transcript:BL96291_cuf9 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96291_cuf9
Unique Nametranscript:BL96291_cuf9
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96291_cuf9

>transcript:BL96291_cuf9-protein ID=transcript:BL96291_cuf9-protein|Name=transcript:BL96291_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=821bp
MYWTDSAYWKPRIERAAMDGSERTILISSGLDTPIGIAIDLNERRLYWSD
ASASNVQSSDMFGNNRRTLVFRSSTSFFDLSLHVNDLFWTSRSEFIGINA
KSQEGQVSNRVLADGFSSARGIAVYGAGLQADVTNACSESKGGCQDLCLA
RPGGRTCVCRAYFVLQSDNTTCAPSEIKAPSYLWINLLEGGLTLVRMFEG
NSSSIRNLAQQTVEVTNLLAAKSPSIIVSLDYDIRLGLVFWIDVGLKEIQ
QVDVKTGKVTTLINEISTGAEVLATDWVNKNLYYTDYNYNRVVAVSYSTD
NSNGNSHIITETGLDKPRGIAVDPTAGFVFWSDWGQSPKIERSTLSGEDR
TTIVEIGLGRPSGLVIDYVKKRLYFADTEHDIIDSCDFDGVNRQRFYSLS
GTHFYDITFDGEEIMATDWSDNTINIIHTSRDIRAYRAASVRRVLGVEFY
DESRQPSAQSDCKLNNGGCQQTCVGDRSGHKCLCLPDYNLAENMKSCVRN
DHLFTKALLVSTDEGILQFQHNLVDLPQTADSKPAVLVSGGKTVAMDFNY
NEKAVYYVQEVDGQMNSIQKLELTSSQSSTIYSEGQGIAGIAVDWVTSNV
YWTDGGTGGMISVARLDGSSRKILMSYRNDPRGIAVHPVQKLLYWTEVGG
GSPSISRSTLAGTEQEKIISPDLGTSIRKPTALSIDFLNSRLYWADSEAG
TVMSSDLRGKDPQQHWTSNGGELFGIAVYKEFNFWTDRTNQTVSIGLRST
LERTVQLQTTPHSVRVFDGSEQPLSRGPCDLQNGGCNELCLPTTADRKIC
ACAGGNMLQPDGITCINPADV
Run BLAST on NCBI

mRNA from alignment at Sc0000036:783163..798522+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96291_cuf9 ID=transcript:BL96291_cuf9|Name=transcript:BL96291_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=15360bp|location=Sequence derived from alignment at Sc0000036:783163..798522+ (Branchiostoma lanceolatum)
GGAACTGAATAGCCCACAAAATTTATTCTGGTCATTAATTGGAAACGTAA TGTGGGGAATACACGCTTTTAAGGCAATGTTTTGGGACCACAGCCTTCCC AGTGCAGCGACACCTAGCAGTAAGAAGTAGAATCAGTATTGCATTAAGAA AGGCAGCAGAAAGACTACCGACTAGCTTATGCGTAACTTCTCTTGTTGGT TCGAAAATAACTTTGTTAAACGTGTTTCTTACCCTTTAGGTACATGTACT GGACGGATTCAGCCTATTGGAAACCGAGAATTGAGCGGGCTGCTATGGAC GGCAGTGAAAGGACCATTCTAATCAGTAGCGGTCTGGACACCCCTATTGG AATTGCCATAGACCTTAATGGTAATATTTTCACATCTTTGGCTAGATCGG AACCCGAGTTATGTTACGGTCACCCATGCACCGTTGCCCGTAGAGGGTTG TAGCTCCGGCCGGGCTTCAAAGCCACATATTTGTACCGGTGCAATGTATG CCAGATAACTATGTGTTTCTACGAGTAGCTTACGGCGTCTATTTGTCACC GGGCCCCAAGTTGATTTTAACTGCGAGTTAAAACATTACGGGGGCCCGGC CATGCCCCAAAATAGCCCACAGGGTGTCCTATGGGACAACATTAGTCATG CTTGAAAGTGCAAAACACAGCCCGTAACCTACCCGACGGGGCCCCTTCTG TCCAATTGTGAACGTAGCATTACTGACAGAATGTATAATAGTATTTTGAA GAAAAAATATTGGTACCACTGAACACCTTCAACGCAGTTTTAACTTGTCA AGTGTTGCATGGTGTAAGAAGTTTGATTGTATCTAACTTTTTTTTTAGAT ATTACCTTAGCCTATTTTGTCACTGATGGACAAGAAGTCGACAAGTCACA TCATAATGTATCGTTTCCACAGAACGCCGTCTGTACTGGAGTGATGCTTC GGCGAGCAACGTTCAGAGCTCCGACATGTTTGGAAACAATCGGCGAACCC TGGTCTTCCGTTCCTCAACAAGTTTCTTCGATCTCAGCCTGCACGTCAAT GACCTGTTTTGGACTAGCCGGTCCGAGTTCATAGGAATGTGAGTAGCAAA ATTGAGCATTTTTACAAATAGCAATGAAGCAGGTGCTGGTCGCCATTTTG