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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96451_cuf6 >transcript:BL96451_cuf6-protein ID=transcript:BL96451_cuf6-protein|Name=transcript:BL96451_cuf6|organism=Branchiostoma lanceolatum|type=polypeptide|length=117bp
ADGKTCKEIGCFPDCMSGGSCVNNKCVCPTGLNGPTCQQDVNECLENNGG
CDEICRNTFGSYNCFCKPGTNLNPDGKTCSDGTCQPACENGGKCENGICL
CQEGFMGPSCAIGEYIR Run BLAST on NCBI mRNA from alignment at Sc0000243:354175..356759+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96451_cuf6 ID=transcript:BL96451_cuf6|Name=transcript:BL96451_cuf6|organism=Branchiostoma lanceolatum|type=mRNA|length=2585bp|location=Sequence derived from alignment at Sc0000243:354175..356759+ (Branchiostoma lanceolatum)
ACGCAGATGGCAAGACATGCAAAGGTAAGGATGCTTCAAGAGAAAATCAT
GAAGCAAACATTTGTAGTTAAGAGATCTGCACTTAAATGCAAGTCAAATA
TAGTCGTATAATCAAGTCAATTAATTAGAAAGACAATCATACCGGTACCA
TATTTTTATAATAACCCTACGTGGAAGGCAAAGCAACACTGCTCATAAAA
GGCATCATACACTTTCAATGCAGAAGCATACCAGGAAGTAAACAGGCAGT
AACTTTGGCCAAAAATCATACATCACTTTGTAGACGATTTTTAGCCATGT
TAGTATTTGATATTATTTCCCAGCAGATAATGAGAAACTTTAAAGTGAGC
TCAGACATGGACTCTTGAAACCCTTTCAAAGTTTCAACACTTTTCCCCTG
TGTACTACAACGAATTGGTGTATGCACCGTTAAGAGTTGTTGTGATATGA
CGTAAACTTTTTTCAGAGATCGGGTGCTTCCCTGACTGTATGAGTGGAGG
GAGTTGTGTGAACAACAAGTGTGTGTGTCCGACAGGACTGAACGGACCGA
CCTGTCAGCAAGGTCAGATTTGTCTTCATTTCCTTTCTTTGTCATCCAGT
CTCATCTACACTCACTTTCTGGCTATGATTCATTTCAGTAACGCAATAAT
AGAGTCCATAGTCGCCTACGGTCTGTCACACAAATCTAATCATTGCACTG
AAAAATCCTTTGTAAGACTGAAGTTCTTGATAAGATGCTAGACACATAGA
GCAATGTCCTTTCTTTCATTCATAATTCTCCAAAATTACTATTATTCAAT
TAGGTTCTTAAAATTGAATTCAAAGCCTTCATTTTGCTTTTATGGCTTGT
TCGGCTGTGTGGTTGCTTTTTAACAGGGTCGAGTTCATATGGAGGTGGGT
CCCAGATAGTCTTTTAAAAGTTGTAAATAATAAACATTTACAATAAACAA
ATCGTTGTGTGTCCCCAGCCTAAAACGTTAGTTGTTGTCATCCTATGTTG
TGTTGTGTTTTTCAGATGTGAATGAGTGCTTGGAAAACAACGGTGGATGT
GACGAGATCTGTAGAAACACTTTTGGCAGCTACAACTGTTTCTGTAAACC
AGGGACTAACCTCAACCCAGATGGCAAAACCTGCTCAGGTGAAGATACAA
AACAGTGTAAACTCACATTTTGGGAGGCTAGAATCCCAGATGCTCTTTGC
AATGTTTGTCTTAGGCAGATGGGTAGTACAACAGTTACTGTAAAATTGCA
GAAGGATTTTGTATGGTTGGATTTTTATCCAAATCTGCCCAGACCTGAGT
TGTTCTAAGAGGGGTTCCCGGAAAAGGTGGGGTGGGATAGTGGGGTGGTC
