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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96391_cuf70 >transcript:BL96391_cuf70-protein ID=transcript:BL96391_cuf70-protein|Name=transcript:BL96391_cuf70|organism=Branchiostoma lanceolatum|type=polypeptide|length=502bp
DAGQSEASENSGIIEVKEIIIPADVEPDASLWRTQIVRASTGLRLFVPIK
GKPTPEITWTKGEENLEERANITNTDTASLFVLPNMQRLDAGKYCITAEN
KAGKKSSFINVKVLGPPGPPGPIKVKDISKDSCIIQWSAPDDDGGSDVFN
YIVEKKEAGRVGWATVTFKQQKNTYRITNLVETCTYYFRVIGENKYGIGE
PVETEEPICALDPVEPPEKPKNLTVEEVTPATVSLAWKRPDWDGGSRISG
YLVEYLAPGEEEWTKAATARNVSYTVFGLDRDATYRFRVTTLTELSQSVP
AELPEPITCKEEQLAPTLDLSSIKGDTLIVKGGTDLTLTIPVRGAPDPTV
AWMHGLQQIQEKGRYFTKKTREFTRLQIKKTKKEDGGKFTITATNVVGST
SAVFNLKVLDKPGPPYGPITFDDVTDESVMLGWEPPKDDGGSEVTHYVVE
KSDVRTAQWQYVSSEVRRTHLKVTGLNKGAQYQFRVSAENRFGVGTPLNS
SS Run BLAST on NCBI mRNA from alignment at Sc0000008:5573553..5579804+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96391_cuf70 ID=transcript:BL96391_cuf70|Name=transcript:BL96391_cuf70|organism=Branchiostoma lanceolatum|type=mRNA|length=6252bp|location=Sequence derived from alignment at Sc0000008:5573553..5579804+ (Branchiostoma lanceolatum)
GATGCTGGCCAGAGCGAGGCTAGCGAGAACTCTGGCATCATCGAGGTCAA
GGAGATCATCAGTAAGTTCCCATTTCTTTAGGGGTTGGCGGAAAGACCCG
TCCGGACCAGACGGCGAAAAACTCAGTCCGGTCCGATTAGTTTAATTAGA
ATTGCAAGTAGTTCTGACGTTGATGTGTTTCCCAACATGAAGCGCACTGA
TTGGATAAATAGGGGTGTGCATGCAAATCTCTTTTCTGTAGTTCATGTTA
AAGAATTTCTTTGCACATGCAAGAATTATGCCTGTGTAAGCCATATATTT
CTCAGAGTACAAGCGGTGTTGCTCTTATTATACTGGATCATTTCCGTCAC
AACATCTCAAGATGTCACATATTTTCCTCTGGGACTAAATGTTGCTTATG
TGCAGTCCCTACAGATAGTGAGTCTGATATTGGCAATGATAATTGACGAC
CCTTCTTTCTCATGATCGCCACTTTCAAAAGAATTATCATGATTTTTTCT
ATGTCCAATCCTAACTGCTGTTGAGGCTTGAGTGCAGTCCCTGCTAGGTC
CCTGCAGACATTGAGCTTGAAACACTTCTTTCTCACTGCTGTCATGACAC
ATTTTTTTCTATGTCCGATCCTAACTGCTGTTGTTTCTTGTGTGCAGTCC
CTGCAGATGTCGAGCCCGACGCGAGCTTGTGGCGTACACAGATCGTGCGC
GCCAGCACCGGTCTGCGCCTGTTCGTCCCCATCAAGGGCAAGCCTACACC
