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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96456_cuf4 >transcript:BL96456_cuf4-protein ID=transcript:BL96456_cuf4-protein|Name=transcript:BL96456_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=452bp
MRYRIAPTVQQRCVLSRCLPFRLWKYSLPVVLVLLLAYTVFSVQLQWRSV
TWRQPRRAGKETSKNNLIETTQSGKYDSIDNTSRSWTTVEAGTTHSHKTI
VQTARPTGTSNCVTHTSIAFIKVHKCGSTTLQRSFLRFGFTHRLNVALPR
GRDSPTIGHDGLITRDDYEPSPGGARWDMFAHHGTYNRTQLLQLMKKDTK
FITVLREPVSRLLSAFHYFRMERYFPGLLNETGQGSPVITYLDDVKKWNS
VYVPPKDRDFADHICIRNCMSRDLGLPEEDFDNRTAIDKFIRGIDRDFSL
VMILEHLDQSLILLRRRMCWLFEDIIYDNLYWSRRARYRKRDVITEDRRQ
NFIEENYADYLLYKHFKTILWSKIKREGPDFDLELQHFRRINAVIGRNCH
TVTRPKSFILGPSRWNQRIRIYNHFCTLIRQERFFWDRMFRKRYKTMEKT
KH Run BLAST on NCBI mRNA from alignment at Sc0000235:304786..308033- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96456_cuf4 ID=transcript:BL96456_cuf4|Name=transcript:BL96456_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=3248bp|location=Sequence derived from alignment at Sc0000235:304786..308033- (Branchiostoma lanceolatum)
GTGGAGCGAGCCGTGCGGTGAAAAGAACGTGCTGAACTAGTACAAAGGTA
CAAAATCGAGCGGAAATTAACGATGACACGGCAAAGCGTTTGGAGCAGTC
GGATTTGAAATATGAGGAAAGAAGTGCCATTATATATACAGCTATTGAAA
ACTAGGCACTAGAGCATTGAAGCATAACTACTTGGGTACAATTTCATAAA
TGACATAGTTTTTTGTATCATGATAACACACTAGATACCCACGACGGCAC
CCACTATACAGTTCAGGAACCCATCCGAAAACCGGGTCAACCAGGACTGA
AAAAATATAACGGCCTAAACAAACGCGTGATCGCTGTGTAGCGGTATTTT
CACGGTAGCCAAACACGCATTGCTGACTTGAAGCCTTCTGATGTCAGCTT
CGCACATTCCCCAAGTCGGTTTTGTCCGCCTGGAACAGGCGCCGGCCCAA
ATACCAACCTGAGACCACCACGCATCACCCTAAAGGACGTCACCCTATGC
AGGAGCTAGAGTGCTGTGCTGGCGGGTCTGGAAACAACAACAGGGACTCT
CTAGCTGGAAAACATGCGGTGGGTCTACGATAAATCAAACAGCAGGTACG
TAGATGTGTACGTTATGTTGTGTAGAGATATGTACGTATCCACAATTCAC
AATTACAGGAACATGCGAGCCCGACACGTATATGACGCTATTTCTGGTGT
AGGATGTTCCTAAGCTGCGCTGGCAGACTTGGTCTAGTGCCAATTGTACC
ACCATTTTATACCACTTACAAGGCCACTGCATTTTCCTTGCTTGCATGTA
CGTTGCGTCAAATGTATGGCTTAAACCAAGCAAATTGGGGAAATTGTATC
TGTGTTTCGGAAAGTCTTTGAATGCATGTTTCTTACACGAACGTACACAA
TAGAGAATAAAATACATAGTGAAATATTTTGATGTTTAATTTCAATTTTC
TTTGTTCGGACGATTGCATAGGGACAGAATCCTGCAGTCAGGCAATTAGT
