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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96469_cuf3 >transcript:BL96469_cuf3-protein ID=transcript:BL96469_cuf3-protein|Name=transcript:BL96469_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=179bp
VKKARGPRVNKGCYVAAKQIEVTFPERIDQFVSSVYRMYITPEAQQENAI
DDLEYHTAKYFSGEDMMPDYFENGTYGLFNCLLEGQSASLSGPAEYRPGT
ETPFSQTSFLEVTMSYNQLVSESVESLGDLPGQVAVDDDSREDIPGAVTD
KETGATGRSYERRIDSRLAVALENELEYV Run BLAST on NCBI mRNA from alignment at Sc0000045:809689..811454+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96469_cuf3 ID=transcript:BL96469_cuf3|Name=transcript:BL96469_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1766bp|location=Sequence derived from alignment at Sc0000045:809689..811454+ (Branchiostoma lanceolatum)
GGTCAAAAAAGCTAGAGGGCCTCGTGTGAACAAGGGCTGCTATGTGGCTG
CTAAACAAATTGAGGTAACATTCTTACTAGTGTTTAAAAAATCGATTTTC
ACACTTTTATACACGTCTATACATATCATGTGAGTTGCAGTTATATTTCT
ACACCTTATACATTTTTATTCCAAAGCAGTAAATGATTAGTAACATCAAG
TAAGTCAACATCAAGTGATATCAAACCATGGCAATTAAGTGTAGTTGAAG
GATAGCATCATTAAAAGATTCACGTATCAATCTGCAGTTCACTTGAAACC
TGCTAGAAGGTGCATTTGTATCTTGATTACATTCAGGTTCATCGTATACA
TGAACATTGTGATATATTCCAAAACCTGTACAAAAACTGCATGATTTTGG
ACTATGGTGCAGTGTACTGGATAAAGACACGTAAATCAACGATCATTCTC
AACCATGGTTTGATGTTTTGTCTCTTTGTAGGTGACTTTCCCCGAGCGCA
TTGACCAGTTTGTCTCCTCGGTGTATCGCATGTACATCACCCCAGAAGCT
CAACAGGAGAACGCCATTGATGACCTGGAGTACCACACCGCAAAATACTT
TTCAGTAAGTTTCATTGAGTATCTTTTTTGCTCCAATACTTACTCTGTCT
ACATGTTCCTTTCTTGCCACGGTAAGCTAAAGAAAGTATGACAAGAGATA
CCTATAGCTACCATTAAATTATAAATGTCGGAAGTTCCGCTGCAATACCG
TAGAAAGCCACTAGGAGTCCCATTATCAAACTTGATTTTCCTCATTTTCC
GAATCCGTATCCACCTACCAAATATCATACGGATCCATCCACAACTTCTC
AAGTTGTGCCATCAACAAATACACGGCTCCAACCAGTCACATACACGCAC
CGAAAACATACAATACATGTTATCTTCTAGGCAAAGGTAACTACAATCAA
ACCTGTACTACCACCTCTACATACGGACCATACCACCTGGCCAATATGAC
AACTTTTTGGTGGTCCTTTTGAACAATTTTGAAATTACTTTGTAAAATAT
GGTAAGTCAGACATTATTTCTTGAGAATATTGTAATTTCATTATATGTTT
TTTGTAAAAGATTCATTCATATATTTTTTCTATTTGCATACTAGGGCGAA
GACATGATGCCAGATTATTTTGAGAATGGCACCTATGGACTGTTCAATTG
CCTACTGGAGGGGCAGTCAGCATCACTGTCTGGGCCAGCCGAATACAGAC
CAGGCACAGAAACTCCCTTCTCTCAAACCAGCTTTCTGGAGGTCACAATG
AGCTACAACCAGTTGGTGTCCGAGTCGGTTGAGAGTCTGGGGGACTTGCC
TGGACAGGTGGCGGTTGACGATGACTCGAGGGAGGACATACCTGGCGCAG
TGACCGACAAAGAAACTGGCGCAACCGGACGGAGCTACGAACGCCGGATT
GACAGCCGGTTGGCTGTGGCTCTGGAAAATGAACTGGAATATGTTTAATT
AGTAAACACCATTATCTATATTGAACAATGGCATGCACTTGTTTGTGATA
