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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96441_cuf9 >transcript:BL96441_cuf9-protein ID=transcript:BL96441_cuf9-protein|Name=transcript:BL96441_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=391bp
EQLSFPDAEKRCVDEGALLAMPHDAETDQFLISLKNSVNPDSMFWIGLSD
QSDPGLFKWNDGTRLQPSATKWHPGEPTITWSGENCVLYLSSSSNSWVDR
HCTTEIASYICEVPARCPFINVSGLLGDSTSRMGTYLLTDMVSSDRPVYK
HLTNDQYIYATNDPNLPHPVGWYIGPEVGASHGCPSDYTHTQGRCLKIYK
EKMTYSSAVATCAADHGVVMMPTNSELNGELATVVGEEHENYWIGLTDPG
DGRRWIWTDGSVLEDGDFMDWKYSWQREPSRMWGKGENYCVAMLYSNGKN
WEPISCDDRFRFICHISILFTRATSAHPAKKVMWQRRASYQITTLPQLQV
DCLENHIGLTAGVALNVTASSVWPDAEFCQPHESHLNSPSS Run BLAST on NCBI mRNA from alignment at Sc0000067:596775..602953- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96441_cuf9 ID=transcript:BL96441_cuf9|Name=transcript:BL96441_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=6179bp|location=Sequence derived from alignment at Sc0000067:596775..602953- (Branchiostoma lanceolatum)
GAACAGCTGAGCTTTCCTGACGCAGAGAAACGTTGTGTGGACGAGGGAGC
TCTCCTTGCCATGCCACACGATGCTGAGACTGATCAATTCTTGATTAGGT
AATAAACAGATTGAAATTCCTGTTTTGTGATTTTGGAAACTGTAATTGAA
TTATCATTTGTATTTGGCCACTTGATTCACAAGTTTACTTTCTGTTGATA
CATATATGACTGATGCATACATTGTGCATGTGATACATGTAGCTTTGTCA
TGAAAAGAAAATTGATATCATTTACCTTTAAGTTTAAGTTAGATAGCCAA
TTTCAACAGAATAATATACTTGAATCAGAGAACATTTCTATCTATCAATT
TTTTAATCTTAAGAAATATTTTTTTCAATCTTTCTTTATTCATTTTTTTT
CAAATGAATAAACAGAAACAAAGTATGGCAGTTTACAACAAGACACAATG
TACCACAATATCAAAACATAAAATCCAGAAACAGTCATTTTGACAAGCAA
AAACAATGTTTCACCACCCGTTTATCTTATCCTATATGTTGTATCTATCA
GGGGACATTTTGTAAGACAATGTACATGCTGCTTCATCTTGACAATATTT
CTAACTTTCACAAATTGCATTTTATTTTTTTCCACAGCCTGAAGAATTCT
GTGAATCCTGACTCAATGTTTTGGATTGGGCTGAGTGACCAATCAGATCC
GGGATTGTTTAAGTGGAATGATGGTACAAGGTTGCAACCCAGCGCCACTA
AATGGCATCCAGGAGAACCTACCATCACTTGGAGTGGTGAAAACTGTGTG
CTTTACTTGAGTAGTTCTTCAAATTCATGGGTTGACAGGCATTGTACAAC
AGAGATTGCCAGTTACATCTGTGAAGTACCAGGTATTTACATCTAATGTT
CTTTTTAGTTAATGATTGTTATGTTTAGCCATAAGTATGGCTAAACATAT
TGTTTTCTCTCATGTTTCTTCTTCTTCTTCTCCTGTCAAATCTTCAAATC
GATTCATCTCTGTCATTTTTTGACCAAATGACCTGAAATTTGGTACAGAG
GTAATGTAGGCAAAAACCAATGTGCGTTCTTTTCCTTGTTTTGATATTGA
CCTTGAAAGTGATTTTATCGAGGTTTTTAAGCTATTTTTAGCATATCTTG
GCCTCCTGCGCCCTGGTATTTCAACCGAATGACCTGAAATTTGCTGTATA
TGTGGCTTGAACAAATATTTAAAGGACTACATTCCCATTTTTGGCATACA
