transcript:BL96461_cuf3 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96461_cuf3
Unique Nametranscript:BL96461_cuf3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96461_cuf3

>transcript:BL96461_cuf3-protein ID=transcript:BL96461_cuf3-protein|Name=transcript:BL96461_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=507bp
MAMGLGSQCWKRPIAVFLLVFALSVRCSTALSGSNVCYRRANYGCQEGYS
QRYTYGCFSPLTLFICIGYRTAYRAATCQRTEAVCCSGYIASGRRCVPSC
FSRASCPNGGSCTRTNYCSGCNDGYYSPRCDRCTQIAGCDDERCTTRYNQ
RCQRCNGDYGSLGRAYDNLGTSCREKCSWRTTRNNCYPGTCPTTPASCRC
TPGFGGSHCRTITSQPTNIYCLASLTSNLERVDASCDQSTVKYTNVVPTG
LNVTWSGNFTPSVPARPIYVKSFKVGIIGGGFAVSHYSKEPIRLVGGSSV
SEGRVEVYHDGQWGTVCDDGFDLNDANVVCRQLGYDSAAAARGSAAFGPG
SGRIWLDDVACGGSETTIGDCGHNGWGSHNCGHGEDAGVVCESIRLVGGS
SVSQGRVEVYHDGQWGTVCDDFFDLNDANVVCRQLGYDSATAARGSAAFG
QGSGQIWLSFMACEGYEATISDCGHSGWGSHSCSHREDAGVVCVDQPIRL
VGGSSVS
Run BLAST on NCBI

mRNA from alignment at Sc0000198:220967..233772-

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96461_cuf3 ID=transcript:BL96461_cuf3|Name=transcript:BL96461_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=12806bp|location=Sequence derived from alignment at Sc0000198:220967..233772- (Branchiostoma lanceolatum)
GGCTTTGCCTCAGGCCCTTCCTTTACCGAGAAAAACCGCATTTGCTGCAC GTTTTAGTCGACGTCATTGTTGTATTGCTGCTGACACAGCGAGGACGTAC ACGCAATCGGCGTTTCGTATGTGTCGGTAACAGGTCCTTTGCTGTTGAGG TACCGTGTTGTTCAAAAGTTTATATTTGAGTTCACCGGCGGATTGTTTCA TAAAGCGATTCACACATATCTTCATAACAAGACTGTGGACGACATACGGT CAGAACAACTCTCAGCCCTGCTACTTCAAGTGTGAAGTGTGCTCTGTAAG AAGGTAAAACTTCACTTGCGTCATTTCTCACTTGCGCTGAGTCATCTACT ATACATAGTGTGATGATAAATATTGAACCCATGCCAAACTATCATTACAT TGTTTTTAGCTGTTGAGATATCGCAGACCGAATCTCGCCGCGACCACTTG GCTGTTGTAATTTGAGTGTGTACGTGTACGTGTACGTGTACGTGTACGGG GTGTGCTGAAATCTAAAAGGTTCGCGGCTTCACCCGGAAACAAAGGGCAT AACTCAAATTTCGGCGCATAACTGTAAGGTATGAAGCCCTGACACAGATA AAAACACGCAACTTTACTAGTATAGCTTAATTTTGTCAAGTATATGTATA CTACCAGGCATGTAGTATGGATTAATTTTGTCAAGACCGTGGGCATGCTA GATTCCCCATGTTGACCCTACAAAGTGCTGAGTCTGTAACTCCAAATTTC AAATAATCGTCAGGATTTTCTTGCACGCAACGCCCTTTGACTGAAAATCA GCAATATTATGTGCGAGGGAGTGGAAAACATTAACAACTGTGCAGCGAGT AGCTGACGTGGTGTCGGGACTCATTTTGCTCTGCAGTCAGCTACACACTT CTTTCCAGTTAAAATACGAATGGGTCCTTCACCAAATATTTTCAGAATGT