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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96419_cuf5 >transcript:BL96419_cuf5-protein ID=transcript:BL96419_cuf5-protein|Name=transcript:BL96419_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=223bp
PVRTRVMRFIPMSWYFVLAIRVEFMGCRISGQTHRHIPDDVICGEGWGLY
KGGCYKRILAPLPWDQAETYCQALKGSLVSVHTQEEHDFLYARARTGWLG
LRLPDHVRPTEFRKEQRPEVLATMRWRDGMPVQPFFPWHPNDTVYDHARC
VEMTPPGYWILRDCNSPKKPFICKRDINPWIKEVYQLVNETSEHVKDPNQ
PIYPHAYNYDHDRFWGMQLVDMD Run BLAST on NCBI mRNA from alignment at Sc0000008:1867938..1871461- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96419_cuf5 ID=transcript:BL96419_cuf5|Name=transcript:BL96419_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=3524bp|location=Sequence derived from alignment at Sc0000008:1867938..1871461- (Branchiostoma lanceolatum)
CCCGTACGCACGCGTGTGATGAGGTTCATACCGATGTCATGGTACTTTGT
GCTGGCCATACGGGTGGAGTTCATGGGATGTCGGATTTCTGGTGAGACAA
ACAAATAAACAAACAAAAAAACAAATAAGTTCTCTGCCCCTGATGTACGT
TAAACATAACATAACATATCATTAATAATGGTTAAGTTGTATACATTTAT
ACCCGAAAGTGTTCATGCCTTTAAAGATACTTGACAGACATCTTGACTAT
TACTGTAACTTTTTAGACTTTTCATCTTCTCAAAGTTGCTGTCATCTGTA
GATTTACATTTCCAATGCCCCCAAAACTTTCTTGTTCACTAGAATACTTA
GAATAAAGACATGATACAACAGACTGAGTTCACTTTATGCCTGGGTTGTA
TACTTATTTCTTAAATAACTCATTCTTATCAAGCTCATTAAAAATTTGCT
ATTCACAGGTCAGACCCACAGACACATTCCTGATGACGTCATCTGTGGGG
AGGGGTGGGGGCTCTACAAGGGCGGGTGTTACAAGCGTATCCTCGCCCCC
CTCCCCTGGGACCAGGCCGAGACGTACTGCCAGGCACTCAAGGGAAGTCT
AGTGTCCGTACACACACAGGGTAGGTAGGTCTTACTTGAAGTGTTCCTCT
TCATATCTTGTAGTGTAAGTTATAGAACTCTTGCTGCTCTGTTGAACCAG
CATATGTATGTATGTATGTATATGCATGTATGTGAATCAGTCTAAAGTTT
CTAATAATTCTGAGCTCATACATTTTGTATTGGTAATTTTGGCACTTCTA
CTTAAATTTTGTATAAATCTCTTGGCTTTTTAACCTCCTGGTTTAGAAGC
AAATGACTCTACTCTCTGCATACAGGGACTCCAGGATCTCAGGCAAACAT
GACATTTATGTCCAGCCTACTAATTCAAATGTTAAGGCCCCAAATCTGTA
TTGGTTGGGTTAGGTAGCATGGGGAAGGTTAAGTTAACAACAGTAAGTTG
TTTTTCTTTGCCGCAGAGGAGCATGACTTCCTCTATGCCAGAGCGAGGAC
TGGGTGGCTTGGACTGCGACTCCCAGACCACGTGAGGCCAACTGAGTTCA
GGAAAGAACAGGTATTATGCCACATTCAGTTGTTACCTTCGCCAACTTGA
AGATAGTTATGTTTTTGGCAGTGTCCATGTGTGTGTGTGTGCGTCTGTTT
TTTTGTGTTCGCAATAACTCAAAAGGCCTCAATGGATTGTCTTGATATTT
AGTATGGTGAGAATTCGAGGTGCATGATTAGATTTTGAGTCCCCTAGCGG
CTTTTTATGGTACTGCAGCGGAACTACCAGTTTTGATATCTCGTGTTCTG
AACAAGCTATAATAGTAATGATTCTTGGTTGGTAGATAGCACTTGATTTA
TGATGTTTTACAACTCAACACAAATGTACCTGTTTCAGCAACACACCTCA
TGTGGTCATAGGAATCTAGTTCACAATTTCTAATTTGCATTTGCAAAGAA
ATTGGCAACCATGCGCATGCTCTCTTCAATCAAGTAATGTACATGTGTTG
TATCTTTAACATTGTTGATTATTTTTCTAATGTTAATTCAGCGTCCAGAA
GTATTGGCCACGATGCGCTGGAGGGACGGCATGCCTGTACAGCCCTTCTT
CCCGTGGCACCCGAACGACACGGTTTACGACCATGCACGCTGCGTTGAGA
TGACTCCGCCAGGTATAATGAGTTTTATTTGCAAGTTCTTACCCGAGGGC
TAATTGCAATATGAAACAATGCACGGGAAAAGTACAGATAGTAGCCTCTA
TACCAGGCTCCGCAGATCGCTGGGAAAATAGTACACGTCACCTATTGAGC
TTCACTGTTTAGCGGACTACCCTTGGCATACTATTCACTCTATTAGGCCG
ATTTCTACTATTTTCCCAACAATTCGCGGAGCCTGGTAGAGGCTATACAG