TATATTCAAAACGATTTATTTTGGGCTTTCTTGACAATATTTGCCACTTC
TGTCACTTTCAATACTACATATGACCTACAGGTCATTGACCCCGAGTGCC
TTGCACCTGGCCAAGCTGGAAGTTTGCTTACGAGGAGGAAAGACCGGACA
TAAACATTTAACGTGATTATCGGGAAAACACCATGTTCCCTTAAACTCAG
TGGTTAAATTGCAGTTTAGGAAATTTTATAACAGAAAACAAGTTAAATCA
ATGATTTTGTGAATGTTTATTCTAGCATTAGTTATTCCAGATATTTTCAA
ACTCCAAATTCTTCAACACAACACGGGAGATCGTTTCTCCTCAGACTGGC
GCGACACTCCTGTCAAAATTGATTGATGATCTCTCTCTGCCGCCGACTTC
ATACATGATCAAAGGCGGGTGGTAGGCGGTGCGCGGGGAAACTTAAACAT
ATAATGTAGCGAAGTGTTGCACAAGGAATTCTCACGCTGAGGGGTACATG
AAATAATGCTTACAAAATAGACCTCTATGAATCGGGCTACATTCAGCAAT
GGTAGACGGATTCGGGGCATGCCGCGCAAAACACATGGTCTCACTGGGGA
CAGGCGTTTTGGTCCCGCACGTTGTCGCAGCGGTGCGTCGCCGCTACGCG
ATCGAAAGCACGCCGCTGTCTGTCTCGGACCAACACGCGTCTCCCGTGAT
GTGTAGCGTCCACCACCAGGCCTTCCTACATGTCCTACGTACGGGCGTAT
GGATCGTAGAATTCGGCAAAAAAGGAATGATTAGGCCAGTAGAGTCAGTC
CCCGGTAAGGTCAATGATTCGCCCCTTTGCGCTAGCTTGTAACGTTAAAT
GAATGTACCCTCTGGTGGCCAAACTTCACTGACAAACTTTCTCCCTATTA
TCATCATGAGCTTGCGTTAGTCTGGTACTAGTGACTATTATGTGCCGGGA
ATGTTTATCTATCGCACGCCTTGGAAGGAAGTTCAACCATGATAAATGGT
CGGCCGTTGCGAAAATTTGGAATCCCATGCTGTTGATTTTCGTGATTGAA
TCTGTAAGAAAATATATTTTCATGTCGTTCATGTTTTTGGGACGGACGCC
GGGACGGGGTGAATTTTTTCTATCATTTTCGTCCCGTTAGTAATGCAAAT
CGAATCGTGTTGCACAAGAGGCAAAACACTAAAAACGTGGGTCTTGTGGA
GTGTTTTGGAGCGGGAAAATGCCGGATATTAGCGGTGCCGAACAGTGTAC
ATCGTCGCGCGCGGGTGACGCTCCGTCAAAACAAATCCGCTGGTGGTCTA
GCGCGGCCACCGAAAATAGGCAGAAACACACAGGAGGACTTAGCACCTTC
GTTTATGAGGGCAATTGTGAAAATCTTTTGTTACAAATTGTTCGAACATT
GAAACATTTGGATAGATGGTTTGAAACTGTTCTAAATAAAGAGATTTTTG
TGTAGTTACGTTCGAAATGTTTCCAACGTATGTGAAATAAGTTCAAACAT
GTTATAAGTTTCAATTCTAATTGTTTGAACACTTTAGAACTATTGTGACT
TAGACATTCTTTTAATCAAAATAGTTCAAACATATTACAAATATTATATT
AAAACCCTCTCGGTGACTTTGAATTGACTCAAATATGTTGTTTTTGGTCA
TTTCCTTCGTCTCCTGTCAAATCTTCATATGTATACTATGGAAAACTTCA
TTCTTCCCTGGGGTTGATCTTTTTTAATTCAATTTTGAACTGGGTTGATT
ATGCGCAAGAGTGTAATTTTCAGCGGATATTTTTCGACTGGTTTACATGG
AAATGGCACGGAATATCCCATTCTTGCGAGGGGAAGATTCTTTAATTTTC
TTTCAATTTTGAGCTGGAATGATTATGAAAAAGTCCATTTTTTAGCAGAA
GTGTATTTGTTAATCAATTAGTGGATATGGTTGTAGACTGGTCCATATTG
TGTTGAGGTGCTACTGGAAGACTCAATTTTGGACTGGGGTGATTCAGGTG
ATTTTTTTAGTGCAAGTATTTTAGAATGGTCCATTGTTATTTTGGGAGAG
TCCATTTTTTGCATGGCGAGGAGTATGGCTAAACATGCTGTATTTGCTCG
CAAATGTTGCCTTTCTAGTTTGATAATGTGTTCTTTGTAGAATTAGAGAA
TGTCTGCACCTGCTCTGTATGGAATCTTTGACATTCTCCTCTAATGTTTA