GCCCTACAAATTTGCCCTTTTGTATAAGGTATATGTGGTATACAGACTAA
CTCTTGTATAAGGCTTGCAGATGTGTTACGAATAGATCCCTGGCATTTGA
TCCTTTATTAGTACTAACCGACTTGTCAGTTATCAAGTAGGGTCTTTGCC
TTCTGTGACTCTATGGATCGCGGTGGCCCGGGGACTCGGCCACACATGGC
GCCTTCTCGTCAATGACTGTATCCCGTCTGTCAACTGTTATTTTGACGCA
TTTCGATAGATGACGCTTGTGATACATGACTGTCAGTTTGGGTAATAAAT
CGGCGCAACTGACAAATATTTTCCAGATACAATGTGTTTACTTTGTAAAC
TATATGAATGTTTCTGTCGTTTTTCTCATTTGTGAGCATCTAGCGTTGTC
TGCCAAAGAAAGGCCCGGAAGGCTAAGAATTTACAAAAAACGGAAGATAC
ATACTAGTACGCTGCAATAAAGCTTTCAAAACTACCATGTGATATTCCAT
CCACACCACAGGTATAGGATTGCACCGACAGTACAACAGAGATGTGTGTT
GAGCAGGTGTCTGCCGTTCCGGCTGTGGAAGTATTCCCTGCCCGTGGTGC
TAGTACTGCTGCTGGCGTACACTGTCTTCTCCGTACAGCTGCAGTGGAGG
TCTGTAACATGGCGTCAACCAAGGCGGGCCGGGAAGGAGACATCCAAGAA
CAAGTAAGAAAAAGACATTAAAAGATGGCGATGTTTTTGCAGACATTATA
GGGAGATGGAAAGAAAGGTATCAGTCACGAATAAGCAGTTGCCTTTACCC
TTGCATGGAGACACAGTTCATGAAAATGTCATCACTGGCAGGATCTTTGA
CGACAAAGCTGTACTGTGTTTTCTCAAATTTCTCTCCATGCATCAATCAT
GATATTTCGAAGGACGTTACACTAATTGAAAAATTCTTCTGTGCAAAATC
TGTATCAGGAATTTCTGTAATCAGATTGCTTTTGTTTTTCCCTCATCAGC
CTTATTGAGACCACCCAAAGTGGGAAATACGACTCCATCGACAACACATC
GCGATCGTGGACGACTGTGGAAGCTGGCACCACTCATTCCCACAAAACTA
TTGTACAAACCGCCCGACCCACCGGTACGTCCAACTGCGTCACTCACACA
AGCATCGCGTTCATCAAGGTGCACAAGTGTGGCTCTACTACACTCCAGAG
AAGCTTCCTCCGCTTCGGCTTCACCCATCGTCTGAACGTCGCGCTCCCCC
GGGGACGGGACTCCCCCACCATCGGGCACGACGGGCTCATCACGCGGGAC
GACTACGAACCGTCCCCGGGGGGAGCTCGGTGGGACATGTTCGCCCACCA
CGGCACCTACAACCGAACCCAGCTTCTCCAACTGATGAAAAAAGACACTA
AGTTTATAACAGTGCTAAGAGAGCCTGTCTCTAGGTTGTTGTCAGCATTC
CACTACTTTAGGATGGAAAGATACTTTCCGGGTCTTCTGAATGAAACAGG
GCAAGGCTCCCCTGTGATAACATATCTGGATGATGTGAAAAAATGGAACA
GTGTCTATGTCCCACCCAAGGATAGAGATTTCGCAGATCACATTTGCATC
AGGAATTGTATGTCAAGAGATCTTGGACTTCCTGAGGAAGATTTTGACAA
CAGAACCGCCATTGACAAATTCATCCGTGGTATTGACCGAGACTTCTCAT
TGGTCATGATCCTGGAGCATTTAGACCAATCGTTGATCCTGTTACGGCGG
CGCATGTGCTGGCTATTCGAGGATATTATTTACGACAATTTGTATTGGTC
GAGAAGGGCACGGTACAGAAAACGTGACGTCATCACAGAAGACAGACGAC
AAAATTTCATTGAGGAAAATTATGCGGATTATTTGCTGTACAAACATTTC
AAAACGATTCTTTGGAGCAAAATCAAGAGAGAAGGGCCAGATTTTGACTT
AGAACTGCAACATTTCAGGAGAATAAACGCCGTTATAGGTAGAAACTGCC
ACACAGTAACGAGACCGAAAAGTTTTATCCTGGGACCGAGTCGGTGGAAT
CAAAGAATCCGCATCTACAACCATTTCTGCACCTTGATACGGCAAGAACG