CCTCGTGTATTTCATGACATGACGAGCACCAGAAACGACCCGCAAGGCTC AGAACACAGGCCCTCGTTCCTTCCGTGTTTTGTCGCCTCGTCTACTGTTA AGGGGGCGTCGCCTGCAAAGAAATGGTCACAATGATTTGAGTTTTGTAGC AGGACTCGGATAGTAAGCTTTTTCACTTTATGGCCCGAAATTTTAGTTAT GACCCTTGTTTCGGGGTGAGGCCGCGAACGTTTTGAACGCCCCTCGTACA CAAGCGTGTTTTATCAAAGTAGTTGACAATGAGATCCTCTGTGTGACAGT TGCAATTTGTTTATTTAAAGTCTGAATAATTGAGACATTTTAGAGCCTAG GTCGATGTGATAGCATTGTGGAATCAGATAAGATAAATGTTATTTTATCA AAATCAGTAAGAGCAGAGGATGCCGGCCTTGATGTTAACTTCCGTGGCGT ACGTCATATTCATTAATCTCCAAGCTGTCTTCAGTACACTAGCACTTCCT ACCGCGCGGTAGCAAAAACTCTCGGCGTGGGCCAACTCCTGCAAAATTTC TTGGTCCTTTCTGGCAACTTTGACCTATCTTCCTTTTAGTGTCCCAGACG TGCCTAGGATTCAAATGCCAATTGTGGAACCGCGGACACACGCCACTGTC ACAAACAAACAAGCAAGCAAACACACCAGCTGACTACAAAACCTCCAAAG GGCCCGGGGCAAAACGTGCCTTGCACAAAGTTGGAGGTACACTTTGCCCC TGGCTCTTCCTTTACCGAGAAAAACTGTGCCTCTGGGAACGCCAAAATGT CCCTCGTATTAACGGGAGGCTGATCATGAATCCATTTCCTTCACCGAGAA TACCCATCACGTTGTCATATTGTCTCATTCGCATTATCTTGACACAGGCA ATGTCCAGGAGAGTGTTTTTTTCACACTTTTCGAAAGCCGCGTCGTAGTG TGATAGTAGGCTAAGATATAATTACTGGATTGTCAAAATCATTTTTGTAT ACACAGGCAATAGCAACTAGTTCCCACCATGCACCAGACTCCTTATTACA GATTAGCTTTTTGCCCCGGTGGGTGTTACCTGTAATGTGAAAACCATTGT TCTTGTTGTTGGAACCACTAATTCTACATTTCGGGAGGACCGGCTTTAAG CAAGCAATTCCTCGTAAAGATATTGAGATTCATTGATATCCGGTTACTCC CTTAGCCGTGTCAGGTGGCCTACGGTAAAGTGACGATTTTTTTGGCTGCT GATTTTCTTGAATATATCCCTATTTAGAGATGTCGATCTGTATATCTCTG CACTGTTTACTCCCTTTACAACCTAAAGAATATTTGAACATAACATTCTA TCTATCTATATATCTATCTATCTATCTATCTATCTATCTGTCCGTCCATC CATCCATCCATCCATCCATCCATCCATCCATCCATCCATCTATCTATCGG CCTTCAACAAGAGGAACACACTTCACTCCACATTGCCCTATCCAGCATCA TTTTCCTAAGTGTTCATATTCAATCCCAGTGTCTCTAACTAAACTGTCGG TAAAAGTCAAACTGCAGTGCACTCGGCCTCTTGGTTTCCATAGAAGGACG TCTGAAACTATTTGATGACTAAGGTAAATATAGCAGTTGTTGAGCACTGA GTTTGAAATCTGAGTAAGAAGAGTCCGGTTAGAATAGAGTTTTTCAATGA GCCCACTTAGGATCACTTAGCAGTTCAGACTGATAAGCACATCTTATGCC TCTTACAGCCTTGGCCCAAGCTAGGGGTCATCGTTGCACTGTTCGATGTA CGCTTTGCCCCGGGCCCTTGCTTTACCGAGAAAAACTGTGCCTCTGGGAA CGCCAACATTTCCCTCGTAATGAAGGAGAGCTGATCATGAAACCATTTCC TTTACCGAGAATACCGCCGTCACGTGGTCATGCTGTCTCCCGCGCATCGT CTGGGCCCAGACGATGACCCCAGGAGAGAAAATTTCTAACTTGTTGCTGT TGTTGGAACTACTCATTTTACAACAAGTCCTCGGTAAAGATGTTGAGATT TGTTGATACCAGTTACTCCCGTAACCGTGTCAGGTGGCATATACCGCTAT