GTTTTATTTACTTTGCCGTCAGCCACTGGTCTCATGTCTAGGTGATGTGT
ATTATTGATCAAACAGATTTTATGTAAAAGAATGTATGTTCTGTCTTCCA
TGTTAATGTTGTTCCACCTGCAAACCTTAAACAGTAAAACGCCTCTTTCC
CCTCCTACTACTAAATTAATTCCCTTCAAACTTAACACAATTTACAGTCT
GCCTAATAGTCTATTTCATATCTTTCATTTCATAATGATGACAATATTAA
TGTATAATAAATGCTGGAGGTCGAACTCTGTTTTTGTTTCCCAATTCATT
GACAGAGTAAGATATTAGGTATAGATAGATATTTCACCAAGTCCTTTTAT
TGTCCATAGCACGCTGTCCGTTTATCAATGTGAGTGGTCTGCTTGGTGAC
AGTACCAGTAGGATGGGGACTTACCTGCTTACCGACATGGTCTCTAGTGA
TCGGCCAGTCTACAAACACCTGACAAATGATCAGTACATCTATGCCACTA
ATGACCCCAATCTCCCCCATCCTGTGGGATGGTACATTGGACCAGAAGTT
GGTGCTTCACATGGTAAGAAACAACACAGTTCAGTAAAATTACACGAGTT
AGTTTGTTTTAAGTGGAATGTCAATATTCAAGTATATGGGGCAGACATTC
AGAGAAATTCAGACACAATTTCTAGTTATTTGTGATCATTTTTCTGACAC
CCAATTGGCTGTCTGAAATGGTTGTACATTGCTCATTTTGAAAGGTAAGC
TTTATTGAATTGTGTATTTCTTACTGTAAAATTGTTACACACTAGAATAT
TCTGGGCTTTTATGTGAGATAAAGGAGTTTATCAATCTTGACATATTTTG
GATCCATAGAATCAAATAATGTACTGGGTGCAAAGTTATGATTGGTCTTA
AATAGGATTATTGTATTCTCTGAAGGGCTGTTAGTAGCAGGCCTAAATTT
TCAGCTTGTGGCCTGTATCGCAGCACTTACTATACAAAGCGGTGGGAGAA
AGATTTTCATCGAGGTCCCTTTTTTTATATTAGGCCATGTTTATGTTTTC
ACTTTTACTTTAAACAGTTTCAGTATGAGGCACCAGTTGAGCACATGATA
TGGGGTAAAATTCTCGGAGCTGGGCTACTTTTAGCAGCCAACTGCAATGA
TTATTAACAAAACGTTATACTTTTCAGGCTGCCCATCAGACTACACCCAC
ACCCAAGGAAGATGTCTGAAGATCTACAAGGAGAAAATGACATACTCCTC
AGCAGTAGCAACCTGTGCTGCTGACCATGGTGTCGTCATGATGCCTACAA
ATTCTGAGCTAAATGGAGAACTTGCAACTGTAGTTGGGGAGGAACATGAA
AACTATTGGATCGGATTGACTGACCCAGGGGATGGCAGGCGGTGGATTTG
GACAGACGGGTCTGTGTTGGAGGATGGAGATTTTATGGACTGGAAGTACA
GTTGGCAAAGAGAACCGAGCCGGATGTGGGGAAAGGGGGAGAACTACTGT
GTTGCCATGTTGTACTCTAATGGTAAAAACTGGGAGCCCATAAGCTGTGA
CGACAGGTTCAGGTTCATCTGTCACATCAGTAAGTCAGTCATCATTAGCT
GTAAAAGTTAAAGTACTGATTATCATTTAAGGGACAAGATATTTTCTCGG
TGCTGAGTACAATGGTGTGCAAACAAGGTGAATACGGAAGTTTTTTTGAG
TCACTTTCATGATAAAAGCTGTAAGGTTTACTGCTTTCTGATCAAATGGT
TCACCCAAATATGAAGTTTTGTGCATCGAAAAGTAAAATTATGTCAGATT
ACTAAAATCACTTGATATTTGATAAGTTACTCACATTGCATTTACACTAT
AAGTACATTATCTGCCAATATAATTTAGAGCTTACTGTGTCATGTGTTGA
TCATGTACTTATTGCACTGCTTGGATTTTGTGCAGGTATCCTTTTTACAC
GTGCAACAAGTGCCCACCCTGCAAAGAAAGTTATGTGGCAAAGAAGAGCT
AGCTATCAGATCACAACACTGCCTCAGCTTCAAGTTGACTGCCTTGGTAA
GATCATTATCATTTTACCTCACTGTTTGACTAAATGTTTAAGTGGTTTAA
AGACATGTAGCACCATGCCTCATATTCCTATCAGGTACCCTAAGACCACC
ACATTAAAAAAATGATGTTATCAAAGCTTTTCAAGAATATTTGAATAACA