GTGTCCTTGTTTGCATTCCAATGAATAAAAGCTCAAGCTTTTTTTTCATA GTCAAGTTTTTTAAGTATAATCCCGCTCTTCTTGGAGCTGTAGTTATTTG TGAGGGCCAGAAGATCTTAAACATCCGCCAAAGTTATTATGACCCATTGA AATTCAAATAGGGACACCAACATGGCGTCGGACTCAGCGATGTCGTCACG AGAAAAAGCAACAATGTTCTATTGTTTATTATTTGTTTATTTGTTTATTG TTTATTCGCATATATGTATAATTATAAAAAGATACACAGGGCAAGAAGAA AACACGCAAGGGGGGGGGGGGGGTTGGGGGGGGGGGGGCGGCAGAAGCCT ATNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGTTGGGG GTGGTGAGGCGGCAGAAGCCTATGTGGCTTTTCATGGGCCTCCCCTAAAC TAGACAATGGGAATTTTTACAAACTTATACAGAATCAAAACTAAGCAAAA TTAACAAAAGAACAAATTAAAATTGTACCATAAATCCTAATGAAACAAAT GGAAAAGAAGAGGAACTACAAAATAAATAAGTAAATAAGTAAAAAAATAC TTAATAAGTAAGATTACGCTAATATATAATAAGTGTGATTGCACTATACA TTAGTAACCTTATAATGATTACAATATTTTCCAACATCATTTGGGACATC TCTAACTGCTTCGATGACTTTTTAATATCGAATGTGATATAATAGCATAA GCTTATTTTAACTTGTGTTTCAAACTGACCACAGAAATGCAAAATCACAA GAGGGCCAGGTATCAAACCGAGTTCTTGCCGACGGCTTCTCGAGTGCAAG GGGAATAGCCGTGTACGGGGCCGGCTTACAGGCCGACGTTACAAACGGTA AGGAGCTCTTGATATTTGACAAAGATTGCTCTTCTTGTACATTCGGGCAA TGTTGAATCACAGGAATGACAGTTCAGAAATATATTGATAATACAATGTT GACAATGTACGTTAAGAAGATTTTAATATTCGATCGATCCTTTTTTTCGC AATGGAGAAACACGGCTTCAAAAAGCCTACATAATGAACAATCGTATTCA CTTAAATTCAATGTTTGATCTTTAGGAAGCTCTTTTCCTCAAACTAAATT GCTCTCATTTGTCGGGCATATTCAAATCTATATGTTTTCTTCTTATTTTT GAATACACTAGCTTGCTCAGAGTCGAAAGGCGGTTGTCAGGATTTGTGTC TAGCTCGACCAGGAGGAAGAACTTGCGTCTGTAGGGCATATTTCGTTCTC CAGAGCGACAACACCACGTGTGCTCCTTCAGGTAAGTCTTGCCTTTCTTT AGCCAATATTTGTTTCCTAATTGTTTTATTGCATTTTTACATAGATAAAA CAACAACAATATGAGAAGAACAGGAAAGCATACTATAAGGAACATAAATA CCACGGATCCTATGAATATATAAACGTACTATATAAGTGGAAAGGAAACT GAACACAAATCCTATACATTGAAGTTTGCTATGTACAAATGAGAAAATTA TCCTAATTGGTAAACAAGGAAAATAAACATATAATGTAGCATCGAGAATA ACAATCTACCTTTTCTTCATTAACATGATAAAAATGAACTCCGCTAATGT TCGACGACTCCTCTGGTCCACTTCAGGATAACCGAGAACCATTAAATTAT TTACAACACGTGACTTTCCAAGAGGGTGTCGTGAGCAAAGTTTCACAAGT GTTTAGAAGTCGGTATTGGCCTCTGTCTCTAGATCTATTCAATGAAGGTT GATTAGTCTTGATCATGTATATCGTCTTGTAGCTATCTTCTTTTTAAATC TTAAGAGATTACAGGGCCCAGAAACAATGATGACGATGGACAGAATTGTT TACACACTACAAAAGTGGCGGACAACGCAACAATTTGCCACACACCCGAA CCCAGAACTATTTTATATTGTAAGTTCAGTTTTGGACATCGAAAACTGGT TACGAACGACATGCAGATATGTCGAGTTCATGTGATCAGTAAATAATGCA ACCATTTGTATTCACTCTAGAAATAAAGGCTCCGAGCTACCTCTGGATCA ATCTTCTGGAGGGAGGCCTGACACTGGTCCGTATGTTTGAAGGCAACAGC AGCAGCATCAGGAATCTTGCACAACAAACCGTCGAGGTCACCAACCTGCT GGCTGCAAAGTCTCCGTCTATCATTGTCTCTCTTGACTACGACATACGCC TGGGGCTCGTCTTTTGGATTGACGTCGGACTGAAGGAAATACAGCAGGTA ATTCTTGATCTGAACTGAAAACCTGTCATAGAAAGGATTTGTATGAGAAT TCTGTCCACGTTCCTAAATATAAAGGATCCTAATACAATGGGTCCATGTC CCTAAATCTAACAAATAACGGACGGCAAAATCAGCATCAACCTATTCTAA ATCAAAGGTGAACTGCAAATAGCCAACACAAAAATTGGACCTACGCAAAT TTTCGACTGATAAGCTCTAGTCAAGTAAACTAAACCGAATGAATGGAAGG AGTACCATTCCTTGACAAAGAATGGGTCTTATCAGTCGAACATTTTCAAT TGGTAAGTCCAATTTTTTTGTTGGCAATTTTTGTTTTTAACTTTGACTCA