TACCTCAGAATGCTACCCTTTCTGGGCTATGCATGGAGGTTGTACAATGT
ACATGTACTGTATGCTCATTGCCAACTGTAGCACACATGCACATCACCCC
CATCCCCACAGCAATATGATCAGTTGCATTCCCTCCAGCGCACCCACAGA
TTGACCCATCTTTTCCTCAAGGAAAGTCCATTAGATGCCAAGCCCCCATG
AATAGCCTTGGGGCCCAGAAAGGGTAGAATGCTGAAGTAGCCCACTGTTT
TCGGGAACCCGTTCTAAGAGATGATTTCCGTACAGCAAACTTGGTTTCGT
TGCTTCCCTCTTTCAGACATCTATTTGTATTACTGTTAGCAGGATAATGA
TACTATACACCAATAGTCCATAAGTGCAATGCTTTGCTTTTGAGCAGATG
CCCAATGTTTTTCTTGTGCCTTTGTGTAGATGGCACCTGCCAGCCTGCAT
GTGAAAATGGCGGCAAGTGTGAGAATGGCATTTGCCTTTGTCAAGAAGGA
TTCATGGGGCCCTCATGTGCTATTGGTGAGTACATAAGGTAGATGTAGAT
ACTTCTTTTAGTAATAGGAATATAATGAAATCTTTATTGACACGACAAAA
GTACAGTTACTTCCGTAAGGTCTTCTACAACTATACATGCAAACAACAAA
CAATGTATACTCAATGATGCATACATTTGGAAACTTGAGTTTGGGGCATT
GTTTGACATAGATGGAGACAAGTTTTCCATATAATGTAAAACACAATCTT
TATATTTAAGAAATGCCAATGGAGATACATGTATCATCAATCCTGTACAA
GTGACCACCTCTACATAAGGACCACCTGGCCAATATGGCCACGGTCTGGT
GGTCCCTTATAATTAGATAATCTTCCAGTTGACACAAGCATTAAGAATGT
TCTCTATAGTCAGGGACCAGCAGTCCTGTCCACATACATGTAGACCAGAT
TTTATCAGTCCTGTGTCTTCTTTATTTTCTTTGACAGACTAAACTCAATT
TTGCAAGTTCTGACATGTTACATATTAACCAAGTCATGTCGTGTATTTCT
TGATCCTTAACAATTTTTATATTAATTTTGACAGAAGAGAAAGTTACATA
ATAGAGCTCCTGTGACACTATCCTGTCCATAGTACTGAATACATGGCTGT
TGTGGCATTCCACTTTTCCATTGGATGTTTTAGGGTATCTGAATGTAAAG
CAATAATGTAATGTAACATTACCCCCTGCCTACAT Coding sequence (CDS) from alignment at Sc0000243:354175..356759+ >transcript:BL96451_cuf6 ID=transcript:BL96451_cuf6|Name=transcript:BL96451_cuf6|organism=Branchiostoma lanceolatum|type=CDS|length=354bp|location=Sequence derived from alignment at Sc0000243:354175..356759+ (Branchiostoma lanceolatum)
GCAGATGGCAAGACATGCAAAGAGATCGGGTGCTTCCCTGACTGTATGAG
TGGAGGGAGTTGTGTGAACAACAAGTGTGTGTGTCCGACAGGACTGAACG
GACCGACCTGTCAGCAAGATGTGAATGAGTGCTTGGAAAACAACGGTGGA
TGTGACGAGATCTGTAGAAACACTTTTGGCAGCTACAACTGTTTCTGTAA
ACCAGGGACTAACCTCAACCCAGATGGCAAAACCTGCTCAGATGGCACCT
GCCAGCCTGCATGTGAAAATGGCGGCAAGTGTGAGAATGGCATTTGCCTT
TGTCAAGAAGGATTCATGGGGCCCTCATGTGCTATTGGTGAGTACATAAG
GTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000243 | genome | Sc0000243:354175..356759 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96451_cuf6 |
| Biotype | protein_coding |
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