AGATATCTGAACTGTGTGATAAAAAAACTGTATACTATGAGAGTTGACGT
CCCAGTCTTATGACCTTTTGGTCTCATTTACAAAACCAATTGAAATGTGT
CAGATACAATTTCAAACTTAGTTTTGCCATCGTATCAAAAGTTAACTGGT
CATGTTTCAAAAGATGCTTATTGTAACTTAGTTGTTAACTGCACAATAAT
GCCCTTTTCATTGCTTTTGATCTGGGATTTCTTTTATGAAATATGATTTT
ATTTCCACATTTCATAGAAATTACTAGGACTTCCATGTTTGTTTGTTCCC
AGCAATGTAGGTTTTAGATTGATGTATTGATAAAATGTTCACTTTTGCTT
GAGCAGATACCGGAATATTATATGATACATTGATTTACTGTTGTTACATT
TTTGCTTCATGTCCAGAAAACCATATAGGCTTGACAGCAGGGGTTGCTCT
AAATGTCACTGCCTCGTCTGTGTGGCCTGATGCAGAATTCTGTCAACCTC
ATGAGAGTCATCTGAACTCTCCCAGCAGC Coding sequence (CDS) from alignment at Sc0000067:596775..602953- >transcript:BL96441_cuf9 ID=transcript:BL96441_cuf9|Name=transcript:BL96441_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=1173bp|location=Sequence derived from alignment at Sc0000067:596775..602953- (Branchiostoma lanceolatum)
GAACAGCTGAGCTTTCCTGACGCAGAGAAACGTTGTGTGGACGAGGGAGC
TCTCCTTGCCATGCCACACGATGCTGAGACTGATCAATTCTTGATTAGCC
TGAAGAATTCTGTGAATCCTGACTCAATGTTTTGGATTGGGCTGAGTGAC
CAATCAGATCCGGGATTGTTTAAGTGGAATGATGGTACAAGGTTGCAACC
CAGCGCCACTAAATGGCATCCAGGAGAACCTACCATCACTTGGAGTGGTG
AAAACTGTGTGCTTTACTTGAGTAGTTCTTCAAATTCATGGGTTGACAGG
CATTGTACAACAGAGATTGCCAGTTACATCTGTGAAGTACCAGCACGCTG
TCCGTTTATCAATGTGAGTGGTCTGCTTGGTGACAGTACCAGTAGGATGG
GGACTTACCTGCTTACCGACATGGTCTCTAGTGATCGGCCAGTCTACAAA
CACCTGACAAATGATCAGTACATCTATGCCACTAATGACCCCAATCTCCC
CCATCCTGTGGGATGGTACATTGGACCAGAAGTTGGTGCTTCACATGGCT
GCCCATCAGACTACACCCACACCCAAGGAAGATGTCTGAAGATCTACAAG
GAGAAAATGACATACTCCTCAGCAGTAGCAACCTGTGCTGCTGACCATGG
TGTCGTCATGATGCCTACAAATTCTGAGCTAAATGGAGAACTTGCAACTG
TAGTTGGGGAGGAACATGAAAACTATTGGATCGGATTGACTGACCCAGGG
GATGGCAGGCGGTGGATTTGGACAGACGGGTCTGTGTTGGAGGATGGAGA
TTTTATGGACTGGAAGTACAGTTGGCAAAGAGAACCGAGCCGGATGTGGG
GAAAGGGGGAGAACTACTGTGTTGCCATGTTGTACTCTAATGGTAAAAAC
TGGGAGCCCATAAGCTGTGACGACAGGTTCAGGTTCATCTGTCACATCAG
TATCCTTTTTACACGTGCAACAAGTGCCCACCCTGCAAAGAAAGTTATGT
GGCAAAGAAGAGCTAGCTATCAGATCACAACACTGCCTCAGCTTCAAGTT
GACTGCCTTGAAAACCATATAGGCTTGACAGCAGGGGTTGCTCTAAATGT
CACTGCCTCGTCTGTGTGGCCTGATGCAGAATTCTGTCAACCTCATGAGA
GTCATCTGAACTCTCCCAGCAGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000067 | genome | Sc0000067:596775..602953 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96441_cuf9 |
| Biotype | protein_coding |
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