AAATAACTTCTACTCACAACACAGATTAACTTCCAAGTGAAGATTAAACG ATGTTGGCATTGGTAGACGGGTTTTTTGTAGTCCTTGTCTCTTTGAATAA TGAAATGTACATTAGATGATATTTTGCACTGCGATTTTCCACAGACATGA AACAAAAGCAACCAATATTTGGCAGATATTGATGGTAAACTTCTTCAACC CATATCCTTTTTTACTAGGTTGATGTCAAGACTGGAAAAGTAACAACGCT GATAAATGAGATTTCGACTGGTGCAGAAGTTCTCGCCACCGATTGGGTCA ATAAAAATCTCTACTACACCGACTACAACTACAACAGGGTAGTCGCGGTC TCATATAGTACAGACAACAGCAACGGGAACAGCCACATCATCACTGAAAC CGGTTTGGACAAACCGAGAGGAATCGCAGTGGACCCAACAGCAGGGTACG TTAAGTAGTTTGTTGTTCTTTTTGTTATGTTTTGTTGTGTATTTACTATA TTCGTTGTATCGATGTTACAACACAGAAATGACTTCTTCAGTGAGCTGAC TCCAAATTATATTTTGAGTACCATGTTATGTGAGGCGGAGTGATGCAAAC TGGCCGGAAGTGACTTAAGCAACAACTCATGTGCCTACTGATAGTAAGAT GGCGGTTACGTATGACAAAGTAGTGCGGATGTTATCAACGTCTATTTTTA ATATGTAACGATTTCTCTTTACTATTGATTAATTTGTGTCTTCAATATGT ATTTCTGGCACATGCAATTATGCAGAGTTAGCAAAATGGTTGTAAATTGT CACAAACACAATATAAGACTGTAAAAGTTTGATTTGGTAGGATCTATTCA GTTACATCATTTTACCTTTAACATTAAATTTGCTGTATTTGGATGCCAAA ATATATTCTGAATTTTGCACTGGCCAAAGTCCATGTTGAATGTTGACCAG TTTATCTTTTTTTAACATTTATCAATATTAGTTTTGTGTTTTGGAGTGAC TGGGGCCAGTCTCCCAAAATTGAAAGATCCACGCTGTCCGGAGAAGATCG CACGACGATCGTGGAAATTGGTCTTGGAAGACCAAGCGGTCTGGTGATTG ACTACGTCAAAAAAAGGTGAAGTCTATCTTTACGAAACACTATCTACCCC CCCCCCCACACGGTATGTATAATCTTTATTCCAAACAGCTGTAACAGAAA CTCATATGAACATTGTGATGTAGTTTTTATGTAATCAACTGGAATGTTTA TAAGTGCTTTTAAAATTGTAATAAATCTAAAGATGTGTCCTCAGAACAGA CATGCCTGCAAGGTTGGTTTCACAATAAAGATTGATTGATAGATTGAAAC TACCAGAACCCTTGGCCTTGTAGACATTGTTTTCAACGACAGATATACCA TCAGTAAATGTTTTACACTTGATAAGTTGTAATGATGCAGTATCAGATGC ACAATACTTATTACTGATTTTAACATACTAGTATTCAAAAGGCTTGTGGT TTACTCAAATATCATTAGGGATATTGCTTTCCAAGTGTTAAGGCATCGAT CGAAGATGTTACTTTAGTCATCACGTTAATCTTTTCTTGATCGGTCTAAT TGATTTTTTTTTTAGGTTGTATTTTGCCGACACCGAGCATGACATCATCG ACTCATGTGATTTTGATGGCGTCAATCGGCAAAGGTTCTACTCTCTATCG GGGACACATTTCTACGACATCACATTTGACGGTGTAAGTAAACCAGCTCA TCATCCTCGTCAAAATGGAGGTACAGTTTTTGGCCTTCCTGTTTGTTGGT TTGATGTTTTTGCGTTTTCGGATTTTTGTGGCTAGCATAACTTAGGAACC GCTGGATGGATTACGATGATATGTTGTGTCGGTTGGTCTTGGAGTTTGGT CCCCCTAGTGTGTGATTGTTTTACATAAAGAAAACGAATTAGGGCAAATG TCTTACGTTGTGAACTTGATCTGAAAGGGAGAAGATTGTCAAAGACCATA GTGGGCGTAGTTAATGTTGCAGTTCTGACATGACATTTTATCATTAAAAA TATATCATTACCGTTATCCCGGAAAAATAAATTGTTCAGCTAATTACTTA GCCTGTGTTTGCACAACCTCACAGGCGGAGGTTAATGACACCCCAGAAAC ACCCCCCATCCCACCTCCAAGGAGGCGGTATCCGTCGAGCCAAGTAATCT AGGAGCGTGATTTAGTCAGGCTAGCTAGTTACTCACAACAACAATAACAA ACATTAAAACGCAAAATGTTTAGGTTTCTTTGTAACTGGTTCTTCATCCC TGGATTGATATGTATTTTATTATCTAAGTTGGGGTGTCGCTGTGGTATAG TGGTCTGCGCCTTTGCTACTCTGCCACATCTGGTTCAAATTACTTGGACC AGAAGGACTGGGGTTCAAGCCCCAGGAAGGACACCTCTGGACAAGAGGCG CATTGAGTCATACCAAAGACTTTATAAAAATGGTACATACTTATGAAACA GTATGGAAGTTAAACACACTCCACTGCCAGTGGACTAGCCCCCTGCTGCA GTGATTGCACCACAGTGTGGCCCCAGGGCTATGAAACGGAGATGGGCACC GCCCTATACATCAATTATGGTGTGGGAGGATTTTAACTTTAAACTTTTAT GTAACTTGGGTGTTTTTTCTATGCAGGAAGAGATCATGGCCACTGACTGG