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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96470_cuf0 >transcript:BL96470_cuf0-protein ID=transcript:BL96470_cuf0-protein|Name=transcript:BL96470_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=198bp
MEVVRVGMFYLVAIWLCVSSCAGQDDDPVVSTVTGQVRGTTTHTTDLPDK
PIYAFLGIPYAAPPVGELRYRPPQPALPWEGVREAVDYGSYCPQNLSVLN
QLDFPMEFGENMTMSEDCLTVNIFTPTVAADAALPVLLWIHGGGLSVFYG
SPPGWEALAAHQDVVVVSFNYRLGVLGFLSTGDENMPGNYGLLDQVSG Run BLAST on NCBI mRNA from alignment at Sc0000045:1808405..1810196+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96470_cuf0 ID=transcript:BL96470_cuf0|Name=transcript:BL96470_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1792bp|location=Sequence derived from alignment at Sc0000045:1808405..1810196+ (Branchiostoma lanceolatum)
GTCATTGTAGGCGTGCCGTAATTGTCCTGAACAACCGTGGAGTATGGAGG
TTGTTCGAGTTGGCATGTTTTACCTTGTAGCAATCTGGCTCTGTGTTTCT
TCATGTGGTAAGTGGTCACAGATATTGTGCATTGTTTTAGCTTGCTTTAG
TAGTAACTGCACCATGTCATATTGAGTCAATACGTACATATGCTGAAATC
GGTTCAAAACATATTGTGCCCCCCACCCCAATTTTACGACAGTACTCGGA
CGCAAACGTCACCGTAAATCCGTTAGGGGGTGGGGGGTTCGTGGAGAGGG
TGGAGGGGGTTAACAGTTACCTCATTGCCCATAAAAAAAAGTCCTAACGT
TGGCTGTGATTTAGAGAGAAATTGTTCCTCTTTTGGCAGGTAAGCACTTC
GAGTTGATACATACATATTCCATTGTTTACGGAAGTCATTTGATTTTTCA
TGTACCTCATGCTATAATATACAGAGACAGATGAGATAAGTCGTCAGACT
TCGTGATAATGAATTGGTCGATATTAGGTTCCATTTTTTTTAATACAAAT
ATCATAAACTCAACACCTGTGTGTAGACATCAAACGAAATGTTGGCTCCA
AAAGGTAGGGCAGGGGTCAAAGGTCATCTGGCCTAGGAAACTCGCAGCAC
TTTGACTGGCCTGAATTTATAGTTATGCTCATCACTGGTAGGAGACAAAA
CGTTATATAGAAACGTTTTAGACGTTACACAGTGATCAAATTGTCTTTTT
CTTAGGAGTTAAAGCCATCCGGGATGATGGTCCTGTCAACTTTGAGGTCT
TGAAACTCTTGTTGTATTAAAAACTGCTTTAAATCTTCCCCTACTTGGTG
CTACAGCCGGTCAGGATGACGATCCTGTTGTGTCCACGGTGACTGGACAA
GTCCGTGGAACAACCACCCACACAACCGACCTTCCCGACAAACCGATCTA
CGCTTTCCTGGGCATCCCGTACGCAGCGCCACCTGTTGGAGAACTCCGGT
ACCGCCCGCCCCAGCCTGCCCTCCCGTGGGAGGGAGTAAGGGAGGCCGTT
GATTACGGCTCTTACTGTCCCCAAAATCTTTCCGTACTTAACCAGCTTGA
CTTTCCTATGGAGTTTGGAGAGAACATGACCATGAGCGAGGACTGTCTGA
CAGTCAACATCTTCACTCCGACTGTAGCAGCGGACGCCGCTTTACCGGTA
ATTTTTTAACAGTATCCTATAAACAAAAAAGATAAAAGTAAACATTAGCT
GATATCATGGTACATCTTTCAATCAACTATACTTGCCTTCGTAAAAACCT
TGATCAGCAGCAACTTCGTTCTTGTATGTCAACGTGAATGCAGAATTAGA
CGGGAGAAATAGTTGAAAGAGAAAGGTTATTTTTTTCAATGTCATCCTTG
CAAATGAATATAGATATTACAGAAAAGTCATTTTCACCGCTCCTAAGTAT
GTTTCTCATGCAAATGCTTCCTGCACTTTACCATAATCCTTGGTAAATGA
TAAGTAATATGTGTATTGTTTAAAATGCATTCATCGGGGAAATGTAAACG
AGGATCACATCGCTTTTTCCTGATCTTTCGAATATTCCTTTTTTTTTTCA
CAGGTACTTTTGTGGATCCACGGGGGAGGTTTATCAGTCTTCTATGGTTC
ACCTCCTGGATGGGAGGCTCTTGCTGCTCACCAAGACGTCGTGGTGGTCT
CCTTCAACTACCGTCTCGGTGTGCTAGGTTTCCTCAGCACGGGAGACGAG
AACATGCCAGGAAACTACGGACTCCTGGACCAGGTCAGTGGC Coding sequence (CDS) from alignment at Sc0000045:1808405..1810196+ >transcript:BL96470_cuf0 ID=transcript:BL96470_cuf0|Name=transcript:BL96470_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=594bp|location=Sequence derived from alignment at Sc0000045:1808405..1810196+ (Branchiostoma lanceolatum)
ATGGAGGTTGTTCGAGTTGGCATGTTTTACCTTGTAGCAATCTGGCTCTG
TGTTTCTTCATGTGCCGGTCAGGATGACGATCCTGTTGTGTCCACGGTGA
CTGGACAAGTCCGTGGAACAACCACCCACACAACCGACCTTCCCGACAAA
CCGATCTACGCTTTCCTGGGCATCCCGTACGCAGCGCCACCTGTTGGAGA
ACTCCGGTACCGCCCGCCCCAGCCTGCCCTCCCGTGGGAGGGAGTAAGGG
AGGCCGTTGATTACGGCTCTTACTGTCCCCAAAATCTTTCCGTACTTAAC
CAGCTTGACTTTCCTATGGAGTTTGGAGAGAACATGACCATGAGCGAGGA
CTGTCTGACAGTCAACATCTTCACTCCGACTGTAGCAGCGGACGCCGCTT
TACCGGTACTTTTGTGGATCCACGGGGGAGGTTTATCAGTCTTCTATGGT
TCACCTCCTGGATGGGAGGCTCTTGCTGCTCACCAAGACGTCGTGGTGGT
CTCCTTCAACTACCGTCTCGGTGTGCTAGGTTTCCTCAGCACGGGAGACG
AGAACATGCCAGGAAACTACGGACTCCTGGACCAGGTCAGTGGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000045 | genome | Sc0000045:1808405..1810196 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96470_cuf0 |
| Biotype | protein_coding |
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