTGAAAATGG

Coding sequence (CDS) from alignment at Sc0000545:81882..94059-

>transcript:BL96277_cuf5 ID=transcript:BL96277_cuf5|Name=transcript:BL96277_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=1212bp|location=Sequence derived from alignment at Sc0000545:81882..94059- (Branchiostoma lanceolatum)
ATGGATGACCGATGCTTCCCCAACCCCTATGGTGACTACAATGCAGGGTC
AGTACAGTTGTTAGAACCGGATGGTCAGCTCCTTGCCAGTCTGGCCGGCA
GAATCCGTGCTGCCCTGCCCGGCCTGCTAAAACAGGTGGAGGACGGACAG
AGATCAGAGTCTGGCCACGATTACTCTGTCTACACGGGCAGTACGGGGAT
CTCGCTCCTCTACCTGCACCTGGCACAGGTGTTCAAGGACGACGCCAGGG
ACGACTTTCTCAAGAAGGCCCTAGAGTGGGTCCAACCAGGACTGAAACAC
CTAAAGCGGAAGAGGCTGACGTTTCTGTGTGGAGACGCCGGTCCCCTGAC
AGTAGGTGCTGTGATCTACCACAGGATGGGGTTGCAAGAGGCCCGGGATG
GCTGTCTGTCCAAGCTACAGGCCCTGAGTCTGGACGCGTTGAACCTGAGA
TCCGACCTGCCTGATGAGGTGCTGTACGGTAGAGCCGGCTACCTGTATGC
GCTGATGTTTGTTCGTAAGAACATCAGTGATCATGCGGTGGACGAGAAGC
TGGTGGATAAAGTAGTGCAGGCAATTGTGTCGTCTGGACAAGTCCTCTCC
AGACAAGAGAAGTCCAGCAGTCCTCTGAAGTACATGTGGCATGGTAAGCA
CTACGTGGGAGCGGCCCATGGTATGGCTGGTATCTATTGTCAGCTCATGC
AGACGCCGTCGGCTGCAGCTAAGGCAGCCCTGCCCGGTCTGGTCAAGCCG
AGTGTCGACTATCTGCGAAAGCTGCAGTTCCCATCAGGAAATTACCCCTC
GTCTCTTGGGAACACGTCGGACAAGTTGGTGCACTGGTGTCACGGAGCGC
CAGGAGCGATACACACGCTGATGGCTGGCTATCGGGCGTTCCAGGATGGG
GTGTACCTGGACGAAGCCAAACTATGTGCCGACGTTATCTGGCAGCGCGG
CCTGCTGAAGAAAGGTTACAGCATCTGCCACGGTACTGCCGGGAACGGCT
ACGCCTTCCTGTCCATGTACAGACTGACAAACGACAAGATGTACCTCTAC
AGAGCGGCCAAGTTTGCGGAGTGGTGCCTGGACTACGGGAAGCATGGATG
CCGCACCCCCGACCGGCCGTTCTCACTGTTCGAGGGTCTGGCCGGAGCAG
TCTACTTCTTGGCAGACATTCTAAATCCAGAGTCAGCACGATTCCCGGCA
TTCGAGCTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96277gene:BL96277Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96277_cuf5transcript:BL96277_cuf5-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96277_cuf5-E1BL96277_cuf5-E1-1564476830-480597Branchiostoma lanceolatumexon
BL96277_cuf5-E2BL96277_cuf5-E2-1564476830-480595Branchiostoma lanceolatumexon
BL96277_cuf5-E3BL96277_cuf5-E3-1564476830-480593Branchiostoma lanceolatumexon
BL96277_cuf5-E4BL96277_cuf5-E4-1564476830-480591Branchiostoma lanceolatumexon
BL96277_cuf5-E5BL96277_cuf5-E5-1564476830-480589Branchiostoma lanceolatumexon
BL96277_cuf5-E6BL96277_cuf5-E6-1564476830-480587Branchiostoma lanceolatumexon
BL96277_cuf5-E7BL96277_cuf5-E7-1564476830-480585Branchiostoma lanceolatumexon
BL96277_cuf5-E8BL96277_cuf5-E8-1564476830-480582Branchiostoma lanceolatumexon
BL96277_cuf5-E9BL96277_cuf5-E9-1564476830-480579Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000545genomeSc0000545:81882..94059 -
Properties
Property NameValue
Transcript idBL96277_cuf5
Biotypeprotein_coding