TCTGACAATACCATCAACATCATCCACACCTCACGGGACATCCGAGCCTA CAGAGCCGCGTCCGTCCGGAGGGTGTTGGGAGTAGAGTTCTATGACGAGA GCAGACAACCCAGTGCACAATGTGAGTCTTATTACAAGGCATATTTGTCA TACTAACTTATGATGTTGAAAATATCATTGCAATTGCGTGTTCGCTTGTA TTTATCTTTATCTCAGGACTTCTCCAATCATAGTCGTTGCACCAGAACCA AGCGGTCCCGGGTTCGAATCCCCCTAACGCCACAGATGTTGTCCCCTTGG GAAATGCACTTTACACGACTTTCCCCACTCAACCCAGGTGTCATGGGTAT ATTGTTCTGTGTACCCTAAATAAGTTATGACAAAAAACATGAGTGCAGTG CCATGCCGTCCTTGTCCGTCAAAAAGTTGTATATCATAGCGCCTGCTTTG GTAAGTCCTCTGTTTCAAGTTCTCAGTTGGGTTAAGGCGGCCCAGGAGGT ATTATTCTGTACATATATGATTATACTCTGTAACTATCGATATCCTTGTC GCACCACGATGAAACTTGAAACAGCTTTAGAACTACTTAAAACACATTGA ATAAAGGTGACTTAAGTTTTTCTACTGCTGGATTTTGGGTTAGAAATACA CATTTTGGTTAAAAAACGTGTATTTTATGGATTTATGCGCGCAGGCGGTA ACACCACCTTTCATCATAATATTTTGCAAGGAAAGAGCTAACCCGATACA AATCATTTTTGTCCGAGGCTATTTTGTTTAAAATGACGATTAAATTGATT TTTTGGGTCAGAAACATCAGAAACAGCTATTTTGGAGTCATTTTTTATAG AAAATTCGCCCCGGTTAAAAATAGATAAAATCTATGCAAAATAGCCTCGG ACAATTTTGATAAGAAAGCGATAATAAGTTACATTTGATTACTCAAAAGC TGAAGTCTGTTGTTTTGAGCTGCGCGTAATTGCGTAAAAGTCATAACCCA AATCACACANATAAGTTACATTTGATTACCACGATGGTTCGTTGCTAAGG GAAAATTTCCACTGTAAGGGAGCGTATCAGGTTACCGGGACTCCCGCGCG GTCCCCGGGGGAGCTGTAACATCTTCTAAAATATCATGATAGTTAGACAA ACTATCTCTCGCACGTGTCTCGCCAATTGGAAATGAAATTAGCCAATGTG TATACCTAAAATCCTGCCGTTTTACTCATGTTGCATCATTTTGTCTGAAT ATTTTCTGATATAGGCCAAGTTGGCTGTTATAGACAGGATGTTCGGTGTA CAAAATATCAAAATGGTGTAAATAAGTGGGTTCTAAACGTTACTGAAAAT CCAAATCTTCTATATTCTGAACAATAACAATAATTCTAAACTTTCTGTTT TAGGAATTTTTTAATTTCTCATTCAAATTATTTTTTCGACCGAAAATAGG TCGAAAAATACATTTTTTTACACTCAAACACCCGTAAATCAAAATTTTCG CCGTATCAAAAAAATCCCTAAAACAGAAGCCTGGGGATATTAGTTCTCGA AAATTTAAGACCTCGATGAGTGAGTTTGAACGCACATTGCTCGAGTTTTT CATACCACTTTGGAACAATGTCATGCCTCACGGATAGGGGGAGGGGGTAC TTGATGCCGGCGTAAACAAGTCCTGCAACATTCAAAGTCATCAACAATGA CGCCAGTAGCTTGGCTACATGTTCCATGTCCACAACAAAATGTCAGCAAA GATATACTGTCCAGAAAATAGTTTGTATTTGTGATAAAGTGTTTTTTCTT CTTGTGCAAGGGACCGAGGACAGAAAGGGCCTTTTGGCGCGAATTTACAG TGAAAACCTGCATATGACCGTGAGTGACCCCGAATAGAACGCACGTTCTA TTCGAATACGTCACTTCGAACGTAATAGAATGTTGTTCGAATTCTAAAAA AGTCTGGAAATTTTGGTCCCATATTTGACCATCGTGTACTCAAAAGCTGA ATTCTGTTGTTTTGAGCTGCGCGTAATTGCGTAAAAGTCATAACCCAAAT CCCACACAAGCGCTCGTTGTCTCCCGCGAAATCCAACACCTGTGACGTAA CGGCCGTTCCATTCGAACACCATATCGAACATATAGAACCTCCCGTTCTA TTTGGAACACCTCTGTCAAAACAGCGCTAGTAGGACTCGGCGCGGCCCAT GCAACATTTGTGGAGGACACAACTTCCAAATCATTTGATTGAAACATTTA GAATGTAATACAATCCAAATCCTGGCCTATAAAACAAATTTGTACTTGTA CGTACACCTGAGATGATATATATGATTGTGTTGTGTAATAGACCTTGCGC TCCCCGATATGCTCCGTAGTGGAACATTTCGAAACGTGTTCGGGTTCGGC CGAGCCGCTGGCCAGGCACGCGGCCGAACTCGAACACGAATTTTCGAGCC TGGGCTGCCTTAACCCAACAGAGTTATAGAATATGCAATTACTACACTAC AAAATAAAGCAAAAAAATTGAATAGCAACTGACAATTCTAACAGCAATTT GTGAATGAGCAGATTTAAATGTATTTTTCATTATGTATCATTTACATTAA TGTTAACCCTCAAACCACCGTATGGGGTCAAAACTGACCCCAGGCGTATA