AGGCAATGTTGATGTGATTATATGGATGACATCCGCGCGCGCATCAATTT
CGTCCGTTTCAAAAAAAAAATTTCAGCCATACTGTAAATCGTAATAGTAG
CTGCAAGGTGAGAAAATACATGATGTAAATTGAAAAAGATTCGGAAAACG
GATACTAATGTCATTAAATGCTTAAGTCAATTCCAACGTCAAATAAGAAG
TTTTGAAACAACAAAA Coding sequence (CDS) from alignment at Sc0000045:809689..811454+ >transcript:BL96469_cuf3 ID=transcript:BL96469_cuf3|Name=transcript:BL96469_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1620bp|location=Sequence derived from alignment at Sc0000045:809689..811454+ (Branchiostoma lanceolatum)
GTCAAAAAAGCTAGAGGGCCTCGTGTGAACAAGGGCTGCTATGTGGCTGC
TAAACAAATTGAGGTGACTTTCCCCGAGCGCATTGACCAGTTTGTCTCCT
CGGTGTATCGCATGTACATCACCCCAGAAGCTCAACAGGAGAACGCCATT
GATGACCTGGAGTACCACACCGCAAAATACTTTTCAGGCGAAGACATGAT
GCCAGATTATTTTGAGAATGGCACCTATGGACTGTTCAATTGCCTACTGG
AGGGGCAGTCAGCATCACTGTCTGGGCCAGCCGAATACAGACCAGGCACA
GAAACTCCCTTCTCTCAAACCAGCTTTCTGGAGGTCACAATGAGCTACAA
CCAGTTGGTGTCCGAGTCGGTTGAGAGTCTGGGGGACTTGCCTGGACAGG
TGGCGGTTGACGATGACTCGAGGGAGGACATACCTGGCGCAGTGACCGAC
AAAGAAACTGGCGCAACCGGACGGAGCTACGAACGCCGGATTGACAGCCG
GTTGGCTGTGGCTCTGGAAAATGAACTGGAATATGTTTAAGTCAAAAAAG
CTAGAGGGCCTCGTGTGAACAAGGGCTGCTATGTGGCTGCTAAACAAATT
GAGGTGACTTTCCCCGAGCGCATTGACCAGTTTGTCTCCTCGGTGTATCG
CATGTACATCACCCCAGAAGCTCAACAGGAGAACGCCATTGATGACCTGG
AGTACCACACCGCAAAATACTTTTCAGGCGAAGACATGATGCCAGATTAT
TTTGAGAATGGCACCTATGGACTGTTCAATTGCCTACTGGAGGGGCAGTC
AGCATCACTGTCTGGGCCAGCCGAATACAGACCAGGCACAGAAACTCCCT
TCTCTCAAACCAGCTTTCTGGAGGTCACAATGAGCTACAACCAGTTGGTG
TCCGAGTCGGTTGAGAGTCTGGGGGACTTGCCTGGACAGGTGGCGGTTGA
CGATGACTCGAGGGAGGACATACCTGGCGCAGTGACCGACAAAGAAACTG
GCGCAACCGGACGGAGCTACGAACGCCGGATTGACAGCCGGTTGGCTGTG
GCTCTGGAAAATGAACTGGAATATGTTTAAGTCAAAAAAGCTAGAGGGCC
TCGTGTGAACAAGGGCTGCTATGTGGCTGCTAAACAAATTGAGGTGACTT
TCCCCGAGCGCATTGACCAGTTTGTCTCCTCGGTGTATCGCATGTACATC
ACCCCAGAAGCTCAACAGGAGAACGCCATTGATGACCTGGAGTACCACAC
CGCAAAATACTTTTCAGGCGAAGACATGATGCCAGATTATTTTGAGAATG
GCACCTATGGACTGTTCAATTGCCTACTGGAGGGGCAGTCAGCATCACTG
TCTGGGCCAGCCGAATACAGACCAGGCACAGAAACTCCCTTCTCTCAAAC
CAGCTTTCTGGAGGTCACAATGAGCTACAACCAGTTGGTGTCCGAGTCGG
TTGAGAGTCTGGGGGACTTGCCTGGACAGGTGGCGGTTGACGATGACTCG
AGGGAGGACATACCTGGCGCAGTGACCGACAAAGAAACTGGCGCAACCGG
ACGGAGCTACGAACGCCGGATTGACAGCCGGTTGGCTGTGGCTCTGGAAA
ATGAACTGGAATATGTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000045 | genome | Sc0000045:809689..811454 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96469_cuf3 |
| Biotype | protein_coding |
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