CGAAATCACATGGACAAAGGTAGGTGGCGCTTTTCCACACATTGCTAGAT
TACTACACATCTTGTTGCTTGTCTCTCATGCTACAACTAGACATCTTTGA
TAACCTGGGCTGCAACATGTTAACTATGTAGCTCTTGTATCTAGATACAT
GTATCTTTTACAAGCTGATCATGATTTGCGTTATTTTCAAGTATGAGACT
CTTACCCTTATTCCTACTGACTAACCAATGAGCAATGCAAATATGGTGCA
AAACAGCTACCTTAGATGGCTGAAGGTTAAGGTATATTTGAATTAGACTT
GGTAGATATAATGATAATCAATCAATCAATCAATCAATTAACCGTTGGTA
AAAACTCAAAAACATGCAAACTGTGGGCTATTGCTAAACTAAATGATGAT
CACCTATTAGTTCCTTCTCTCTTTCTGAAACATTTGGAGATATCACTACA
TACTTTGTCCATTATATGTTCGTTCTTACATGACATTAGGTATATAAAAG
TGTCCTGTTTTGACATATTTGTACATTTCTTGTCTAATTCTATTATCTTA
AACAACGATTGCCGCTCATCTTTATATAAGGAACAATCAAGTAAAAAGTG
GATTTCATTTTCAACATGTAAACATATGTTGTAACATCCATCTGTGTTTG
TTCAGGGTGAGGAGAATCTTGAGGAGCGCGCGAACATCACGAACACGGAC
ACGGCGTCTCTGTTCGTGCTGCCGAACATGCAGCGCCTGGACGCCGGGAA
GTACTGCATCACGGCCGAGAACAAGGCCGGCAAGAAGTCCTCATTCATCA
ACGTCAAGGTGCTAGGTGGGTGACAAGGAGAAAAATCTTTGATATCTAGT
TTTATTGGTTGGAAAAAAAAAGACTGAAATATGAAAAATTGATCTTTTTG
ATTTCCCTTCACTGGAAGAAAATAATAAGAATGATATATAAAAAATGTCT
GTAGATAATAAAACAAAATGCAAGATGACTGGAAAAATAGCATTTAAAAT
CCATTCATCAACGTCAAGGTGCTAGGTGGGTGACAAGGAACAAAAAATTC
TAATTTTTTATCAAATCAAATTTCACAAATTAGAATGCAGTACAGAAAAC
AGAAAGTGAATGAATGTGAAGACTGTCATCTGTACAAATCTCTCTATTGA
CACACCCCTACGTAGAAAGTGGGTACGACCCCTTAGGTCAAAAGTCATAT
TTATACTCTAGTTTTACATTTAAATAGGGAAGGATATAGAGAGCATTCTA
GCTTGTAGCTAGGAATTCTACGGATTGAAATCCCTTGGTCTGAATGTTTG
GAACAGTCTAGTAAGGTTTGGCGTTTGATGTTTACTGCGTTTTTCACATT
TTTATCTTCTGAATCAACCTTTATTTTTACATCTAAAAGGGGATACGCCC
ACTCGATGGTTTGAGCGCTTAACCCCCCCTCCCCTCTAACTTGGTACGGT
TGTATTTACTGAGTTTCTCACCTGAGTTTCTTTACCTCTAGGTCCACCTG
GACCACCTGGACCCATCAAGGTCAAGGACATCTCTAAGGACTCTTGCATC
ATCCAGTGGTCTGCTCCAGACGACGACGGAGGCTCAGACGTCTTCAACTA
CATCGTAGAGAAGAAGGAGGTCGGTATTGTTTCTTACATATAACTTGCCC
TTCATTTGACCTTCATAGTAAACTTTGCCCTTCATTTGACCTTCATAGTA
AACTTAATCAATAATGAACTTTGAGACTTTGACGTTGGAACGGTTTAGAG
TTAAAGTTTATTCGGGTATCCTTAACTGTAAACATCAATTCAGCAACGGA
AATGTAGAAAAATAGTTTAACCTGTTTATTCCCTCCGCCCCCCTCACCTC
AGGCCGGCCGTGTTGGCTGGGCCACCGTGACCTTCAAGCAGCAGAAGAAC