ATGGCAAAGTGACGATTTTTTTTTGCTGCTGATTTTCTTGAATAGATCCC TATTTAGAGATGTCAACCTGTCTAAGTCTGTGCCGTTTACTCCCTTTACA ACCCAAGGAATATTTGAACATAACCTTCTTGGCGAAGGTAAATATAGCGA TTGTTGAACCCTGGGTGTAACATCTGAGTAAGAAGAGTCCAGTTAGAACA GAATTCTTTAACGGGCCCACACAGCAGATCAGATTGATAAGGCTAAGCAC ATCTTATGCCTCTTACAGCCTTGGCCCAAGCTAGGGGTCATCATTGCAAA GTTCGATGTACGCTTTGCCCCGGGCCCTTCCTTTACCGAGAATACCGATC ACGTGGTGATGCTGTCTCCAACGCATTATCTTGGCCCAGATAATTCTGTA TACCCAGCATAAGGCAATGTATCAGCAGTGTGAACAAATAACTTGTTACA GATTAAGCGTTCATTTTTCAATGATTTGATAAATCTTACGTCTTCCCACA GTGATGGCAATGGGGCTGGGGTCACAGTGCTGGAAGCGCCCTATTGCAGT CTTCCTACTTGTTTTTGCTTTATCGGTCAGATGCAGCACTGCTTTAAGTG GGTAAGTTTTAGCGCACACCATTAGATAATGTACATGTTCTTGAAAGTAT GTTGCGATGTCGCACACATTGCCTAAGAGAGGATACACGATATGGTAAAA CGTATGAACCACCAGATGAAGATGTGCGCAAAGTAGTTGAAACATACACA TTGATACATAAGCCGGAATGCCTGACCAAAAGGCGGTCCGAATGATATAT TATTAATCGGACCGCCTTTTTCACAAAAATTGATTGTACGCCGCACGGTT GTCCATTAGACGGAACAAGGGGCGTTACCTCAGTCTCTTATCCCTTGTCT GTCTCTCTCTTCCAGGTCAAATGTCTGTTATCGTCGTGCTAACTACGGAT GTCAGGAGGGTTACAGCCAGAGATATACCTACGGGTGTTTCAGCCCACTC ACTTTGTTTATTTGCATTGGGTTCGTAATCTTTTATTAGAAATAATCTTA TCTTTCAGGTGTGGGTAGTATACATGTTTACTAAGATACTAAGATATGTT GTGCACGCATCAGTAAATGCATGTTAGTGTGGACATTGTCGCCTCAACAG CTCAATAGGTATGTACACTTGTGTAGAGTACCTTAGAATGCAAGTAATGT ACAATCGTCATCGAGTTTTTTTGCAGGTTTACACGTTGTGCTGATGGAAA TTGATGTTCTCAGTTGTCCCAGGGTTTTTGGCAGCGTTCAATAGGTTTTA CTGCCTTCGAGCAATCCGGGCCTACTGATCTTTAATGTACTCTTTATAAT AATTCAATTGGACTGATATTGGAGTAGATATTGGCGGGAGGGATTTTAAT TGTTTTGTGATGCCACTCAATATTTCCATCCGGTAGAAGTGGTAAAGCTA CAAGTCTGGGCTGCTGGACTTCATAAGCGTCTACCTTTGACCTAGCAGAA TCACATCATACTCTCGTCGGTAGAGAATGCCTGTAGTGTTTGTTCTTCTT TAAAGAAAACCCAAGCAATATAAGGGCCCGAAAATCGGATTTCGAAAGTC AATTTATTTTGTGATTTCTATACATGATAAGTTCAAACAACACTATCACA ATGTATAGCCACGTACATGATACCATATCGTTGTGATGTGAGAATTAAGT GAAAATCGTTTTTTGCGCGTTTTTAAAATGCTCAAAGTATGAAGTTATTA TGGAAATATGCTAAGCACTGTTAGTAAATGTCACTAGCAAAAAGATTTCA GCATCTTATTATTTCCATCTTTTTGGCCCTAATATTGCTTTGGTTGCCTT TAAAGCTGGAGGATTTTGTGATCTTCCCTGCATAATCTAGATACCGTTTT CAGCTACCGAACGGCATACCGAGCGGCAACCTGTCAACGCACCGAGGCTG TCTGTTGTTCCGGATACATCGCGAGTGGGAGGAGATGCGTTCGTAAGTAA ACTCCCAAGCATCTGATTCTGTATGTCTTAATCATATTGTCTAGTTGAAA ACTAAATATAACCAACGGTCAATAATTGTTATGAAAGTCACTTTTTACTT AGTACATGTATATAGCACGGTGCACGTGTATATAGATAACCTAAGCTAAG