ACAGTGCAAGTTAACAATGGTGACGAGTGGAACAAGTGAATATCCTAAGA
ACTGCTACGGAATACAATCTAAGCTTTGACTTCTTTTTTTGGAAGCAGTG
GAAGACGAAGTGCCCCACTTTTTTGGCAATGAGTGGGTTATATATACTGG
CAAATTGAGGAAGTTAGAATTTAGCATGAATAGCTCAGTGTTATCAATGA
CAACTTAAGGGCAGAGAAAAACACCCATAGCACGTTAGAGGTTGAACCTT
TTCCTGTAGGATTACCCTCACATTGTATTCAATTGTGTTTTTCATATGTC
CTTTAAGCCCCTATCTCACTGGACCTGCGGCACACTGGCAACCTCGCTGC
GACCGATCAAATTGACAAAGCTCTCCATGAATTTCATCGATAAAAAACTA
ATCTTTTTACGCTTTGTGTAGTTTGTTGCCTTTTCAGCCATACTTGTATG
TTTTGTATGATTTTCCCATTATAAAGTCAAGGGTAACACAAATCCAGTTT
AGGATGCAGTGATGCTGCCAATGTATCCCACGGGTCCAGTGAGATTGGGG
TTTTAGTCAGTGTACACATACCTATACTGTGCTTTTACACAACTGCTCAA
TTTGAACAAATTAAAATGTCAGTCTATAACAGATGAATTTTTCATCACCA
CACTTAGGTTATTGGATTCTCCGTGACTGCAACTCTCCCAAGAAACCTTT
CATTTGCAAACGAGGTCAGTAGGATACTCAGTAGAGCAACTATCTCTATC
TATATGTATGCATGTATCTAATACTAAGTAGTTATCCATTGATGAATAGA
TAATTGAAAATGAATGAATGAATGATATGCAGTGCTGTCCTTGGTGCTGA
ATGCTCTGTTTTGTCTTCGGAACAATGTCTACCAACCCGTGAAAGACAAT
CATCTGTTTATATGTATCTATGGACAATGTACGTAACATTATATATCAAG
AACAGTGCTGCGTACCTAAACGTAACATCAGGTACAGGTACGGGTACAGA
GGTTTAGGTACAGGTCCAGACCTGTACCTGTACCCGAATAATTTGAAAAA
ATTAACATGTGTTGTTCTGATCTTCTTCAATAATGTCAGTATCTTTATTC
AAAGGACATAACTAGGTTTTCTACTGCCAAACTCCCCCGGCCTTGCTATC
AAAACTCCCCGCTTGCCTGAATGATCCGTTGCATATAAGTTACGCTGTTT
CAAAGTGTCACTTTGGTCACGTTTGGTGTTGCATGAGGTCAGGAGAATAA
AGACATACTTGGTGTGAATTTATATCGGTACAGTACCGGTACTTCATGAC
CCGGTATTTTGGACCTGTACAGTTTTTACAGTACAGTACTGGTACGCATC
ACTAATCAAGAAGCTATCCTTTGATACCCAGTCCTGTCCTTGGTGCTGAA
TGCCATGCCAATCTTTTTTGTCCAACAACAGATATCAATCCCTGGATAAA
GGAAGTCTACCAATTGGTGAATGAAACATCTGAGCACGTAAAGGACCCAA
ACCAGCCTATCTACCCGCATGCTTACAATTACGATCACGACAGGTTCTGG
GGTATGCAGCTGGTCGACATGGAT Coding sequence (CDS) from alignment at Sc0000008:1867938..1871461- >transcript:BL96419_cuf5 ID=transcript:BL96419_cuf5|Name=transcript:BL96419_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=669bp|location=Sequence derived from alignment at Sc0000008:1867938..1871461- (Branchiostoma lanceolatum)
CCCGTACGCACGCGTGTGATGAGGTTCATACCGATGTCATGGTACTTTGT
GCTGGCCATACGGGTGGAGTTCATGGGATGTCGGATTTCTGGTCAGACCC
ACAGACACATTCCTGATGACGTCATCTGTGGGGAGGGGTGGGGGCTCTAC
AAGGGCGGGTGTTACAAGCGTATCCTCGCCCCCCTCCCCTGGGACCAGGC
CGAGACGTACTGCCAGGCACTCAAGGGAAGTCTAGTGTCCGTACACACAC
AGGAGGAGCATGACTTCCTCTATGCCAGAGCGAGGACTGGGTGGCTTGGA
CTGCGACTCCCAGACCACGTGAGGCCAACTGAGTTCAGGAAAGAACAGCG
TCCAGAAGTATTGGCCACGATGCGCTGGAGGGACGGCATGCCTGTACAGC
CCTTCTTCCCGTGGCACCCGAACGACACGGTTTACGACCATGCACGCTGC
GTTGAGATGACTCCGCCAGGTTATTGGATTCTCCGTGACTGCAACTCTCC
CAAGAAACCTTTCATTTGCAAACGAGATATCAATCCCTGGATAAAGGAAG
TCTACCAATTGGTGAATGAAACATCTGAGCACGTAAAGGACCCAAACCAG
CCTATCTACCCGCATGCTTACAATTACGATCACGACAGGTTCTGGGGTAT
GCAGCTGGTCGACATGGAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:1867938..1871461 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96419_cuf5 |
| Biotype | protein_coding |
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