ACCTACCGCATCACCAACCTGGTGGAGACATGCACCTATTACTTCCGGGT
CATAGGTGAGAACAAGTACGGCATCGGCGAACCCGTGGAGACGGAGGAGC
CCATCTGTGCCCTGGATCCTGTCGAGCCGCCAGAGAAGCCCAAGAACCTT
ACCGTGGAGGAGGTTACCCCGGCAACCGTCTCCCTGGCCTGGAAGAGACC
AGACTGGGACGGAGGCAGCCGCATCAGCGGGTACCTGGTGGAATACCTCG
GTAAGGGGAGACTCGATTGGTCATTTCGGATGTTAGAAACTTAATATTTT
CTTTTTTTCTTTGCATATTTCTTCGCTCCTGGTTAAAATTGCTCTAGATT
CAAAGATGAAAGAACAAAGAATAGAAGCTATCATAAATCTTTATGACCAA
CAAAGTCAACTTTTTGATGTCTGTATATCTGTTATGGTCAGTCAGACAGA
GTCTATATCTAATTATTTACCCTGTTCTTCAGTGTTTTACAATCATGTAC
ATTTCCGAAATTCCGAGCAATGACGACAACTTTCTGAAGTTTGTATCTTG
GCTTGTCTCCACTTCAGTCCCCATTTAGGAGTAGTGGACCAAGGCATGGT
GTTTAGAACTGATACATTTTGACATTGAAGAATGTACGTGTTGTATATTG
TATCTTAATGAGCAATAAGGACAGCTTACTGACGTGTCTGGACACTGGAC
TCTGAGGGTCTGCATTGATATCCGCCATGAAGGACAGATTGTACTGGAAA
AACTGTATTGATTGTATCTCACCGGAGTAAATCCGGAAGAATGATGATGA
TGATGATGATGACTGACGTGTCTATCTCTGCATCCTACCTCAGCTCCCGG
TGAGGAGGAGTGGACCAAGGCGGCCACGGCCAGGAACGTGAGCTACACGG
TGTTCGGGCTGGACCGCGACGCGACCTACCGCTTCCGGGTCACGACCCTG
ACGGAGCTGTCGCAGAGCGTGCCCGCCGAGCTGCCGGAGCCAATCACGTG
CAAGGAGGAGCAACGTAAGTACAACTGCCTTTTTTTGCATTTCGGTTTCA
TTTAAAGAACTTCGCATTTTGGTTTCATTGCAACAACTCTGCATTTCGGT
TTCATTATTTTGAATAGGGCTACTTAACTGTTTGAAAATCCAATAGATTA
ATAAATGGTTAAGCTTACCTTGCTCTGCTTATTACTATCGTGTTTCGGTT
GTGATTAGTACCACTTGAATACTGATGTTCCTAGAAAACGAAATAAAATT
TGTTTTGTTCTATGACTATCAAATTATAGACTGTAACTGCAAGTCATTTT
ACCTAGCTAGCCAGTTGCAGTTAGTGATACTAATGTATCCGCGAATAATT
TCATCAGGTTGGCGAATTCGATAATAATGTAGTTGTCTTTTCTGTGCCCA
ATCAGTGTCTAAGTGACAAAGGGGTATAGCATTCCTAAGATCCCTTACAT
TTTGTGCTTTGCCAAAGATCGTGATTGACAGGAACACTCCCCCCCCTCCA
GTTGCTCCGACCCTTGACCTGAGCAGCATTAAGGGCGACACGCTGATCGT
GAAGGGCGGTACGGACCTGACCCTCACCATCCCGGTCCGCGGCGCGCCCG
ACCCCACCGTCGCCTGGATGCACGGTCTGCAGCAGATCCAGGAGAAGGGC
CGCTACTTCACCAAGAAGACGCGAGAGTTCACAAGACTCCAGATCAAGAA
GACGAAGAAGGAAGACGGCGGGAAGTTCACGATTACGGCTACGAACGTGG
TCGGAAGCACCTCCGCTGTCTTCAACCTCAAAGTACTAGGTGGGTGACGA
TACATTTCTCAGTTTTGAAATGTGTATCTTTGTACATGAACCTTACCAGG