GAACCATAGACGGTTGGACCATTGTGAAGTAATTGTCAGTGTCCTTATAT TCCATGGTCCAGCTTCGTGTTTTAGCCGGGCATCCTGTCCCAACGGCGGA TCCTGTACTAGAACAAACTACTGTAGCGGCTGTAACGATGGCTACTATTC ACCGAGATGTGACCGTGAGTACTTCGGTCTCTTTTTACCCGTCCAGCATC AGTTAGAATCTTTTGTTAAGAGGTAAGCTGGGGTGAGAGTAACATGCCGC CGTTTACTTTGCCAAGTATGGGATAAAATGTAAAACAGTGATATCTAGAT CATATGTAGCTTTCGTAACGGCTTGTCCATTTCCTCGTGTAAGCTGTACA TGTTATGCTCAGTCAGAATGAAGTCGATTCTAGAAGATTGCGGTAAGCTG GAAAGCTACATATTCGCCTCTATTCTGCAGCTCAACATTCCAACTTTACC ATATTAAGACCTTCCTTTCTATCCATCTATCTTTCATATGGCTAATTGAC GTATTAAAGCAACAAACTGTACTTACAAAATGAGTCTTTTAGGATGCACC CAAATAGCTGGCTGCGATGATGAGAGATGCACGACCAGATACAACCAGCG ATGCCAACGATGCAACGGGGACTACGGAAGCTTAGGACGGGCCTATGATA ATCTCGGCACATCTTGCAGGGGTAAGCTATCAATACTAGATATTACTTTA GACGTCACATTACGCCACACCCTTGAAAAATATCACTCTTTACCTGATTA CCTTCGCCAAGAAGGTTATATTTTCGGCAGCGTTCGTGAGTCTGTGTGTC TGTCAACACGATGGCTCCAGAATGCCTGGGCGGATTGTGTTCAAACTTGG TACATGTATGTGGGTAGTTCTTGATGACACCTCAAAATCATTAGATTTTG GGCCCCCTAGCAGCTTGTTATATGTGACTTCGTGTTTTATACTCAGTTTG TTGTTTTTGTCCTCCATAAAGAGAAATGCTCCTGGAGAACAACCAGGAAC AACTGTTACCCAGGAACGTGCCCTACCACGCCAGCATCATGCAGATGTAC TCCGGGATTCGGAGGTAGCCATTGCAGGACAAGTACGTACGCGTATGCAA ATATCTTATTTAGTCCCAAATGATGAGCAATGCATTTTGTGATGCTACAT TTCTCTCTTTTACGATGTTGCACTATATCATGATGATGCCAGGTGGAACG GTACCTTGTAAGAATAACTCAAGGTAATTCGTGGCGAATCTCGGAAAAAG TATCAACTATTGCGTTATCTTTATCAGTTGTTTTGTTCTTTATATATAGT TCTACGTGATTGTGTCATGGTATATCTTATTTTTATGTGTGGGTCACGGC ACCAGCAATAGATGCCTGTGTCCCACGTGTATTGCAAGATGTACCGTTAG AATTCTAATCGAATCAAATAAAATCTCTACTTCGCGAGTGTTGGTTTTCT GTACCTGCAGTGTGAAAAGCAAGTAGCAGTGGATGTTTAGATGGCCGATT ATATTGACTAGCCTGGCTCACTGATGATTCATTTATATATAACAAGTTAA CAACAAACAGTTTTATGTACGGAGCCTACAGAGATTTTGATCAGTCTACT TATTCTCTGTTCCAGTAACCAGCCAGCCAACCAATATATACTGCCTTGCG TCCTTAACCAGCAACCTGGAACGAGTCGATGCTAGTTGTGACCAGTCAAC TGTGAAATACACCAACGTGGTCCCTACTGGTTTGAATGTAACATGGAGCG GGAATTTCACCCCGAGTGTTCCAGCTAGACCAATCTACGTGAAGAGCTTT AAAGTTGGAATAATTGGAGGAGGATTCGCTGTTTCACACTACTCTAAAGG TTAGACTGATTGCTCTTCCAGAACGTTTATTTTACATCATTCATTTCTTT ATTTCCCTTAAAGCACGAACAAAGTTTGTTACCTTCGCCAATAAGGTTAT GTTTTCAGTTGTGCCATGGTGGAGTGGCTATGGTGTTGGTGTGTCTGTAT GTCAACAGCATAACTCAAGAAGCTGTAGATGGATCTTCGTGATATTTGGT AGGTGAGTAGTGGTTGTAAAAACGAAGGTCAAGGTCGTAAATGGTTCACC