TCAACATGTGCCATTTTGACATTTCGATGCGAAAACAAAATTCCTTCCAT GAGTTTGTTTGTATATATGTCCTATAACATCTCACAAGTTTTTACCGAGA TTGGCTCATTGTTGATTAATTTATCCTAGAAAGTTTACGCATGGTTCAGT GGGGTCAAAACTGACCCCAGCAAAATCTGCACTCATATTCCCTATTGTTT GATACTTGTCATCTAGTAACATGTATGATAAGGGTTATTATGATCATAGT TACAAAATATAATTTTGTAGAAACGTGAAAAAAGCAAATTTTATAAATGA ACGTAAAAGATTAATGACGTTACGGCGTATTATGACGTCATTTATGTGAT TTTATTGACGAAAACCAACAACTTGGGTATTTCCATATAATTCAAAGGTA CACGATAAAAGTTAAATAGAAATTATGTATGATGAATCATAATATATTCA AAGACATTATTTGTTGATGACAACAGGAACGACGTCAAAATGACGTCATA AAAATTATATTCATATCAAGTTACAGTAGCGAAATCCGCCATCTTGGTCC CGCCATCTTGAATTATTTTGAATGCATTTTTTCATCATATAACCTAATAA CACAATAAAAATGGACCAAAACGTTTATATTAAGATTGTATCTGTTTCAA TAAACATGCTAATGATGAAATTTGAGGTTTAAATAACCGGTTATAGCTAA TCTAATTATATCGTCCGCCATCTTAGATTTTGACCGATGACATATCAAAA TATGCATAAATTATGAATATTGAATCATGAAAGTGATAGTGAATTAAATT GGTTGGCATTGATGTAAGAAAATATGTGCAGTTTGAAAAGGCAGCCCTAG AATACATTGTAAAATCCAAAATTAGCGACTTATTCCAAATATGGCTCTAA GAAACCGGTTGCCATAGCAACATGAAAACATTGATTAGATACTTCATTAA ATCAAAATTGTTGCCAACGAAATTTTAGCTAAGGTGACCAAGTTTGGTTG TTCTAGCGTAAGACATTCTGATGCTATATGACATCAAGTGTTGGCGCAGG CCTCAAAAGAGCCCGCTCGTCTGAATAGCGTTAGTTGCAAAAGGCGATGT TCCTATTTTTGCATAAATTATGATAATGAGCAGAAATTATTCACACCTAA TCATGTCAAACTATCCCTTATAGATTACTTTAACTATACATATATACAAA CCACAAAAATAGTAACCAATAAAGCAATATTTGTAGAAAACATTGTGGGG TCAGTTTTGACCCCATACGGTAAGATTAGTCGTAAAAAAGCTACGGTGGT TTGAGGGCTAACCTTCGTTGACAAGTAACGCTTTGAAAACATTTAGCAAG TAAGATTTCACAATCTTTTACTTGCTTGCCTTACCAGAAATGGAAATGTG ACAGCAAAACATTGTTTCCTTCTTTTTTAAATCCAGCCGACTGCAAGTTG AACAATGGCGGCTGTCAGCAAACCTGTGTTGGGGATCGAAGTGGACACAA GTGTTTGTGTCTACCTGACTACAACCTGGCTGAAAACATGAAGTCCTGTG TGAGAAGTATGTACTTTTTGTGACAAGAGAAACTTGTGTTAGTGCCATGA CATAAAATGAAAGATATCAGGGCACCCGTGTACCCGTTCAAACGAATTCA TCATAATGCTGCAAATGTATTACCTCGATATACAAAATGCATCTCCCTTG GCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTG GCTTGGCCTCGCGAGCGAGCGAGCGAAGATTTAAGGGTTTTGTCCATGTC TTCAGGAACTATATGGCAGAACGTTCTTTTCTCATCATGAATAATACTGG CGATGTTCCATACGTATACCGCTAGAAAATGCCATAGTTCTTGACATTAT TGAATGTAGAATGCTAGGTCTTGTTAATGCAAAAATGTCAACGGTATATG TAAACTATGTACACATGTTCTGTGCACGAGGATATCGATATTGGGAAACA CCATTTATCCAAATCACAGTTCTGTGTGACATTATGATCATACCGGTTGC AAACATATTTTGCTGAATTTCTGTAAAACACAATACTCCCCAGATGACCA CCTCTTCACCAAGGCTCTACTTGTGTCCACGGATGAGGGCATACTGCAGT TCCAGCACAATCTGGTCGACCTGCCTCAAACTGCAGACTCAAAACCAGCT GTCTTAGTGAGTGGAGGGAAGACTGTTGCTATGGACTTCAATTACAACGG TGGGTATACATGCGTGTGGGGTTTTGGTATATTTTTTTTACTGCAGCATA CACATCAGCATGCCATTCTTTAAGTAATGAGGCTGTTGTAGTCAGTGTCT TCTAACGTACTCGAGGCACCTCCTTGAACATCTAAGTATGATGTGATGAC ATGCAGGATAGATAAGAAATATGAGATGTAATTCATCAATTTTAATACGA GCACAAATGCATTTTACATCGTTAGAGAAAGCTGTGTACTACGTACAAGA AGTAGACGGTCAAATGAACAGCATCCAGAAGTTGGAATTGACGAGCAGTC AGTCATCTACGATCTACTCAGAAGGACAGGGAATAGCAGGTTTGTACTTG CGACTTCTTAAGAAATGATGGTCTAGATAGTAGCGTCTTAAAGCAGATTT