GAAAGATGAAGATAACAACACCACTAAGGTGACAAACATCCCCTTATGAA
TTTTACTGTTAGCTGTTTTTGGTTCTGTATCTGTCTGTATCTATATAGCC
GGTATAACCGCCATCAGGCGTAACACACCAGCTTCGCAGGCACGCGGCGC
GGCAGCAGCTGGTCATATTACACCGAACGGTCTGTTACACCTAGTCTTTG
CATATCTGACTGCAACCGTTCTTTAAAGCTACTTAGTGATGAAGCTCCTA
CAGTACTTGATGACAACGAGTTCCATTCTACTATGGTTCTCGGGAAATAC
GAATTTTTGAACACGTCAATCCTTGGCTGATAACTCTGGTACTTAAAAGC
ATGACTATTTCTGGTCCTCTTCTGAGCTGGCATTAGATACTTATCAGTCG
GTACGTCCACAAGTTTATTAGTCATCTTGTACATCATGCAAAGTCTGGAC
ATTGTTCTCCTGTCCTCAAGTGACATCCATTGCAGGTCTGCTTTCATTTT
TGTTACACTGGCGCCCCTTTCATAGTTGTTCGTGCAGAATCTGGCAGCTT
GGTTCTGCACCCTCTCGAGTTTATCTATATCCTTCTTTGTGTATGGATCC
CAAACTGTTGCAGCATATTCAAGGTTTGGTCTTACTAGAGACGTGTATGC
AAGTGATTTTACCTTTGCTGGGCATGCCCACAAATTACGTTTGATCACTC
CCAATGTCTGTTTAGCCTTAGTTGTTACTTTGTTGATATGGGTGTTCCAC
TTTAGCCCCGTTGTTAATGTAACGCCTAGGTACGGGTGGCTCTTTGCTGT
TGCTAGAGCCTGTCCACAGAACTGGTAGGTGGTTACAATTGGGTTTCGTT
TGTTTGTTATATGCATGATGTAACATTTTTCCGGATTAAACTGCATTAGC
CATCTGCTTTGCCATTCTTCGAGTGTGTTCAAATCTTCTTGCAAAAGCTG
TGAATCACTCTGTGTGGACAACTCTATATATAACAGGCAGTCATCGGCAA
ATAACCTAACATTTGAATCAAGCTGGTCTGGTAAGTCATTAATGTACAGG
AGGAAGAGTAACGGTCCCAGAACAGTTCCCTGTGGTACGCCTGACGCAAC
TCTAACTGGAGCTGAGGCCTTGCCTTCTACCACTACCGTCTGTTCCCTAT
TGGTCAAGAAAGCCTTCAACCAATTTAGTGTGGTGCCTTGAATTCCGTAG
TGCTCTAGTTTAGTGATGAGTCTGCTCTGGTTGTATGGTTCTGGATTGGG
ACATTTTATCCTGGTTGAACTTTCAAGTAGCCGTGTAGATGCTGCGTAAT
TTACCACTTTCTGAACCTCATTCAATCAAAAGTAATTGTTGCATTTTCTT
GTACCGACATTATAGTCTGATCATCGACACTGTCACATAATTCTCCAGGA
TCGAATTCCCCCGAATTCTCTTGACATTAGTGATAATGATATAATAATCA
TACTTTAATGATGTATCCACAGACAAACCTGGCCCCCCGTACGGCCCCAT
CACCTTTGACGACGTCACTGACGAGTCGGTGATGCTTGGCTGGGAACCGC
CGAAGGACGACGGCGGCAGCGAGGTGACGCACTACGTGGTGGAGAAGAGT
GACGTGCGTACGGCGCAGTGGCAGTACGTCAGCTCCGAGGTCCGCCGCAC
GCACCTGAAGGTCACCGGGCTGAACAAGGGCGCGCAGTATCAGTTCCGCG
TCAGCGCAGAGAACCGCTTCGGCGTCGGAACGCCGCTCAACTCCAGCAGC