TGACGTTCTCCTACGGTACTGCAGCGGGCTGTGTATGTATGTGTGTTTGT ATGTATATATGTATGACAACACAACACGAGAAGCTGCGAATGGTTCTACC AAGTGGATGTGCAAGGGTCGACAAAAGGAAGATCGAGTTCGATAATGGGC CACCTAGCGGGTACCTAAGGTACTGCAGCGGAGCATCAAAGTTTGAGGTC AAATTTTCTGCAAGTGCTACGGTCGGGATTTTTGTGTGGTAGATAGCTCT TGTCGCGTGGAGTAAGTTTTGGTCTCGGACCGGAGTTTCTTTTACGATTT AGTATGTAGGCCGACACCCTCAGGCCAATGGGCTACAATCCTGCCAAGAA AAGTAGGACGGAAAATCTAATTATTTCGGCGAAAAGCGGTTTGTTGGTGC AGATCGATACACACTCACTAAACGTCACTCACTCACTTATATACGAACCG GCACTCGCTCACTAACTAACTAAACTTTCTCGCCACCAGAACCCATCCGA CTCGTGGGCGGAAGTTCAGTCTCCGAAGGCAGGGTTGAAGTGTACCATGA CGGACAGTGGGGAACCGTCTGTGATGACTACTTTGACCTGAACGACGCCA ACGTGGTGTGCCGTCAGCTGGGGTACGACAGCGCTGCAGCGGCCCGAGGG TCAGCAGCCTTCGGGCAGGGGTCTGGCCGGATCTGGCTGTCCTACATGGC CTGTAGGGGCACCGAGACAACCATCAGTGATTGCGGCCACCGCGGATGGG GCTCACACCACTGTAGTCACAGGGAGGACGCTGGCGTGGTCTGCGCCGGT GGCCGTGAGTCTAGTGTTTTATGCATATGATGTGCAAAATAGTAAAAAAA AACCTTTGAACTTACCAACATGTCAGTTAAAACCCTGTGTCATCTTAAAG CTAGATATCAGTACCATACAAAGTAAGAAATTCAACAAATAATTACTTCT ACCAGCTCTCTCTCTCTCATACACACACACACACACACGGTCGCTCACTC ACTCTCTCAATCACACAAACTTACAGATCGACGCACATTCACTTACTAGT ATATACGAAACGCCACTCACTCACTCACTCACTCACACACACACTCACTC ACTAACAACCCTATGTGCTTACTTATGATAACCATTATGCATACACACAA TCACTAAATTTTACACGCACACGCACACACACACACACACACACACACGC ACGCACACACTCACTCGCTGCAAAGTCACAGATCGACACACACTCACTAA GCGTTGCTCACTCATTGTATACGAACCGGCACTCGCTTAACTAACTAAAA TTTCTCGCCACCAGAACCCATCCGACTCGTGGGCGGAAGTTCAGTCTCCG AAGGCAGGGTTGAAGTGTACCATGACGGACAGTGGGGAACCGTCTGTGAT GACGGCTTTGACCTGAACGACGCCAACGTGGTGTGCCGTCAGCTGGGGTA CGACAGCGCTGCAGCGGCCCGAGGGTCAGCAGCCTTCGGGCCGGGGTCCG GCCGGATCTGGCTGGACGACGTGGCCTGTGGGGGCTCCGAGACAACCATC GGTGATTGCGGCCACAACGGATGGGGCTCACACAACTGTGGACACGGGGA GGACGCTGGCGTGGTCTGCGGTAACCAAGAGCCTAGTGTTTTATGCATAT TATGTGCAAAATAGTAACATACCTTTGAACTTACCAACATGTCAGTTAAA ACCCTGTGTCATCTTAAAGATAGATATTAGTACCTTATAAAGTAAGAACT TCAACAAATAATTACTTCTACCAGTTCTCACACACACGGTCGCTCACACA CACGGTCGCTCACTCACTCTCTCAATCACACAAACTTGCAGATCGACACA CTCACATATAGACGAAACGGCACTCACGCACACATTCACTCGCTCACTCA CTCACTCACTCACTCACTCACATACACACACACACACACACACACACTCA CTTACACAAAGTCACAGATCAACACACACTTACTAAAGGTCACTCAATTA TATACGAACAGGCGCTCACTCATTAACTAACTAAATTTCTCGCCACCAGA ATCCATCCGACTCGTGGGCGGAAGTTCAGTCTCCCAAGGCAGGGTTGAAG TGTACCATGACGGACAGTGGGGAACCGTCTGTGATGACTTCTTTGACCTG