CTTTGTGAGTTATGATGCTTATTTTGATTAGAAAAAAAATTATGTATTTA CTTTTCTCATAGAACAGTATAATAACAAGCTATCTGCCACTAAAATCATG GCCATAGCAAGTCCAGAATACGAGATATCAAAACCGGAAGTTTCGCTGCA GTACCATAGCAAGCTGCTATGGTGCCCAAAATCTAATCACTTCGATTCAG AAGTCCTACTGACATATCAATTATAAGGACAATCCGTCCAGACATTCTTA AGTTATAGTTTTCACACAATCCGTCGGGGCATTCTTAAGTTATAGTTTTC ACACAATCCGTCGGGGCATTCTTAAGTTAAAGTTTTCACACAAAGACACA CATAAAGCACACACACTGCGGGAAAATAACCTTCTAGGTCAAGGTAATAA TGGTTTACAGTATAGTATGTGCATCAATAAGAAAAAAAAGACTTGCTCTT TTTTATCTACAACATATTTCATTGTTATACTTATGATTTTACTATGTTGT AGTCTCGGCCACATTGAAAATCAATTTGTCAAAATTGAATGGGCTACACA GCCGTCTAAAAATTCAATAGATACATAAATGAATATCATATGATTACAGG GATAGCTGTTGACTGGGTTACGTCTAACGTGTACTGGACGGACGGAGGAA CAGGCGGGATGATCTCTGTCGCTCGTCTGGATGGAAGCTCCAGGAAAATA TTGATGTCATATCGTAATGACCCAAGAGGAATAGCTGTACATCCAGTACA GAAGTAAATATTAATTGTTTTCAATGACATTTCATTCATCACTACTGATA TATACCTAAGTGTGTATGCATGTATGTAATGTATAGATGTAGTAGACCTT ACGAAAGTCGCTGTACTTTCGTTGTGCCAATAAAGATTGTATTGTATAAA ATATAAAACACCCAAACGTTGACGTTTCTACTAACCACAAGTAAAATTTC GAACGAAATAGTATAGTACGTGCTTCAGCTCGTGTTATAATTCTTAGATA ACATTTTCATGGATAGCATTGAGAGAAATAGGTATTATTTCAAAAACAAT TTAACGACAGAGAAGCTAGCTATAATAACTATATAGAGGTTTTAGAAAAT GCTGTTGTTTTCAGGTTGCTGTATTGGACGGAAGTCGGTGGTGGTTCTCC TAGTATTTCACGTTCTACTCTCGCTGGAACTGAACAAGAAAAAATCATTT CGCCTGATCTTGGGACATCTATAAGGAAACCGACTGCTCTCTCCATCGAC TTCCTCAATAGCAGGTAGGTGTGACCTAAGCTGTCATCTTGCATGATTCT TGAATACATGACTTCAAGGTTGTGAAAAATGTATGATTTTGTATTAGAAA TTCTGTATTGTAGCCTCCACAATGCCTTTCTATTGGGGTACGGATCATAG AATTCGGCAAAAAGGGAAAAGTTAGTCAGAAGAGTGAGTCAACGGTAAGG TTAACATTTCATCTTCGCATGCGGAACGCAACCGGTCAAGCCCTTTGGTA CCCAAGCTTCCCAGGAGACTTATTCTCTCTTCAGCCAGTGTAGTCAGTCT GGTAGAGACTAAAGCCCCCCTCTCACTGGACCCGTGGCACGCTGGCGGCG TCGCTGCTGCCGATCGAATTGACAAAGCACTCAACGAATTTCATCCATAA AAACGAATATTTTTAAGCTTTATGTGTTTTGTTGTCTTTTTGGTCATACT TGTAGGTTTTGAATAGCCCCCCTCTCACTGAACCCGGTGCACGCTGGCGG CGTCGCTGCGGCCGATCGAATTGACAAAGCACTCAACGAATTTCATCCAT AAAAACGAATATTTTTAAGCTTTATGTGTTTTGTTGTCTTTTTGGTCATA CTTGTAGGTTTTGAATAGCTTTCCAATTATAAAGTCAAGGGTAACACAGT TCAAGTTTAGGACGCAGTGCCGCCGCCAGCGTGCCGCGGGTCCGATGAGA GGGGGGCTTATCTGTATTGTAGTATTGCTCTTCATCTAGCCGTTTCTCCA ATGCAGGTTATACTGGGCTGATAGTGAGGCCGGGACCGTGATGTCATCAG ACCTTCGCGGTAAGGATCCCCAACAACACTGGACAAGCAACGGTGGAGAA CTCTTCGGAATAGCCGTCTACAAGGTAATCTTTCTATCAATACATGAACT ACAGACTGAATAATAGCGTTTATAAATGTAGGGGCAGATTCAAGCGATTT AAGGAATCTACAGATACGTTTTAAATTATAGAAAGCATTTCCAGCCAGTA TTGCTTCTGTCCCTTTAACGATCCGGGGTCCGGCTGGGCAGCGTGTGGAA ATGAAAAATATCAATTTAATGACAACAAAAGATACAAAACGTAAAAAAAA TATTCCTAACCATATATATATATATATATATATATATATATATATATATA TATATTGCGCATTTTCCTTATATGCATTTTTTATTTTTCCGTTTTCGCAA ACAGCCCGGCCGAGGATTGGAAATGGGACTACAGCATAAGTCGAATTACG AATGTATGCCAGTGAGGAACAGAACTATGTCATAGTCACAAATTGTTTGA AACATGTACATTAGCCTCTTGTTTATTGTTTTGCAACAAGGAATTTAATT TCTGGACGGACCGTACAAACCAGACCGTCAGTATCGGGTTGAGGAGCACG