TG Coding sequence (CDS) from alignment at Sc0000008:5573553..5579804+ >transcript:BL96391_cuf70 ID=transcript:BL96391_cuf70|Name=transcript:BL96391_cuf70|organism=Branchiostoma lanceolatum|type=CDS|length=1506bp|location=Sequence derived from alignment at Sc0000008:5573553..5579804+ (Branchiostoma lanceolatum)
GATGCTGGCCAGAGCGAGGCTAGCGAGAACTCTGGCATCATCGAGGTCAA
GGAGATCATCATCCCTGCAGATGTCGAGCCCGACGCGAGCTTGTGGCGTA
CACAGATCGTGCGCGCCAGCACCGGTCTGCGCCTGTTCGTCCCCATCAAG
GGCAAGCCTACACCCGAAATCACATGGACAAAGGGTGAGGAGAATCTTGA
GGAGCGCGCGAACATCACGAACACGGACACGGCGTCTCTGTTCGTGCTGC
CGAACATGCAGCGCCTGGACGCCGGGAAGTACTGCATCACGGCCGAGAAC
AAGGCCGGCAAGAAGTCCTCATTCATCAACGTCAAGGTGCTAGGTCCACC
TGGACCACCTGGACCCATCAAGGTCAAGGACATCTCTAAGGACTCTTGCA
TCATCCAGTGGTCTGCTCCAGACGACGACGGAGGCTCAGACGTCTTCAAC
TACATCGTAGAGAAGAAGGAGGCCGGCCGTGTTGGCTGGGCCACCGTGAC
CTTCAAGCAGCAGAAGAACACCTACCGCATCACCAACCTGGTGGAGACAT
GCACCTATTACTTCCGGGTCATAGGTGAGAACAAGTACGGCATCGGCGAA
CCCGTGGAGACGGAGGAGCCCATCTGTGCCCTGGATCCTGTCGAGCCGCC
AGAGAAGCCCAAGAACCTTACCGTGGAGGAGGTTACCCCGGCAACCGTCT
CCCTGGCCTGGAAGAGACCAGACTGGGACGGAGGCAGCCGCATCAGCGGG
TACCTGGTGGAATACCTCGCTCCCGGTGAGGAGGAGTGGACCAAGGCGGC
CACGGCCAGGAACGTGAGCTACACGGTGTTCGGGCTGGACCGCGACGCGA
CCTACCGCTTCCGGGTCACGACCCTGACGGAGCTGTCGCAGAGCGTGCCC
GCCGAGCTGCCGGAGCCAATCACGTGCAAGGAGGAGCAACTTGCTCCGAC
CCTTGACCTGAGCAGCATTAAGGGCGACACGCTGATCGTGAAGGGCGGTA
CGGACCTGACCCTCACCATCCCGGTCCGCGGCGCGCCCGACCCCACCGTC
GCCTGGATGCACGGTCTGCAGCAGATCCAGGAGAAGGGCCGCTACTTCAC
CAAGAAGACGCGAGAGTTCACAAGACTCCAGATCAAGAAGACGAAGAAGG
AAGACGGCGGGAAGTTCACGATTACGGCTACGAACGTGGTCGGAAGCACC
TCCGCTGTCTTCAACCTCAAAGTACTAGACAAACCTGGCCCCCCGTACGG
CCCCATCACCTTTGACGACGTCACTGACGAGTCGGTGATGCTTGGCTGGG
AACCGCCGAAGGACGACGGCGGCAGCGAGGTGACGCACTACGTGGTGGAG
AAGAGTGACGTGCGTACGGCGCAGTGGCAGTACGTCAGCTCCGAGGTCCG
CCGCACGCACCTGAAGGTCACCGGGCTGAACAAGGGCGCGCAGTATCAGT
TCCGCGTCAGCGCAGAGAACCGCTTCGGCGTCGGAACGCCGCTCAACTCC
AGCAGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:5573553..5579804 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96391_cuf70 |
| Biotype | protein_coding |
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