AACGACGCCAACGTGGTGTGCCGTCAGCTGGGGTACGACAGCGCTACAGC GGCCCGAGGGTCAGCAGCCTTCGGGCAGGGGTCCGGCCAGATCTGGCTGT CCTTCATGGCCTGTGAGGGCTACGAAGCAACCATCAGTGATTGCGGCCAC AGCGGATGGGGCTCACACAGCTGTAGTCACAGGGAGGACGCTGGCGTGGT CTGTGTTGACCGTGAGTCTAGTGTTTTATGCATATGATGTGCAAAATAAG AAGTCTTTGAACCTTACAAATTAAGAATACTTACTTCTACATACACACGC ACACACACACACACACACACACACACACACACACACACATATACACACAA TCGCTCACTCACTCACTCTTTCAATCACACAAACTTACAGATCGACACAC ATTCACTTATAAGTTATATACGAAACGGCACTCAATCACTCACACTCACT CATTCAATCACTCACTAACAGCCCCATGTACTTAATTAATCCGCATGCAC AAAATCACTTAATTAAGTACACACACACACACACACACACACACACACAC ACACACACACACACACACACACTTACTCAGTCACTCACACAAAGTCACAC TTGTGTTTGTTCTTTGTACAAGGTGATTTGGAGTCCTTCTAGCTCTGTCT TGTCATTTAGTGGTAATCCGGAGAGCGCATCAGCCAGCAGCATCTCCTTT CCCGTTTTACATTTGATGGTGTAGTCATATGATTGTAGTCTTAGTAGCTG TCGCTGTAGCCGGGCAGGTGCCTTTGTGAGGTTTTTCTTGTCGATCTGTT CTATCGGACGGTGATCTGACTCTACCTTCTCACCGTATAGGTAAGTGTGG AATTTCTCGCACCCGTAGACTACTGCTAGTTACTCTCGATCTCTTTCGAT GTTAGCATATCTGGTTTCATCGACTGTAAGGGCCGCTTTGGAGGCGAACG CTATTGGTTTCCCCTGCGTCGACTTGGAGTGTTACAGGCTTGCCTTCGTT GTAATATTGAAGGGCTATTTCCTTACTGATAAGTTGTTTGATTTTGTTGA AATCTCGCGTGTGTGAAGTACACCAATCGAACTCAGTGTCATATTTCAGC AGTTCTCGAATGTTTGCAGTTTCATCATCCTCTTGTTCCTTCATCTGGTT GATAGCTTCAACTTTAACTGGATCGGGTTTCACTCCTGCTGCTGAGTAGA CCATTCCGAAAAAATTGCACTCGTCTTGCTTGATGATACACTTCTCTGCG TTGAGCTTGATACCTGATCTCCTTATCTTTTCCATGGCTTCATGCAAGTT TTAGTCATGTTCAACTTCATGTTTGCCATATACTTGGATATCATCTGCAG TCCCTACTGCACCTAAACACTCTCTGTATGCTTCATCTATGATCATCTAT TTGACGTTGGAACACATCCTGGCTGACCTTGAGGCCAAATGGAAGCCGGT TAAACCTGAACCTCCCAAATGCTGCGTTGAATGTCGTGAGCAAAGATGAC TCCTCATCAATTTTGATATTTCAATATCCGTAGCTAGCATCCAGCTAGCT GAACAGCTTAGACCCAGCTAGAGATGGTGTGATTTCTTCCTAGGTGGGCA TCGGATAGTGGTTTCTTTTCAGTGCGTTATTAAAGTCTCTTGGGTCGAGA CATATGCTGAGCTCGAGTTTTTGTTGGGTTTCTCTTTTGCGATGATTGGA TTCACCCAGTCGGTCGGCTGTGTTACCTCGCTGATGAAGCCTTTCTCTTG CATTTCTTCTAACTATTCCTTTAGCCTGTCTCTCAATTCTAGTAGAACTC CGCGAGGTGGATCGATGTACCACTAGTGCTGGTGTTGCATTAGGCTCAAT TGTAATGTGATATTCTACCTGGATGCAGCCTACAGTGTCGTCAAAGCACT CAGGTTACATCAAAATTAACTCTGCCTTCTTTTGATCGGTGGGCGATCTT GGATTCTGCTTCAGGCTTTTACTTCATGGTTGATAGTAATGATATCAGCT TTTGGCATGCACTTAGGCCAGGAATCGCAGGACCTTTTGACAGTGAGACG TAGAGAGAACATTTGACTCTCCTATCTTTGTGTTTACTCATACTGTAGTA