TTGGAAAGGACGGTCCAGCTTCAGACAACACCGCACAGTGTCCGCGTCTT TGACGGCAGTGAACAGCCCCTCTCAAGAGGTACTAATCTCTCTCACAGTG TAAAAATCTAGGGTTTCCTCTAGCTCAAACATTTCCTATTAAATAACCAG TTATAATGTTCTGTAGCAACTTTGTAGCATCTTTCCATTGACTGTTAAAC TATGGAACTTTCTTGGTGACGACTATTTCCATTCCGTATGCAGCCTGCAA AGCCTTCAAAACTAGTGTTTAACGCTATCTCTCAGCATAGTCATCTTCCT CTTCCATCATTTTGGTCCAATGCCTAGAAGTGGTCACATATAATGTTGCA TTGAACATAACCGTTAAAAAGATGGCTACTCGTGGTTATCATTTATTTCT GAAGTTCCAGGATGTTGTGCAGACTTATGCTACGGTCATATTTCCAATCC GGGGCCCGGTCGGGCAGCTTGTGGGAATGAAAATATGATACACAAGACAG CAAAAGACACAATATGAAAAAGAAGACTCCCAATAATATCGTGTGTATTT CTTGATATGCATTTTGTTTCCGTTTTCGCAAACAGTCCGGTCAGGCCCCG ATTAGAAATGGGACCGTAGCATGAATAATACTTCCTCCCATAGTAAATTG CTTTCGATTCCTTGCCTGTTCCGTGTTCCTATAAATGTTTCGACTATTGT CAGCATTATCCTCTTTTCTCTTAGCAATACCGGAACTTTTTTATTTAAGA TTAAAATATTGGATGTTCTTTCAGGTCCATGTGATCTTCAAAATGGCGGC TGTAACGAGCTGTGCCTACCAACAACTGCAGACCGCAAAATCTGCGCCTG CGCGGGGGGTAATATGCTGCAGCCGGACGGGATAACCTGTATTAACCCTG CGGATGTGAA

Coding sequence (CDS) from alignment at Sc0000036:783163..798522+

>transcript:BL96291_cuf9 ID=transcript:BL96291_cuf9|Name=transcript:BL96291_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=2463bp|location=Sequence derived from alignment at Sc0000036:783163..798522+ (Branchiostoma lanceolatum)
ATGTACTGGACGGATTCAGCCTATTGGAAACCGAGAATTGAGCGGGCTGC
TATGGACGGCAGTGAAAGGACCATTCTAATCAGTAGCGGTCTGGACACCC
CTATTGGAATTGCCATAGACCTTAATGAACGCCGTCTGTACTGGAGTGAT
GCTTCGGCGAGCAACGTTCAGAGCTCCGACATGTTTGGAAACAATCGGCG
AACCCTGGTCTTCCGTTCCTCAACAAGTTTCTTCGATCTCAGCCTGCACG
TCAATGACCTGTTTTGGACTAGCCGGTCCGAGTTCATAGGAATAAATGCA
AAATCACAAGAGGGCCAGGTATCAAACCGAGTTCTTGCCGACGGCTTCTC
GAGTGCAAGGGGAATAGCCGTGTACGGGGCCGGCTTACAGGCCGACGTTA
CAAACGCTTGCTCAGAGTCGAAAGGCGGTTGTCAGGATTTGTGTCTAGCT
CGACCAGGAGGAAGAACTTGCGTCTGTAGGGCATATTTCGTTCTCCAGAG
CGACAACACCACGTGTGCTCCTTCAGAAATAAAGGCTCCGAGCTACCTCT
GGATCAATCTTCTGGAGGGAGGCCTGACACTGGTCCGTATGTTTGAAGGC
AACAGCAGCAGCATCAGGAATCTTGCACAACAAACCGTCGAGGTCACCAA
CCTGCTGGCTGCAAAGTCTCCGTCTATCATTGTCTCTCTTGACTACGACA
TACGCCTGGGGCTCGTCTTTTGGATTGACGTCGGACTGAAGGAAATACAG
CAGGTTGATGTCAAGACTGGAAAAGTAACAACGCTGATAAATGAGATTTC
GACTGGTGCAGAAGTTCTCGCCACCGATTGGGTCAATAAAAATCTCTACT
ACACCGACTACAACTACAACAGGGTAGTCGCGGTCTCATATAGTACAGAC
AACAGCAACGGGAACAGCCACATCATCACTGAAACCGGTTTGGACAAACC
GAGAGGAATCGCAGTGGACCCAACAGCAGGTTTTGTGTTTTGGAGTGACT
GGGGCCAGTCTCCCAAAATTGAAAGATCCACGCTGTCCGGAGAAGATCGC
ACGACGATCGTGGAAATTGGTCTTGGAAGACCAAGCGGTCTGGTGATTGA
CTACGTCAAAAAAAGGTTGTATTTTGCCGACACCGAGCATGACATCATCG
ACTCATGTGATTTTGATGGCGTCAATCGGCAAAGGTTCTACTCTCTATCG
GGGACACATTTCTACGACATCACATTTGACGGTGAAGAGATCATGGCCAC
TGACTGGTCTGACAATACCATCAACATCATCCACACCTCACGGGACATCC
GAGCCTACAGAGCCGCGTCCGTCCGGAGGGTGTTGGGAGTAGAGTTCTAT
GACGAGAGCAGACAACCCAGTGCACAATCCGACTGCAAGTTGAACAATGG
CGGCTGTCAGCAAACCTGTGTTGGGGATCGAAGTGGACACAAGTGTTTGT