GTTTTTCTGGGACCGGATGTTTCGCAAAAGATACAAAACTATGGAGAAAA
CTAAACATTAATAACATTTGTTTGTTTGTTTGTTTGTTTGTTTTACTTTA
AACAAATGTAAGTTTATCATAAACGTTATGTAAAACGCCAGATGTTGT Coding sequence (CDS) from alignment at Sc0000235:304786..308033- >transcript:BL96456_cuf4 ID=transcript:BL96456_cuf4|Name=transcript:BL96456_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=1359bp|location=Sequence derived from alignment at Sc0000235:304786..308033- (Branchiostoma lanceolatum)
ATGCGGTATAGGATTGCACCGACAGTACAACAGAGATGTGTGTTGAGCAG
GTGTCTGCCGTTCCGGCTGTGGAAGTATTCCCTGCCCGTGGTGCTAGTAC
TGCTGCTGGCGTACACTGTCTTCTCCGTACAGCTGCAGTGGAGGTCTGTA
ACATGGCGTCAACCAAGGCGGGCCGGGAAGGAGACATCCAAGAACAACCT
TATTGAGACCACCCAAAGTGGGAAATACGACTCCATCGACAACACATCGC
GATCGTGGACGACTGTGGAAGCTGGCACCACTCATTCCCACAAAACTATT
GTACAAACCGCCCGACCCACCGGTACGTCCAACTGCGTCACTCACACAAG
CATCGCGTTCATCAAGGTGCACAAGTGTGGCTCTACTACACTCCAGAGAA
GCTTCCTCCGCTTCGGCTTCACCCATCGTCTGAACGTCGCGCTCCCCCGG
GGACGGGACTCCCCCACCATCGGGCACGACGGGCTCATCACGCGGGACGA
CTACGAACCGTCCCCGGGGGGAGCTCGGTGGGACATGTTCGCCCACCACG
GCACCTACAACCGAACCCAGCTTCTCCAACTGATGAAAAAAGACACTAAG
TTTATAACAGTGCTAAGAGAGCCTGTCTCTAGGTTGTTGTCAGCATTCCA
CTACTTTAGGATGGAAAGATACTTTCCGGGTCTTCTGAATGAAACAGGGC
AAGGCTCCCCTGTGATAACATATCTGGATGATGTGAAAAAATGGAACAGT
GTCTATGTCCCACCCAAGGATAGAGATTTCGCAGATCACATTTGCATCAG
GAATTGTATGTCAAGAGATCTTGGACTTCCTGAGGAAGATTTTGACAACA
GAACCGCCATTGACAAATTCATCCGTGGTATTGACCGAGACTTCTCATTG
GTCATGATCCTGGAGCATTTAGACCAATCGTTGATCCTGTTACGGCGGCG
CATGTGCTGGCTATTCGAGGATATTATTTACGACAATTTGTATTGGTCGA
GAAGGGCACGGTACAGAAAACGTGACGTCATCACAGAAGACAGACGACAA
AATTTCATTGAGGAAAATTATGCGGATTATTTGCTGTACAAACATTTCAA
AACGATTCTTTGGAGCAAAATCAAGAGAGAAGGGCCAGATTTTGACTTAG
AACTGCAACATTTCAGGAGAATAAACGCCGTTATAGGTAGAAACTGCCAC
ACAGTAACGAGACCGAAAAGTTTTATCCTGGGACCGAGTCGGTGGAATCA
AAGAATCCGCATCTACAACCATTTCTGCACCTTGATACGGCAAGAACGGT
TTTTCTGGGACCGGATGTTTCGCAAAAGATACAAAACTATGGAGAAAACT
AAACATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000235 | genome | Sc0000235:304786..308033 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96456_cuf4 |
| Biotype | protein_coding |
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