TTGGCGCAATTTGCTCGGCTACGGTCTTCAGGAGGCGAGGCCGTGAGTAC CGTGCTGAATCACCGGATGTTTAGTCGAAAAGTACCACTGCCACCATATT TTGCTCTGATGTCTATGGATGCTTGATAATTACGTAAGATTCAAGTAGGA TAGACACGGCTATGAGAGTTGACTCTTTATTGTTGTGTAGTCTAGCAGCA TGCTGTGCGGAGTGATCTCAATAATAGTACAGTGCTTAGTGTAAAGTAGT CCGGGAAAGTAGGCCCCATAGTTGAAATGATCATTCTGCCTGATGAGATC ACGTAACATGACCAATTATCGTGCAGGACCAGTTATCGTCCAGTTTGTGT CATGTCCTCATGTCGAGGTGTATTATGCAAAAGCCTGTTCTCATGAGCAA TAAAGAACGTCATAAATATGATCCTTAGCCATCTCTCTCTTTTATCAAAC AAAGAAAAAGGTTTACGTCCAGCGACATAACAGAATAAACTCCTGAACCA GTATCAACAACTTGCACGGGAGCGTCAGGCATGACGTATTTCATATGTAA TTCGACACCGCGTGTTTTTCTAACTGACACGATAGCAGACATCTTTTAAA AGTAGCTGACGTTAAACCTTTCTTTGATATTTAAACTATCCATGGTGATT CGAGGTTTGAAACTCTTGCCAGTTTTAGGAAGGTTTGATACAACCTAGCG ACCCCCGCTGCGATGGTACATTTTTGGGACAAGCGGCGGGACAAACATAG TGACTTTATTATCATTTGTCTGTAGACTACTTTGGACAGTTACTGTGCAT TTTTTTCTGGTCTATGTTCTTCAAGCATAGCGCTAGAAGGGAAAAGACTG AAGTGGACGATAATATTAATGGGTAAGCCTAGCACAATTCTACATCATAT ACATCAGTATAAATACATGCTCGTACGCCGTTAAACAGGCGGAGAAAAAC TTACAGACCATGCATTTTTCTTTCTAGAAGAGCTTATATTTCTGCCCATG GGTTTAACATTTGGCTCTGTCAGCGCGGTTTTAAGATAAATGCGTTATGA ATAAATTGGACGATAATTGGTCATGTTACATTAAACAGATGATGTAACAC ACAGATCGACACACTCTCACCAAGGAGGTTTAATCTTGATTAAACCTCCT TGCTCTCACTTTAATATCATTATATACGAACCGGCACTCGCTTTATAACT AACTAAATTTCTCGCCACCAGAACCCATCCGACTCGTGGGCGGAAGTTCA GTCTCC

Coding sequence (CDS) from alignment at Sc0000198:220967..233772-

>transcript:BL96461_cuf3 ID=transcript:BL96461_cuf3|Name=transcript:BL96461_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1521bp|location=Sequence derived from alignment at Sc0000198:220967..233772- (Branchiostoma lanceolatum)
ATGGCAATGGGGCTGGGGTCACAGTGCTGGAAGCGCCCTATTGCAGTCTT
CCTACTTGTTTTTGCTTTATCGGTCAGATGCAGCACTGCTTTAAGTGGGT
CAAATGTCTGTTATCGTCGTGCTAACTACGGATGTCAGGAGGGTTACAGC
CAGAGATATACCTACGGGTGTTTCAGCCCACTCACTTTGTTTATTTGCAT
TGGCTACCGAACGGCATACCGAGCGGCAACCTGTCAACGCACCGAGGCTG
TCTGTTGTTCCGGATACATCGCGAGTGGGAGGAGATGCGTTCCTTCGTGT
TTTAGCCGGGCATCCTGTCCCAACGGCGGATCCTGTACTAGAACAAACTA
CTGTAGCGGCTGTAACGATGGCTACTATTCACCGAGATGTGACCGATGCA
CCCAAATAGCTGGCTGCGATGATGAGAGATGCACGACCAGATACAACCAG
CGATGCCAACGATGCAACGGGGACTACGGAAGCTTAGGACGGGCCTATGA
TAATCTCGGCACATCTTGCAGGGAGAAATGCTCCTGGAGAACAACCAGGA
ACAACTGTTACCCAGGAACGTGCCCTACCACGCCAGCATCATGCAGATGT