GTCTACCTGACTACAACCTGGCTGAAAACATGAAGTCCTGTGTGAGAAAT
GACCACCTCTTCACCAAGGCTCTACTTGTGTCCACGGATGAGGGCATACT
GCAGTTCCAGCACAATCTGGTCGACCTGCCTCAAACTGCAGACTCAAAAC
CAGCTGTCTTAGTGAGTGGAGGGAAGACTGTTGCTATGGACTTCAATTAC
AACGAGAAAGCTGTGTACTACGTACAAGAAGTAGACGGTCAAATGAACAG
CATCCAGAAGTTGGAATTGACGAGCAGTCAGTCATCTACGATCTACTCAG
AAGGACAGGGAATAGCAGGGATAGCTGTTGACTGGGTTACGTCTAACGTG
TACTGGACGGACGGAGGAACAGGCGGGATGATCTCTGTCGCTCGTCTGGA
TGGAAGCTCCAGGAAAATATTGATGTCATATCGTAATGACCCAAGAGGAA
TAGCTGTACATCCAGTACAGAAGTTGCTGTATTGGACGGAAGTCGGTGGT
GGTTCTCCTAGTATTTCACGTTCTACTCTCGCTGGAACTGAACAAGAAAA
AATCATTTCGCCTGATCTTGGGACATCTATAAGGAAACCGACTGCTCTCT
CCATCGACTTCCTCAATAGCAGGTTATACTGGGCTGATAGTGAGGCCGGG
ACCGTGATGTCATCAGACCTTCGCGGTAAGGATCCCCAACAACACTGGAC
AAGCAACGGTGGAGAACTCTTCGGAATAGCCGTCTACAAGGAATTTAATT
TCTGGACGGACCGTACAAACCAGACCGTCAGTATCGGGTTGAGGAGCACG
TTGGAAAGGACGGTCCAGCTTCAGACAACACCGCACAGTGTCCGCGTCTT
TGACGGCAGTGAACAGCCCCTCTCAAGAGGTCCATGTGATCTTCAAAATG
GCGGCTGTAACGAGCTGTGCCTACCAACAACTGCAGACCGCAAAATCTGC
GCCTGCGCGGGGGGTAATATGCTGCAGCCGGACGGGATAACCTGTATTAA
CCCTGCGGATGTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96291gene:BL96291Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96291_cuf9transcript:BL96291_cuf9-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96291_cuf9-E1BL96291_cuf9-E1-1564476830-191652Branchiostoma lanceolatumexon
BL96291_cuf9-E2BL96291_cuf9-E2-1564476830-191654Branchiostoma lanceolatumexon
BL96291_cuf9-E3BL96291_cuf9-E3-1564476830-191656Branchiostoma lanceolatumexon
BL96291_cuf9-E4BL96291_cuf9-E4-1564476830-191658Branchiostoma lanceolatumexon
BL96291_cuf9-E5BL96291_cuf9-E5-1564476830-191660Branchiostoma lanceolatumexon
BL96291_cuf9-E6BL96291_cuf9-E6-1564476830-191662Branchiostoma lanceolatumexon
BL96291_cuf9-E7BL96291_cuf9-E7-1564476830-191664Branchiostoma lanceolatumexon
BL96291_cuf9-E8BL96291_cuf9-E8-1564476830-191666Branchiostoma lanceolatumexon
BL96291_cuf9-E9BL96291_cuf9-E9-1564476830-191668Branchiostoma lanceolatumexon
BL96291_cuf9-E10BL96291_cuf9-E10-1564476830-191670Branchiostoma lanceolatumexon
BL96291_cuf9-E11BL96291_cuf9-E11-1564476830-191672Branchiostoma lanceolatumexon
BL96291_cuf9-E12BL96291_cuf9-E12-1564476830-191674Branchiostoma lanceolatumexon
BL96291_cuf9-E13BL96291_cuf9-E13-1564476830-191676Branchiostoma lanceolatumexon
BL96291_cuf9-E14BL96291_cuf9-E14-1564476830-191678Branchiostoma lanceolatumexon
BL96291_cuf9-E15BL96291_cuf9-E15-1564476830-191680Branchiostoma lanceolatumexon
BL96291_cuf9-E16BL96291_cuf9-E16-1564476830-191682Branchiostoma lanceolatumexon
BL96291_cuf9-E17BL96291_cuf9-E17-1564476830-191685Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000036genomeSc0000036:783163..798522 +
Properties
Property NameValue
Transcript idBL96291_cuf9
Biotypeprotein_coding