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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96413_cuf3 >transcript:BL96413_cuf3-protein ID=transcript:BL96413_cuf3-protein|Name=transcript:BL96413_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=153bp
HTLYIPVAENSHEGVYMCRTENAAGVATCSAMLHVQGAPQERPTSSGDEH
VSSCISSFSPMTNTSGSSTCENLTDHTSETNSQEGWCTPEQLSDVEGSPE
FIKELESLHAVQGSSVIFECEVTGSPAPAVTWYKDGQPLVEDGDHVSYES
RDD Run BLAST on NCBI mRNA from alignment at Sc0000008:5790888..5792994+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96413_cuf3 ID=transcript:BL96413_cuf3|Name=transcript:BL96413_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=2107bp|location=Sequence derived from alignment at Sc0000008:5790888..5792994+ (Branchiostoma lanceolatum)
TGCACACCTTGTACATACCTGTGGCGGAGAACAGGTAAGGATCACACCTT
GTACATACCTGTGGCAGAGAACAGGTAAGGACCACACCTTGTACATACCT
GTGGCAGAGAACAGGTAAGGACCACACCTTGTACATACCTGTGGCAGAGA
ACAGGTAAGGACCACACCTTGTACATACCTGTGGCAGAGAACAGGTAAGG
ACCACACCTTGTACATACCTGTGGCAGAGAACAGGTAAGGACCACACCTT
GTACATACCTGTGGCAGAGAACAGGTAAGGACCACACCTTGTACATACCT
GTGGCGGAGAACAGGTAAGGACCACACCTTGTACATACCTGTCGCAGAAA
AGAGGTATTTATGATATTGAAGTTCTCTCTAGACCCAAATTTGACACTGG
AAAGGAAAATTAAGGAAATTTAGTCCCTTTGTAATGGCTTGTTTTCTGAT
GCATGTATTGTCGTGACAGCCTCCTAACAATGACCAGCACATTTTGTGTT
GGTTTCATAAAGTGTTTGTTTTTTGGTATTTTGTGTCGGTTTCAACAGCC
CTAAGTACATGTTGTGTGTTGTGTCATACATTTTGTAGCAGGCTATTAGC
AGTATTGAAAGTGTTCTGAGGCCAGTTTAAGAGTACTGTGAAAAGACTTA
TAGACTCAGAGATGTTTATATCTTATAAAAATGTATGTTGTTTCCAGCCA
CGAGGGCGTGTACATGTGTCGTACGGAGAACGCAGCAGGGGTGGCCACCT
GCAGTGCCATGCTGCACGTACAGGGGGCGCCACAGGAGCGTCCCACCAGC
TCCGGGGACGAACACGTCAGCAGCTGCATCAGCAGCTTCTCACCCATGAC
CAACACCTCAGGGTACGACCTCTCACCTCTCAACTTTGCCTTCTGCACCT
TTCAACTATGGCACCTTCGCCTCTCAATTTCAATATTTAATACATTTTTT
TTACCAAGAGTACACCGTCCTTGGATACATAGAGACATTACAAAACAATG
ACAAATATAACAAGTTATGTAACAGTACAACATATTTACACAGACTTTAG
ATAACTAAGGCCGTGTTCCTCATGCGAATAAAAAAAGTTTTGGAAAAAAA
AATTGCCTTCATTATGAAATCTACGTGGTCAGGAAGGGTGAACAAAACTT
AACACACAGAGTATACCGAAATGTAGATTCTCCATTTTTGTTCTTTCAAA
ACGTCGTCTTTGACTTTTAGCACTATCATAATGACAGTATCCATTTTCTG
AAATATGTTTTTGCAATTTACAGCTTGTATTTTCTCATTGGCCGTTTGCT
TTATCTTTACAGAAGTTCGACGTGTGAGAACCTGACGGACCACACTTCGG
AGACCAACTCGCAGGAGGGCTGGTGTACTCCGGAGCAGCTGTCGGACGTG
GAGGGTTCTCCGGAGTTCATCAAGGAGCTGGAGTCTCTCCACGCCGTGCA
GGGGAGCAGCGTCATCTTCGAGTGCGAGGTCACGGGGTCACCCGCGCCCG
CCGTCACCTGGTACAAGGTACGGGGGGACTGTTCAGGACTGGTCATGGGG
AGGGTATGAAGTGGGGACTGTTCATGATTGGTCATGGGGAGGGTATGAAG
TAGGGACTGGTCAGGGTTAGTCATGGGGAGGGTATGAAGTGGGGACTGTT
CAGGACTGGTCATGGGGAGGGGGGTATGAAGTGGGGACTGTTCAGGACTG
GTCATGGGGAGGAGGGTATGAAGTGGGGACTGTTCAGGACTGGTCATGGG
GAGGAGGGTATGAAGTAGGGACTGTTCAGGACTTGTCATGGAGAGGGTAT
AAGGGGGGACTGTTCAGTATGGGTCATGGGGGTATAAGGTGGGGGGGCTG
CTCAGGATTGGAGATGGGGAGGATATAAAATAGGGACTGTTCAGGATTGG
CGATGGGGAGGGTACAATGTTCGGAATCAGGATCAGCACAACTGCTCATC
TTTGTGCGTGATATGTCCCAAAGTGTGGGATCTGTACATTGATGATTCTT
GGTTTTGGAATAAATGAGTTTTCATGTCTATTTCGTGCCCTCCTCCCAGG
ACGGACAGCCGCTAGTGGAGGATGGAGACCACGTTTCCTACGAATCTCGT
GACGACG Coding sequence (CDS) from alignment at Sc0000008:5790888..5792994+ >transcript:BL96413_cuf3 ID=transcript:BL96413_cuf3|Name=transcript:BL96413_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=459bp|location=Sequence derived from alignment at Sc0000008:5790888..5792994+ (Branchiostoma lanceolatum)
CACACCTTGTACATACCTGTGGCGGAGAACAGCCACGAGGGCGTGTACAT
GTGTCGTACGGAGAACGCAGCAGGGGTGGCCACCTGCAGTGCCATGCTGC
ACGTACAGGGGGCGCCACAGGAGCGTCCCACCAGCTCCGGGGACGAACAC
GTCAGCAGCTGCATCAGCAGCTTCTCACCCATGACCAACACCTCAGGAAG
TTCGACGTGTGAGAACCTGACGGACCACACTTCGGAGACCAACTCGCAGG
AGGGCTGGTGTACTCCGGAGCAGCTGTCGGACGTGGAGGGTTCTCCGGAG
TTCATCAAGGAGCTGGAGTCTCTCCACGCCGTGCAGGGGAGCAGCGTCAT
CTTCGAGTGCGAGGTCACGGGGTCACCCGCGCCCGCCGTCACCTGGTACA
AGGACGGACAGCCGCTAGTGGAGGATGGAGACCACGTTTCCTACGAATCT
CGTGACGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:5790888..5792994 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96413_cuf3 |
| Biotype | protein_coding |
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