ACTCCGGGATTCGGAGGTAGCCATTGCAGGACAATAACCAGCCAGCCAAC
CAATATATACTGCCTTGCGTCCTTAACCAGCAACCTGGAACGAGTCGATG
CTAGTTGTGACCAGTCAACTGTGAAATACACCAACGTGGTCCCTACTGGT
TTGAATGTAACATGGAGCGGGAATTTCACCCCGAGTGTTCCAGCTAGACC
AATCTACGTGAAGAGCTTTAAAGTTGGAATAATTGGAGGAGGATTCGCTG
TTTCACACTACTCTAAAGAACCCATCCGACTCGTGGGCGGAAGTTCAGTC
TCCGAAGGCAGGGTTGAAGTGTACCATGACGGACAGTGGGGAACCGTCTG
TGATGACGGCTTTGACCTGAACGACGCCAACGTGGTGTGCCGTCAGCTGG
GGTACGACAGCGCTGCAGCGGCCCGAGGGTCAGCAGCCTTCGGGCCGGGG
TCCGGCCGGATCTGGCTGGACGACGTGGCCTGTGGGGGCTCCGAGACAAC
CATCGGTGATTGCGGCCACAACGGATGGGGCTCACACAACTGTGGACACG
GGGAGGACGCTGGCGTGGTCTGCGAATCCATCCGACTCGTGGGCGGAAGT
TCAGTCTCCCAAGGCAGGGTTGAAGTGTACCATGACGGACAGTGGGGAAC
CGTCTGTGATGACTTCTTTGACCTGAACGACGCCAACGTGGTGTGCCGTC
AGCTGGGGTACGACAGCGCTACAGCGGCCCGAGGGTCAGCAGCCTTCGGG
CAGGGGTCCGGCCAGATCTGGCTGTCCTTCATGGCCTGTGAGGGCTACGA
AGCAACCATCAGTGATTGCGGCCACAGCGGATGGGGCTCACACAGCTGTA
GTCACAGGGAGGACGCTGGCGTGGTCTGTGTTGACCAACCCATCCGACTC
GTGGGCGGAAGTTCAGTCTCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96461gene:BL96461Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96461_cuf3-E1BL96461_cuf3-E1-1564476830-382458Branchiostoma lanceolatumexon
BL96461_cuf3-E2BL96461_cuf3-E2-1564476830-382456Branchiostoma lanceolatumexon
BL96461_cuf3-E3BL96461_cuf3-E3-1564476830-382453Branchiostoma lanceolatumexon
BL96461_cuf3-E4BL96461_cuf3-E4-1564476830-382451Branchiostoma lanceolatumexon
BL96461_cuf3-E5BL96461_cuf3-E5-1564476830-382449Branchiostoma lanceolatumexon
BL96461_cuf3-E6BL96461_cuf3-E6-1564476830-382447Branchiostoma lanceolatumexon
BL96461_cuf3-E7BL96461_cuf3-E7-1564476830-382445Branchiostoma lanceolatumexon
BL96461_cuf3-E8BL96461_cuf3-E8-1564476830-382443Branchiostoma lanceolatumexon
BL96461_cuf3-E9BL96461_cuf3-E9-1564476830-382441Branchiostoma lanceolatumexon
BL96461_cuf3-E10BL96461_cuf3-E10-1564476830-382439Branchiostoma lanceolatumexon
BL96461_cuf3-E11BL96461_cuf3-E11-1564476830-382437Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96461_cuf3transcript:BL96461_cuf3-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000198genomeSc0000198:220967..233772 -
Properties
Property NameValue
Transcript idBL96461_cuf3
Biotypeprotein_coding