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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96471_cuf8 >transcript:BL96471_cuf8-protein ID=transcript:BL96471_cuf8-protein|Name=transcript:BL96471_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=137bp
METFGVHMFYFVIWLFISSYGAKTGQDDGLVVSTMTGQVRGTTTHTTDLP
DKPIYTFLGIPYAAPPVGELRYRPPQPALPWEGVRDAVEYGSYCPQNLLY
FNMIDFPIKLGGNMSMSEDCLTLNIFTPTAAIYTNLP Run BLAST on NCBI mRNA from alignment at Sc0000045:1846211..1847964+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96471_cuf8 ID=transcript:BL96471_cuf8|Name=transcript:BL96471_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=1754bp|location=Sequence derived from alignment at Sc0000045:1846211..1847964+ (Branchiostoma lanceolatum)
GAATTATTGTTTATTGATAGCTTCTCGTTACTGTTAGCTACGCCACAATT
GACTAAATGTTGGACATGATGAATAATGCAAATTTAATTAGTTTATTACT
CACTCTACAACTAATTTAGGCCAGTATTCTCTATTGAATGCTTGTGTAGC
ATCGTTGAATGGGTCCATCAGTCACGTATAATAGCAGTTACAAGAATATT
CCTCAAATAGTGACTTATTAAAAAAGGTAGCGAAATACGCACCTCCAAAT
TTTCGACGTCTTCTGTACGTCTTGTTCACGGAGTGACCTAGTCTCACGAG
AACACGAGACTAGGCCGAGACTTGTGAAGATCGTCCTCCTCTCTGCCTGT
CTCGTCGAAATAATGAGACTGAAAAAGTATATGTTATTGTCATGAGTGAA
AGAGGGCCCTTTTTGCAACCGCGTCGGCCTACATATAAACGTGCTTGAGA
TAAAGGGTAAACGTGCTTGAGATATTAAACAAACGAGTCAGTGACACTAA
GTACACAGTTCCCACGCACGGTGCTCTACATAACGACGGCTGACCGGGAC
CGGTATTGTTTACCTGTGGTAGCCGTGTCGAAGGTTCAGCATGGAAACCT
TCGGAGTTCATATGTTCTACTTTGTGATCTGGCTCTTCATTTCCTCTTAC
GGTAAGCGTTACTTAGCTTGTTTGTTTGCTTGTGAACACCCGCCGCAAAG
CCACACAAGTTAATGCAAATATTTCAATGTACCTCGTACAGTGAGACTTT
GAGCTTCGGATATTTTTCCTGTCAAAACTTGTTACTAGTAGTAAGCAATA
ATTACAGTAAGTTCAATGACATAAGTATGATTTTGTGTGTTCTGTTGAGA
ATTACTTACTTTTGTGCAGGTGCCCTCAACTTTATTTTTCCGATAAGAAA
AATTACTGATTAACAGATTCATGTAGAGCCTAGATTTTAAAACACTTGTT
AACTAATGTTTACCATATCTGATCAATATATTAGGATATGTCTTGAATAC
ATCCGAATTTATCCAAACCCATCGCACAGTATTTGGTTGATAAGGATGTT
TTCATCATTACCCAGTGTTCTTAATGTGTTGAAAAAGTACCAGACGTAAG
ATTACAACACCTGTGCAGGACTTGATAAAAAGAAATGGCGTCGGCGGGTC
AAAGGTCTCGGAATAAACCATTATCGGGTTGGGGTGAAGTCTCCTCCTTC
TTATTTGCCCGCAAGGTTATTTTGTTGTTCATGATTATAATTATGTAAAT
CATTACAGACGACCTTTTCATTGTGGCATATGGACTACCCTACGAGTAGT
ACTGGAAGACTTCATTTTTTTGTTTTTAGAAGTTTTTTTGGGGGGGAGGG
GGGAATTTTGCATGATTTCAAAAAACGATGTGCCCTACACCATTTCCATT
TAGGTGCCAAAACTGGTCAAGATGATGGCCTAGTTGTGTCTACTATGACA
GGACAAGTCCGTGGAACAACCACCCACACAACCGACCTTCCCGACAAACC
GATCTACACTTTCCTGGGCATCCCGTACGCAGCGCCACCTGTTGGAGAAC
TCCGGTACCGCCCGCCCCAGCCTGCCCTCCCGTGGGAGGGGGTCAGGGAT
GCCGTGGAATATGGTTCCTACTGTCCCCAAAACCTTTTGTATTTTAACAT
GATTGACTTTCCTATCAAACTTGGAGGGAACATGTCGATGAGCGAGGACT
GTCTGACACTTAATATCTTCACTCCGACTGCTGCAATATACACCAATTTA
CCGG Coding sequence (CDS) from alignment at Sc0000045:1846211..1847964+ >transcript:BL96471_cuf8 ID=transcript:BL96471_cuf8|Name=transcript:BL96471_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=411bp|location=Sequence derived from alignment at Sc0000045:1846211..1847964+ (Branchiostoma lanceolatum)
ATGGAAACCTTCGGAGTTCATATGTTCTACTTTGTGATCTGGCTCTTCAT
TTCCTCTTACGGTGCCAAAACTGGTCAAGATGATGGCCTAGTTGTGTCTA
CTATGACAGGACAAGTCCGTGGAACAACCACCCACACAACCGACCTTCCC
GACAAACCGATCTACACTTTCCTGGGCATCCCGTACGCAGCGCCACCTGT
TGGAGAACTCCGGTACCGCCCGCCCCAGCCTGCCCTCCCGTGGGAGGGGG
TCAGGGATGCCGTGGAATATGGTTCCTACTGTCCCCAAAACCTTTTGTAT
TTTAACATGATTGACTTTCCTATCAAACTTGGAGGGAACATGTCGATGAG
CGAGGACTGTCTGACACTTAATATCTTCACTCCGACTGCTGCAATATACA
CCAATTTACCG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000045 | genome | Sc0000045:1846211..1847964 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96471_cuf8 |
| Biotype | protein_coding |
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